RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 BCL11BQ9C0K0 894 aaPredicted RBP18.02■□□□□ 0.48
NUP85-215ENST00000580879 SBF2Q86WG5 1849 aa18.02■□□□□ 0.47
NUP85-215ENST00000580879 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.47
NUP85-215ENST00000580879 MTHFSP49914 203 aa18.01■□□□□ 0.47
NUP85-215ENST00000580879 NCAPD2Q15021 1401 aa18■□□□□ 0.47
NUP85-215ENST00000580879 ZEB1P37275 1124 aaPredicted RBP18■□□□□ 0.47
NUP85-215ENST00000580879 SHANK3Q9BYB0 1731 aa17.99■□□□□ 0.47
NUP85-215ENST00000580879 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
NUP85-215ENST00000580879 IL13P35225 146 aa17.97■□□□□ 0.47
NUP85-215ENST00000580879 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
NUP85-215ENST00000580879 CYP27B1O15528 508 aa17.96■□□□□ 0.47
NUP85-215ENST00000580879 SYTL4Q96C24 671 aaPredicted RBP17.96■□□□□ 0.47
NUP85-215ENST00000580879 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
NUP85-215ENST00000580879 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
NUP85-215ENST00000580879 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
NUP85-215ENST00000580879 KAT6BQ8WYB5 2073 aa17.95■□□□□ 0.46
NUP85-215ENST00000580879 PARD3Q8TEW0 1356 aa17.95■□□□□ 0.46
NUP85-215ENST00000580879 PSDA5PKW4 1024 aaPredicted RBP17.95■□□□□ 0.46
NUP85-215ENST00000580879 PLSCR1O15162 318 aa17.94■□□□□ 0.46
NUP85-215ENST00000580879 PRIM1P49642 420 aaKnown RBP17.94■□□□□ 0.46
NUP85-215ENST00000580879 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
NUP85-215ENST00000580879 SPG7Q9UQ90 795 aa17.94■□□□□ 0.46
NUP85-215ENST00000580879 SULT6B1Q6IMI4 303 aa17.93■□□□□ 0.46
NUP85-215ENST00000580879 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
NUP85-215ENST00000580879 PROM2Q8N271 834 aa17.92■□□□□ 0.46
NUP85-215ENST00000580879 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
NUP85-215ENST00000580879 DOT1LQ8TEK3 1739 aa17.92■□□□□ 0.46
NUP85-215ENST00000580879 RREB1Q92766 1687 aa17.91■□□□□ 0.46
NUP85-215ENST00000580879 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
NUP85-215ENST00000580879 R3HDM1Q15032 1099 aaKnown RBP17.91■□□□□ 0.46
NUP85-215ENST00000580879 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
NUP85-215ENST00000580879 NUP188Q5SRE5 1749 aa17.9■□□□□ 0.46
NUP85-215ENST00000580879 HMOX1P09601 288 aa17.9■□□□□ 0.46
NUP85-215ENST00000580879 TXNRD1Q16881 649 aa17.9■□□□□ 0.46
NUP85-215ENST00000580879 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.9■□□□□ 0.46
NUP85-215ENST00000580879 BTAF1O14981 1849 aa17.9■□□□□ 0.46
NUP85-215ENST00000580879 SRCAPQ6ZRS2 3230 aa17.89■□□□□ 0.45
NUP85-215ENST00000580879 U2SURPO15042 1029 aaKnown RBP17.88■□□□□ 0.45
NUP85-215ENST00000580879 PHKG2P15735 406 aa17.88■□□□□ 0.45
NUP85-215ENST00000580879 PLEKHO1Q53GL0 409 aaPredicted RBP17.88■□□□□ 0.45
NUP85-215ENST00000580879 RGPD3A6NKT7 1758 aaPredicted RBP17.88■□□□□ 0.45
NUP85-215ENST00000580879 RGPD4Q7Z3J3 1758 aa17.88■□□□□ 0.45
NUP85-215ENST00000580879 KDRP35968 1356 aa17.88■□□□□ 0.45
NUP85-215ENST00000580879 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
NUP85-215ENST00000580879 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
NUP85-215ENST00000580879 IFNL2Q8IZJ0 200 aa17.87■□□□□ 0.45
NUP85-215ENST00000580879 ANO8Q9HCE9 1232 aaPredicted RBP17.87■□□□□ 0.45
NUP85-215ENST00000580879 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
NUP85-215ENST00000580879 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
NUP85-215ENST00000580879 CFAP53Q96M91 514 aa17.86■□□□□ 0.45
NUP85-215ENST00000580879 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
NUP85-215ENST00000580879 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
NUP85-215ENST00000580879 KCNQ4P56696 695 aa17.84■□□□□ 0.45
NUP85-215ENST00000580879 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
NUP85-215ENST00000580879 LRRC4BQ9NT99 713 aa17.83■□□□□ 0.44
NUP85-215ENST00000580879 PIGBQ92521 554 aa17.82■□□□□ 0.44
NUP85-215ENST00000580879 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
NUP85-215ENST00000580879 STK32BQ9NY57 414 aa17.8■□□□□ 0.44
NUP85-215ENST00000580879 TMOD3Q9NYL9 352 aa17.8■□□□□ 0.44
NUP85-215ENST00000580879 KDM6AO15550 1401 aaPredicted RBP17.8■□□□□ 0.44
NUP85-215ENST00000580879 HSP90AB1P08238 724 aaKnown RBP17.79■□□□□ 0.44
NUP85-215ENST00000580879 DCAF5Q96JK2 942 aa17.79■□□□□ 0.44
NUP85-215ENST00000580879 CCNL1Q9UK58 526 aaPredicted RBP17.79■□□□□ 0.44
NUP85-215ENST00000580879 NUDCQ9Y266 331 aa17.79■□□□□ 0.44
NUP85-215ENST00000580879 ITGB4P16144 1822 aa17.79■□□□□ 0.44
NUP85-215ENST00000580879 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
NUP85-215ENST00000580879 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
NUP85-215ENST00000580879 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
NUP85-215ENST00000580879 MTHFSDQ2M296 383 aaKnown RBP17.78■□□□□ 0.44
NUP85-215ENST00000580879 SLC27A3Q5K4L6 730 aa17.78■□□□□ 0.44
NUP85-215ENST00000580879 RALBP1Q15311 655 aa17.77■□□□□ 0.44
NUP85-215ENST00000580879 SLC15A2Q16348 729 aa17.77■□□□□ 0.44
NUP85-215ENST00000580879 ZNF827Q17R98 1081 aa17.77■□□□□ 0.44
NUP85-215ENST00000580879 PDGFDQ9GZP0 370 aaPredicted RBP17.77■□□□□ 0.44
NUP85-215ENST00000580879 ASAP1Q9ULH1 1129 aa17.77■□□□□ 0.44
NUP85-215ENST00000580879 PRKAR2BP31323 418 aa17.76■□□□□ 0.43
NUP85-215ENST00000580879 AKAP4Q5JQC9 854 aa17.76■□□□□ 0.43
NUP85-215ENST00000580879 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
NUP85-215ENST00000580879 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
NUP85-215ENST00000580879 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
NUP85-215ENST00000580879 ERVV-2B6SEH9 535 aa17.75■□□□□ 0.43
NUP85-215ENST00000580879 CABP4P57796 275 aa17.75■□□□□ 0.43
NUP85-215ENST00000580879 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
NUP85-215ENST00000580879 LY75O60449 1722 aa17.75■□□□□ 0.43
NUP85-215ENST00000580879 PHACTR3Q96KR7 559 aa17.74■□□□□ 0.43
NUP85-215ENST00000580879 LGR6Q9HBX8 967 aa17.74■□□□□ 0.43
NUP85-215ENST00000580879 ATG3Q9NT62 314 aa17.74■□□□□ 0.43
NUP85-215ENST00000580879 AKT1S1Q96B36 256 aa17.73■□□□□ 0.43
NUP85-215ENST00000580879 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
NUP85-215ENST00000580879 MYBBP1AQ9BQG0 1328 aaKnown RBP17.72■□□□□ 0.43
NUP85-215ENST00000580879 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.43
NUP85-215ENST00000580879 GAS2L2Q8NHY3 880 aa17.71■□□□□ 0.43
NUP85-215ENST00000580879 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
NUP85-215ENST00000580879 FCHSD2O94868 740 aa17.7■□□□□ 0.42
NUP85-215ENST00000580879 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
NUP85-215ENST00000580879 SIK1P57059 783 aa17.7■□□□□ 0.42
NUP85-215ENST00000580879 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
NUP85-215ENST00000580879 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
NUP85-215ENST00000580879 RBM42Q9BTD8 480 aaKnown RBP17.69■□□□□ 0.42
NUP85-215ENST00000580879 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms