RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
CBX1-206ENST00000581003 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
CBX1-206ENST00000581003 PROM2Q8N271 834 aa17.29■□□□□ 0.36
CBX1-206ENST00000581003 ANO8Q9HCE9 1232 aaPredicted RBP17.29■□□□□ 0.36
CBX1-206ENST00000581003 BTAF1O14981 1849 aa17.28■□□□□ 0.36
CBX1-206ENST00000581003 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
CBX1-206ENST00000581003 NSD2O96028 1365 aa17.28■□□□□ 0.36
CBX1-206ENST00000581003 CNGB1Q14028 1251 aaPredicted RBP17.27■□□□□ 0.36
CBX1-206ENST00000581003 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
CBX1-206ENST00000581003 MORC1Q86VD1 984 aa17.27■□□□□ 0.36
CBX1-206ENST00000581003 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
CBX1-206ENST00000581003 EYA1Q99502 592 aa17.26■□□□□ 0.35
CBX1-206ENST00000581003 KNSTRNQ9Y448 316 aa17.26■□□□□ 0.35
CBX1-206ENST00000581003 PLSCR1O15162 318 aa17.25■□□□□ 0.35
CBX1-206ENST00000581003 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
CBX1-206ENST00000581003 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
CBX1-206ENST00000581003 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
CBX1-206ENST00000581003 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
CBX1-206ENST00000581003 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
CBX1-206ENST00000581003 TXNRD1Q16881 649 aa17.23■□□□□ 0.35
CBX1-206ENST00000581003 CC2D1BQ5T0F9 858 aaKnown RBP17.23■□□□□ 0.35
CBX1-206ENST00000581003 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
CBX1-206ENST00000581003 LRP5O75197 1615 aa17.22■□□□□ 0.35
CBX1-206ENST00000581003 CYP27B1O15528 508 aa17.22■□□□□ 0.35
CBX1-206ENST00000581003 PRIM1P49642 420 aaKnown RBP17.22■□□□□ 0.35
CBX1-206ENST00000581003 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
CBX1-206ENST00000581003 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
CBX1-206ENST00000581003 KCNQ4P56696 695 aa17.21■□□□□ 0.35
CBX1-206ENST00000581003 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
CBX1-206ENST00000581003 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
CBX1-206ENST00000581003 LRRC4BQ9NT99 713 aa17.19■□□□□ 0.34
CBX1-206ENST00000581003 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
CBX1-206ENST00000581003 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
CBX1-206ENST00000581003 CASZ1Q86V15 1759 aa17.17■□□□□ 0.34
CBX1-206ENST00000581003 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
CBX1-206ENST00000581003 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
CBX1-206ENST00000581003 MTHFSP49914 203 aa17.15■□□□□ 0.34
CBX1-206ENST00000581003 LY75O60449 1722 aa17.14■□□□□ 0.33
CBX1-206ENST00000581003 IL13P35225 146 aa17.14■□□□□ 0.33
CBX1-206ENST00000581003 COL3A1P02461 1466 aaPredicted RBP17.13■□□□□ 0.33
CBX1-206ENST00000581003 PHKG2P15735 406 aa17.12■□□□□ 0.33
CBX1-206ENST00000581003 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
CBX1-206ENST00000581003 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
CBX1-206ENST00000581003 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
CBX1-206ENST00000581003 ITGB4P16144 1822 aa17.12■□□□□ 0.33
CBX1-206ENST00000581003 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
CBX1-206ENST00000581003 SULT6B1Q6IMI4 303 aa17.11■□□□□ 0.33
CBX1-206ENST00000581003 STK32BQ9NY57 414 aa17.11■□□□□ 0.33
CBX1-206ENST00000581003 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
CBX1-206ENST00000581003 TUBGCP6Q96RT7 1819 aa17.1■□□□□ 0.33
CBX1-206ENST00000581003 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
CBX1-206ENST00000581003 HMOX1P09601 288 aa17.09■□□□□ 0.33
CBX1-206ENST00000581003 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
CBX1-206ENST00000581003 PIGBQ92521 554 aa17.09■□□□□ 0.33
CBX1-206ENST00000581003 KDRP35968 1356 aa17.09■□□□□ 0.33
CBX1-206ENST00000581003 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
CBX1-206ENST00000581003 PALLDQ8WX93 1383 aa17.08■□□□□ 0.32
CBX1-206ENST00000581003 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
CBX1-206ENST00000581003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.321e-7■■□□□ 11.7
CBX1-206ENST00000581003 CCNL1Q9UK58 526 aaPredicted RBP17.08■□□□□ 0.32
CBX1-206ENST00000581003 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
CBX1-206ENST00000581003 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
CBX1-206ENST00000581003 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
CBX1-206ENST00000581003 C5P01031 1676 aa17.06■□□□□ 0.32
CBX1-206ENST00000581003 SLC27A3Q5K4L6 730 aa17.05■□□□□ 0.32
CBX1-206ENST00000581003 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
CBX1-206ENST00000581003 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
CBX1-206ENST00000581003 SMIM5Q71RC9 77 aa17.04■□□□□ 0.32
CBX1-206ENST00000581003 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
CBX1-206ENST00000581003 PTGER2P43116 358 aa17.03■□□□□ 0.32
CBX1-206ENST00000581003 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
CBX1-206ENST00000581003 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
CBX1-206ENST00000581003 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CBX1-206ENST00000581003 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
CBX1-206ENST00000581003 PPP2R1AP30153 589 aa17.02■□□□□ 0.32
CBX1-206ENST00000581003 PLEKHG2Q9H7P9 1386 aa17.02■□□□□ 0.31
CBX1-206ENST00000581003 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
CBX1-206ENST00000581003 U2SURPO15042 1029 aaKnown RBP17.01■□□□□ 0.31
CBX1-206ENST00000581003 ATG3Q9NT62 314 aa17.01■□□□□ 0.31
CBX1-206ENST00000581003 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
CBX1-206ENST00000581003 C4BP0C0L5 1744 aa17■□□□□ 0.31
CBX1-206ENST00000581003 TFCP2L1Q9NZI6 479 aa17■□□□□ 0.31
CBX1-206ENST00000581003 ITPK1Q13572 414 aa16.99■□□□□ 0.31
CBX1-206ENST00000581003 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
CBX1-206ENST00000581003 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
CBX1-206ENST00000581003 SGIP1Q9BQI5 828 aa16.99■□□□□ 0.31
CBX1-206ENST00000581003 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
CBX1-206ENST00000581003 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
CBX1-206ENST00000581003 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
CBX1-206ENST00000581003 MTFR1LQ9H019 292 aa16.98■□□□□ 0.31
CBX1-206ENST00000581003 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
CBX1-206ENST00000581003 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
CBX1-206ENST00000581003 SIK1P57059 783 aa16.97■□□□□ 0.31
CBX1-206ENST00000581003 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
CBX1-206ENST00000581003 COL23A1Q86Y22 540 aaPredicted RBP16.97■□□□□ 0.31
CBX1-206ENST00000581003 LGR6Q9HBX8 967 aa16.97■□□□□ 0.31
CBX1-206ENST00000581003 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
CBX1-206ENST00000581003 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
CBX1-206ENST00000581003 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
CBX1-206ENST00000581003 CABP4P57796 275 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms