RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MAP3K19Q56UN5 1328 aa18.24■□□□□ 0.51
CSNK1D-220ENST00000581737 AMPHP49418 695 aa18.24■□□□□ 0.51
CSNK1D-220ENST00000581737 RGPD5Q99666 1765 aa18.23■□□□□ 0.51
CSNK1D-220ENST00000581737 FLT4P35916 1363 aa18.23■□□□□ 0.51
CSNK1D-220ENST00000581737 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 WNK3Q9BYP7 1800 aa18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 IP6K1Q92551 441 aa18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 STK32BQ9NY57 414 aa18.22■□□□□ 0.51
CSNK1D-220ENST00000581737 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.51
CSNK1D-220ENST00000581737 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
CSNK1D-220ENST00000581737 HOXC9P31274 260 aa18.2■□□□□ 0.5
CSNK1D-220ENST00000581737 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-220ENST00000581737 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
CSNK1D-220ENST00000581737 ACSBG1Q96GR2 724 aa18.19■□□□□ 0.5
CSNK1D-220ENST00000581737 MTFR1LQ9H019 292 aa18.19■□□□□ 0.5
CSNK1D-220ENST00000581737 EXOC5O00471 708 aa18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 FBLN1P23142 703 aa18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 EMILIN1Q9Y6C2 1016 aa18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 ERBB3P21860 1342 aa18.18■□□□□ 0.5
CSNK1D-220ENST00000581737 INSRP06213 1382 aa18.17■□□□□ 0.5
CSNK1D-220ENST00000581737 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-220ENST00000581737 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
CSNK1D-220ENST00000581737 CCER2I3L3R5 266 aa18.16■□□□□ 0.5
CSNK1D-220ENST00000581737 ANKRD24Q8TF21 1146 aa18.16■□□□□ 0.5
CSNK1D-220ENST00000581737 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
CSNK1D-220ENST00000581737 SENP3-EIF4A1A0A087X0R7 540 aa18.15■□□□□ 0.5
CSNK1D-220ENST00000581737 RALBP1Q15311 655 aa18.15■□□□□ 0.5
CSNK1D-220ENST00000581737 ARXQ96QS3 562 aa18.15■□□□□ 0.5
CSNK1D-220ENST00000581737 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
CSNK1D-220ENST00000581737 C1QTNF8P60827 252 aa18.14■□□□□ 0.49
CSNK1D-220ENST00000581737 LRRC4BQ9NT99 713 aa18.14■□□□□ 0.49
CSNK1D-220ENST00000581737 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
CSNK1D-220ENST00000581737 LTV1Q96GA3 475 aaPredicted RBP18.12■□□□□ 0.49
CSNK1D-220ENST00000581737 NHSQ6T4R5 1651 aa18.12■□□□□ 0.49
CSNK1D-220ENST00000581737 CEP350Q5VT06 3117 aa18.11■□□□□ 0.49
CSNK1D-220ENST00000581737 MTHFSP49914 203 aa18.11■□□□□ 0.49
CSNK1D-220ENST00000581737 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
CSNK1D-220ENST00000581737 PPP2R1AP30153 589 aa18.1■□□□□ 0.49
CSNK1D-220ENST00000581737 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
CSNK1D-220ENST00000581737 MAP3K5Q99683 1374 aa18.09■□□□□ 0.49
CSNK1D-220ENST00000581737 RGPD2P0DJD1 1756 aa18.08■□□□□ 0.48
CSNK1D-220ENST00000581737 MYBBP1AQ9BQG0 1328 aaKnown RBP18.07■□□□□ 0.48
CSNK1D-220ENST00000581737 KCNQ4P56696 695 aa18.07■□□□□ 0.48
CSNK1D-220ENST00000581737 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
CSNK1D-220ENST00000581737 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
CSNK1D-220ENST00000581737 IL2RBP14784 551 aa18.06■□□□□ 0.48
CSNK1D-220ENST00000581737 EIF4A2Q14240 407 aaKnown RBP18.06■□□□□ 0.48
CSNK1D-220ENST00000581737 GPR162Q16538 588 aa18.06■□□□□ 0.48
CSNK1D-220ENST00000581737 NLGN2Q8NFZ4 835 aa18.05■□□□□ 0.48
CSNK1D-220ENST00000581737 COL3A1P02461 1466 aaPredicted RBP18.05■□□□□ 0.48
CSNK1D-220ENST00000581737 DIAPH1O60610 1272 aaKnown RBP18.04■□□□□ 0.48
CSNK1D-220ENST00000581737 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
CSNK1D-220ENST00000581737 BTAF1O14981 1849 aa18.04■□□□□ 0.48
CSNK1D-220ENST00000581737 NCAPD2Q15021 1401 aa18.04■□□□□ 0.48
CSNK1D-220ENST00000581737 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
CSNK1D-220ENST00000581737 NBPF6Q5VWK0 638 aa18.03■□□□□ 0.48
CSNK1D-220ENST00000581737 NBPF4Q96M43 638 aa18.03■□□□□ 0.48
CSNK1D-220ENST00000581737 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
CSNK1D-220ENST00000581737 IL13P35225 146 aa18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 EYA1Q99502 592 aa18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
CSNK1D-220ENST00000581737 CHD4Q14839 1912 aa18■□□□□ 0.47
CSNK1D-220ENST00000581737 DDX54Q8TDD1 881 aaKnown RBP18■□□□□ 0.47
CSNK1D-220ENST00000581737 YTHDC1Q96MU7 727 aaKnown RBP18■□□□□ 0.47
CSNK1D-220ENST00000581737 GIGYF1O75420 1035 aaPredicted RBP17.98■□□□□ 0.47
CSNK1D-220ENST00000581737 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■□□□□ 10.5
CSNK1D-220ENST00000581737 USHBP1Q8N6Y0 703 aa17.98■□□□□ 0.47
CSNK1D-220ENST00000581737 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
CSNK1D-220ENST00000581737 KDRP35968 1356 aa17.97■□□□□ 0.47
CSNK1D-220ENST00000581737 TATP17735 454 aaPredicted RBP17.97■□□□□ 0.47
CSNK1D-220ENST00000581737 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
CSNK1D-220ENST00000581737 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
CSNK1D-220ENST00000581737 MEGF6O75095 1541 aa17.97■□□□□ 0.47
CSNK1D-220ENST00000581737 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
CSNK1D-220ENST00000581737 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
CSNK1D-220ENST00000581737 POLD1P28340 1107 aa17.96■□□□□ 0.47
CSNK1D-220ENST00000581737 PRIM1P49642 420 aaKnown RBP17.96■□□□□ 0.47
CSNK1D-220ENST00000581737 SLC27A3Q5K4L6 730 aa17.96■□□□□ 0.47
CSNK1D-220ENST00000581737 SYTL4Q96C24 671 aaPredicted RBP17.95■□□□□ 0.46
CSNK1D-220ENST00000581737 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
CSNK1D-220ENST00000581737 IFFO2Q5TF58 517 aa17.94■□□□□ 0.46
CSNK1D-220ENST00000581737 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
CSNK1D-220ENST00000581737 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
CSNK1D-220ENST00000581737 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
CSNK1D-220ENST00000581737 ZCRB1Q8TBF4 217 aaKnown RBP17.92■□□□□ 0.46
CSNK1D-220ENST00000581737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
CSNK1D-220ENST00000581737 QSER1Q2KHR3 1735 aa17.92■□□□□ 0.46
CSNK1D-220ENST00000581737 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-220ENST00000581737 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.462e-6■■□□□ 12.1
CSNK1D-220ENST00000581737 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
CSNK1D-220ENST00000581737 SPG7Q9UQ90 795 aa17.91■□□□□ 0.46
CSNK1D-220ENST00000581737 HMOX1P09601 288 aa17.9■□□□□ 0.46
CSNK1D-220ENST00000581737 MSL1Q68DK7 614 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms