RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-220ENST00000581160 TMPOP42166 694 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-220ENST00000581160 NFE2L2Q16236 605 aa12.09□□□□□ -0.47
CDK5RAP3-220ENST00000581160 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-220ENST00000581160 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-220ENST00000581160 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
CDK5RAP3-220ENST00000581160 SPG7Q9UQ90 795 aa12.08□□□□□ -0.48
CDK5RAP3-220ENST00000581160 ATRNO75882 1429 aa12.08□□□□□ -0.48
CDK5RAP3-220ENST00000581160 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-220ENST00000581160 RIPK4P57078 832 aa12.07□□□□□ -0.48
CDK5RAP3-220ENST00000581160 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDK5RAP3-220ENST00000581160 ZCRB1Q8TBF4 217 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-220ENST00000581160 DISP2A7MBM2 1401 aa12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 EXOC5O00471 708 aa12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 NEUROD2Q15784 382 aa12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 CCDC27Q2M243 656 aa12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 RRP7AQ9Y3A4 280 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 MEGF6O75095 1541 aa12.06□□□□□ -0.48
CDK5RAP3-220ENST00000581160 OVOS2A0A0G2JMS6 1433 aa12.05□□□□□ -0.48
CDK5RAP3-220ENST00000581160 AKAP4Q5JQC9 854 aa12.05□□□□□ -0.48
CDK5RAP3-220ENST00000581160 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-220ENST00000581160 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
CDK5RAP3-220ENST00000581160 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 GNAT3A8MTJ3 354 aa12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 FAM98CQ17RN3 349 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 SALL2Q9Y467 1007 aaPredicted RBP12.04□□□□□ -0.48
CDK5RAP3-220ENST00000581160 PHKG2P15735 406 aa12.03□□□□□ -0.48
CDK5RAP3-220ENST00000581160 DDB1Q16531 1140 aa12.03□□□□□ -0.48
CDK5RAP3-220ENST00000581160 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
CDK5RAP3-220ENST00000581160 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
CDK5RAP3-220ENST00000581160 PARP4Q9UKK3 1724 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-220ENST00000581160 CYP27B1O15528 508 aa12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 HSP90AB1P08238 724 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 WDR63Q8IWG1 891 aa12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 RTF1Q92541 710 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
CDK5RAP3-220ENST00000581160 GLI3P10071 1580 aa12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 RXRBP28702 533 aa12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 IL17REQ8NFR9 667 aa12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 ZNF521Q96K83 1311 aa12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
CDK5RAP3-220ENST00000581160 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 RNMTO43148 476 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 PDE3BQ13370 1112 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 POTEAQ6S8J7 498 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 DCAF5Q96JK2 942 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 LGR6Q9HBX8 967 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 WNK3Q9BYP7 1800 aa12□□□□□ -0.49
CDK5RAP3-220ENST00000581160 CALD1Q05682 793 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 DCTN1Q14203 1278 aa11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 MCM10Q7L590 875 aa11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 DLG5Q8TDM6 1919 aa11.99□□□□□ -0.49
CDK5RAP3-220ENST00000581160 TNS2Q63HR2 1409 aa11.98□□□□□ -0.49
CDK5RAP3-220ENST00000581160 IL16Q14005 1332 aa11.98□□□□□ -0.49
CDK5RAP3-220ENST00000581160 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
CDK5RAP3-220ENST00000581160 THSD7AQ9UPZ6 1657 aa11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 A0A0G2JS52 829 aa11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 ERVV-2B6SEH9 535 aa11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 MYT1Q01538 1121 aa11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-220ENST00000581160 ZNF853P0CG23 659 aa11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 TAF7Q15545 349 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 TRMT2AQ8IZ69 625 aaKnown RBP11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 BABAM1Q9NWV8 329 aa11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.49
CDK5RAP3-220ENST00000581160 E9PSI1 815 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 GNAI1P63096 354 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 IFT57Q9NWB7 429 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 LRRC37A3O60309 1634 aa11.95□□□□□ -0.5
CDK5RAP3-220ENST00000581160 KDM6AO15550 1401 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 CHL1O00533 1208 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 CABP4P57796 275 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 TEFQ10587 303 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 SLC52A2Q9HAB3 445 aa11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-220ENST00000581160 MYH16Q9H6N6 1097 aa11.93□□□□□ -0.5
CDK5RAP3-220ENST00000581160 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-220ENST00000581160 BCL9O00512 1426 aa11.93□□□□□ -0.5
CDK5RAP3-220ENST00000581160 SCN11AQ9UI33 1791 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms