RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 MAP3K19Q56UN5 1328 aa16.76■□□□□ 0.27
SRSF1-204ENST00000581979 IL2RBP14784 551 aa16.76■□□□□ 0.27
SRSF1-204ENST00000581979 FAM208AQ9UK61 1670 aaKnown RBP16.74■□□□□ 0.27
SRSF1-204ENST00000581979 PTF1AQ7RTS3 328 aa16.74■□□□□ 0.27
SRSF1-204ENST00000581979 HOXC9P31274 260 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 ZBED9Q6R2W3 1325 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 FBLN1P23142 703 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 MTHFSP49914 203 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
SRSF1-204ENST00000581979 RTL1A6NKG5 1358 aa16.72■□□□□ 0.27
SRSF1-204ENST00000581979 INSRP06213 1382 aa16.72■□□□□ 0.27
SRSF1-204ENST00000581979 AMPHP49418 695 aa16.71■□□□□ 0.27
SRSF1-204ENST00000581979 ADAMTS8Q9UP79 889 aa16.7■□□□□ 0.26
SRSF1-204ENST00000581979 MAP2P11137 1827 aaKnown RBP16.7■□□□□ 0.26
SRSF1-204ENST00000581979 LTV1Q96GA3 475 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-204ENST00000581979 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
SRSF1-204ENST00000581979 PROM2Q8N271 834 aa16.69■□□□□ 0.26
SRSF1-204ENST00000581979 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
SRSF1-204ENST00000581979 KIF24Q5T7B8 1368 aa16.68■□□□□ 0.26
SRSF1-204ENST00000581979 KCNQ2O43526 872 aa16.67■□□□□ 0.26
SRSF1-204ENST00000581979 SENP3-EIF4A1A0A087X0R7 540 aa16.67■□□□□ 0.26
SRSF1-204ENST00000581979 RGPD2P0DJD1 1756 aa16.66■□□□□ 0.26
SRSF1-204ENST00000581979 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
SRSF1-204ENST00000581979 FLT4P35916 1363 aa16.64■□□□□ 0.25
SRSF1-204ENST00000581979 NBPF6Q5VWK0 638 aa16.64■□□□□ 0.25
SRSF1-204ENST00000581979 ACSBG1Q96GR2 724 aa16.64■□□□□ 0.25
SRSF1-204ENST00000581979 NBPF4Q96M43 638 aa16.64■□□□□ 0.25
SRSF1-204ENST00000581979 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-204ENST00000581979 POLKQ9UBT6 870 aa16.64■□□□□ 0.25
SRSF1-204ENST00000581979 COL3A1P02461 1466 aaPredicted RBP16.64■□□□□ 0.25
SRSF1-204ENST00000581979 SMG6Q86US8 1419 aaKnown RBP16.63■□□□□ 0.25
SRSF1-204ENST00000581979 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
SRSF1-204ENST00000581979 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
SRSF1-204ENST00000581979 MEGF6O75095 1541 aa16.62■□□□□ 0.25
SRSF1-204ENST00000581979 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
SRSF1-204ENST00000581979 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
SRSF1-204ENST00000581979 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
SRSF1-204ENST00000581979 SALL2Q9Y467 1007 aaPredicted RBP16.62■□□□□ 0.25
SRSF1-204ENST00000581979 BTAF1O14981 1849 aa16.61■□□□□ 0.25
SRSF1-204ENST00000581979 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
SRSF1-204ENST00000581979 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
SRSF1-204ENST00000581979 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
SRSF1-204ENST00000581979 EMILIN1Q9Y6C2 1016 aa16.6■□□□□ 0.25
SRSF1-204ENST00000581979 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
SRSF1-204ENST00000581979 CASZ1Q86V15 1759 aa16.59■□□□□ 0.25
SRSF1-204ENST00000581979 U2SURPO15042 1029 aaKnown RBP16.59■□□□□ 0.25
SRSF1-204ENST00000581979 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
SRSF1-204ENST00000581979 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.254e-9■■□□□ 14.5
SRSF1-204ENST00000581979 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
SRSF1-204ENST00000581979 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
SRSF1-204ENST00000581979 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
SRSF1-204ENST00000581979 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
SRSF1-204ENST00000581979 STK32BQ9NY57 414 aa16.57■□□□□ 0.24
SRSF1-204ENST00000581979 GTF3C3Q9Y5Q9 886 aa16.57■□□□□ 0.24
SRSF1-204ENST00000581979 PAPPAQ13219 1627 aa16.57■□□□□ 0.24
SRSF1-204ENST00000581979 RUNDC1Q96C34 613 aa16.56■□□□□ 0.24
SRSF1-204ENST00000581979 NCAPD2Q15021 1401 aa16.56■□□□□ 0.24
SRSF1-204ENST00000581979 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-204ENST00000581979 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
SRSF1-204ENST00000581979 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-204ENST00000581979 PRIM1P49642 420 aaKnown RBP16.55■□□□□ 0.24
SRSF1-204ENST00000581979 APAF1O14727 1248 aa16.54■□□□□ 0.24
SRSF1-204ENST00000581979 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
SRSF1-204ENST00000581979 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
SRSF1-204ENST00000581979 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
SRSF1-204ENST00000581979 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
SRSF1-204ENST00000581979 SYTL4Q96C24 671 aaPredicted RBP16.53■□□□□ 0.24
SRSF1-204ENST00000581979 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
SRSF1-204ENST00000581979 IL13P35225 146 aa16.51■□□□□ 0.23
SRSF1-204ENST00000581979 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
SRSF1-204ENST00000581979 LY75O60449 1722 aa16.51■□□□□ 0.23
SRSF1-204ENST00000581979 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
SRSF1-204ENST00000581979 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 CYP27B1O15528 508 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 PTGER2P43116 358 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 EYA1Q99502 592 aa16.5■□□□□ 0.23
SRSF1-204ENST00000581979 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
SRSF1-204ENST00000581979 MTFR1LQ9H019 292 aa16.48■□□□□ 0.23
SRSF1-204ENST00000581979 FCHSD2O94868 740 aa16.48■□□□□ 0.23
SRSF1-204ENST00000581979 NEFMP07197 916 aa16.48■□□□□ 0.23
SRSF1-204ENST00000581979 EIF4A2Q14240 407 aaKnown RBP16.48■□□□□ 0.23
SRSF1-204ENST00000581979 PLEKHF1Q96S99 279 aa16.48■□□□□ 0.23
SRSF1-204ENST00000581979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.233e-19■■□□□ 14.5
SRSF1-204ENST00000581979 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
SRSF1-204ENST00000581979 NKX1-1Q15270 411 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-204ENST00000581979 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
SRSF1-204ENST00000581979 CDCA7LQ96GN5 454 aa16.47■□□□□ 0.23
SRSF1-204ENST00000581979 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
SRSF1-204ENST00000581979 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
SRSF1-204ENST00000581979 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
SRSF1-204ENST00000581979 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
SRSF1-204ENST00000581979 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
SRSF1-204ENST00000581979 HMOX1P09601 288 aa16.46■□□□□ 0.23
SRSF1-204ENST00000581979 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
SRSF1-204ENST00000581979 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
SRSF1-204ENST00000581979 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms