RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 ACSBG1Q96GR2 724 aa16.7■□□□□ 0.26
PSMD3-205ENST00000580980 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
PSMD3-205ENST00000580980 ANKRD26Q9UPS8 1709 aa16.7■□□□□ 0.26
PSMD3-205ENST00000580980 TXNRD1Q16881 649 aa16.69■□□□□ 0.26
PSMD3-205ENST00000580980 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
PSMD3-205ENST00000580980 LRP5O75197 1615 aa16.69■□□□□ 0.26
PSMD3-205ENST00000580980 RGPD2P0DJD1 1756 aa16.69■□□□□ 0.26
PSMD3-205ENST00000580980 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
PSMD3-205ENST00000580980 NCAPD2Q15021 1401 aa16.67■□□□□ 0.26
PSMD3-205ENST00000580980 MORC1Q86VD1 984 aa16.66■□□□□ 0.26
PSMD3-205ENST00000580980 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
PSMD3-205ENST00000580980 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
PSMD3-205ENST00000580980 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
PSMD3-205ENST00000580980 EYA1Q99502 592 aa16.65■□□□□ 0.26
PSMD3-205ENST00000580980 SRCAPQ6ZRS2 3230 aa16.64■□□□□ 0.25
PSMD3-205ENST00000580980 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
PSMD3-205ENST00000580980 PRIM1P49642 420 aaKnown RBP16.63■□□□□ 0.25
PSMD3-205ENST00000580980 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
PSMD3-205ENST00000580980 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
PSMD3-205ENST00000580980 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
PSMD3-205ENST00000580980 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
PSMD3-205ENST00000580980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.63■□□□□ 0.25
PSMD3-205ENST00000580980 PLEKHG2Q9H7P9 1386 aa16.63■□□□□ 0.25
PSMD3-205ENST00000580980 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
PSMD3-205ENST00000580980 SLC27A3Q5K4L6 730 aa16.62■□□□□ 0.25
PSMD3-205ENST00000580980 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
PSMD3-205ENST00000580980 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
PSMD3-205ENST00000580980 BTAF1O14981 1849 aa16.61■□□□□ 0.25
PSMD3-205ENST00000580980 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
PSMD3-205ENST00000580980 CYP27B1O15528 508 aa16.59■□□□□ 0.25
PSMD3-205ENST00000580980 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
PSMD3-205ENST00000580980 SPON1Q9HCB6 807 aa16.59■□□□□ 0.25
PSMD3-205ENST00000580980 IGSF1Q8N6C5 1336 aa16.59■□□□□ 0.25
PSMD3-205ENST00000580980 PKD1L3Q7Z443 1732 aa16.58■□□□□ 0.24
PSMD3-205ENST00000580980 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
PSMD3-205ENST00000580980 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
PSMD3-205ENST00000580980 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
PSMD3-205ENST00000580980 LRRC4BQ9NT99 713 aa16.57■□□□□ 0.24
PSMD3-205ENST00000580980 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
PSMD3-205ENST00000580980 PAPPAQ13219 1627 aa16.55■□□□□ 0.24
PSMD3-205ENST00000580980 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
PSMD3-205ENST00000580980 PHKG2P15735 406 aa16.54■□□□□ 0.24
PSMD3-205ENST00000580980 CASZ1Q86V15 1759 aa16.54■□□□□ 0.24
PSMD3-205ENST00000580980 IL13P35225 146 aa16.53■□□□□ 0.24
PSMD3-205ENST00000580980 MTHFSP49914 203 aa16.53■□□□□ 0.24
PSMD3-205ENST00000580980 AMOTQ4VCS5 1084 aa16.53■□□□□ 0.24
PSMD3-205ENST00000580980 PLEKHO1Q53GL0 409 aaPredicted RBP16.53■□□□□ 0.24
PSMD3-205ENST00000580980 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
PSMD3-205ENST00000580980 MPRIPQ6WCQ1 1025 aa16.53■□□□□ 0.24
PSMD3-205ENST00000580980 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
PSMD3-205ENST00000580980 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
PSMD3-205ENST00000580980 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.24
PSMD3-205ENST00000580980 PDGFDQ9GZP0 370 aaPredicted RBP16.52■□□□□ 0.24
PSMD3-205ENST00000580980 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
PSMD3-205ENST00000580980 LY75O60449 1722 aa16.51■□□□□ 0.23
PSMD3-205ENST00000580980 MTFR1LQ9H019 292 aa16.51■□□□□ 0.23
PSMD3-205ENST00000580980 KDRP35968 1356 aa16.51■□□□□ 0.23
PSMD3-205ENST00000580980 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
PSMD3-205ENST00000580980 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
PSMD3-205ENST00000580980 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
PSMD3-205ENST00000580980 PALLDQ8WX93 1383 aa16.5■□□□□ 0.23
PSMD3-205ENST00000580980 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
PSMD3-205ENST00000580980 SLC16A10Q8TF71 515 aa16.49■□□□□ 0.23
PSMD3-205ENST00000580980 PIGBQ92521 554 aa16.49■□□□□ 0.23
PSMD3-205ENST00000580980 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
PSMD3-205ENST00000580980 KCNQ4P56696 695 aa16.48■□□□□ 0.23
PSMD3-205ENST00000580980 AEBP1Q8IUX7 1158 aa16.48■□□□□ 0.23
PSMD3-205ENST00000580980 DCAF5Q96JK2 942 aa16.48■□□□□ 0.23
PSMD3-205ENST00000580980 TFCP2L1Q9NZI6 479 aa16.48■□□□□ 0.23
PSMD3-205ENST00000580980 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
PSMD3-205ENST00000580980 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
PSMD3-205ENST00000580980 DIAPH1O60610 1272 aaKnown RBP16.47■□□□□ 0.23
PSMD3-205ENST00000580980 PTGER2P43116 358 aa16.47■□□□□ 0.23
PSMD3-205ENST00000580980 ZNF530Q6P9A1 599 aaPredicted RBP16.47■□□□□ 0.23
PSMD3-205ENST00000580980 ATF5Q9Y2D1 282 aaPredicted RBP16.47■□□□□ 0.23
PSMD3-205ENST00000580980 PNPLA7Q6ZV29 1317 aa16.45■□□□□ 0.22
PSMD3-205ENST00000580980 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
PSMD3-205ENST00000580980 ITGB4P16144 1822 aa16.45■□□□□ 0.22
PSMD3-205ENST00000580980 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
PSMD3-205ENST00000580980 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
PSMD3-205ENST00000580980 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
PSMD3-205ENST00000580980 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
PSMD3-205ENST00000580980 SIK1P57059 783 aa16.42■□□□□ 0.22
PSMD3-205ENST00000580980 FLAD1Q8NFF5 587 aa16.42■□□□□ 0.22
PSMD3-205ENST00000580980 ATG3Q9NT62 314 aa16.42■□□□□ 0.22
PSMD3-205ENST00000580980 ASAP1Q9ULH1 1129 aa16.42■□□□□ 0.22
PSMD3-205ENST00000580980 CABP4P57796 275 aa16.41■□□□□ 0.22
PSMD3-205ENST00000580980 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
PSMD3-205ENST00000580980 AKAP4Q5JQC9 854 aa16.41■□□□□ 0.22
PSMD3-205ENST00000580980 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
PSMD3-205ENST00000580980 C5P01031 1676 aa16.4■□□□□ 0.22
PSMD3-205ENST00000580980 HMOX1P09601 288 aa16.4■□□□□ 0.22
PSMD3-205ENST00000580980 COL23A1Q86Y22 540 aaPredicted RBP16.4■□□□□ 0.22
PSMD3-205ENST00000580980 CFAP53Q96M91 514 aa16.4■□□□□ 0.22
PSMD3-205ENST00000580980 ARXQ96QS3 562 aa16.4■□□□□ 0.22
PSMD3-205ENST00000580980 COL3A1P02461 1466 aaPredicted RBP16.4■□□□□ 0.22
PSMD3-205ENST00000580980 POLD1P28340 1107 aa16.39■□□□□ 0.21
PSMD3-205ENST00000580980 ATP6V1AP38606 617 aa16.39■□□□□ 0.21
PSMD3-205ENST00000580980 AK7Q96M32 723 aa16.39■□□□□ 0.21
PSMD3-205ENST00000580980 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms