RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
CDC42EP4-204ENST00000579611 NHSQ6T4R5 1651 aa23.29■■□□□ 1.32
CDC42EP4-204ENST00000579611 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
CDC42EP4-204ENST00000579611 USHBP1Q8N6Y0 703 aa23.29■■□□□ 1.32
CDC42EP4-204ENST00000579611 PPM1GO15355 546 aaPredicted RBP23.28■■□□□ 1.32
CDC42EP4-204ENST00000579611 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
CDC42EP4-204ENST00000579611 KNSTRNQ9Y448 316 aa23.27■■□□□ 1.32
CDC42EP4-204ENST00000579611 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
CDC42EP4-204ENST00000579611 RGPD2P0DJD1 1756 aa23.24■■□□□ 1.31
CDC42EP4-204ENST00000579611 AMER1Q5JTC6 1135 aaPredicted RBP23.24■■□□□ 1.31
CDC42EP4-204ENST00000579611 EYA1Q99502 592 aa23.24■■□□□ 1.31
CDC42EP4-204ENST00000579611 TNNT2P45379 298 aaPredicted RBP23.23■■□□□ 1.31
CDC42EP4-204ENST00000579611 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-204ENST00000579611 PCDH11XQ9BZA7 1347 aa23.23■■□□□ 1.31
CDC42EP4-204ENST00000579611 PCDH11YQ9BZA8 1340 aa23.23■■□□□ 1.31
CDC42EP4-204ENST00000579611 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
CDC42EP4-204ENST00000579611 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
CDC42EP4-204ENST00000579611 MORC1Q86VD1 984 aa23.22■■□□□ 1.31
CDC42EP4-204ENST00000579611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.22■■□□□ 1.31
CDC42EP4-204ENST00000579611 PLEKHG2Q9H7P9 1386 aa23.22■■□□□ 1.31
CDC42EP4-204ENST00000579611 SLC15A2Q16348 729 aa23.2■■□□□ 1.3
CDC42EP4-204ENST00000579611 SLC27A3Q5K4L6 730 aa23.2■■□□□ 1.3
CDC42EP4-204ENST00000579611 STK32BQ9NY57 414 aa23.2■■□□□ 1.3
CDC42EP4-204ENST00000579611 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
CDC42EP4-204ENST00000579611 CYP27B1O15528 508 aa23.19■■□□□ 1.3
CDC42EP4-204ENST00000579611 MAP2P11137 1827 aaKnown RBP23.19■■□□□ 1.3
CDC42EP4-204ENST00000579611 NKX1-1Q15270 411 aaPredicted RBP23.18■■□□□ 1.3
CDC42EP4-204ENST00000579611 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
CDC42EP4-204ENST00000579611 SPON1Q9HCB6 807 aa23.17■■□□□ 1.3
CDC42EP4-204ENST00000579611 LRRC4BQ9NT99 713 aa23.17■■□□□ 1.3
CDC42EP4-204ENST00000579611 SPG7Q9UQ90 795 aa23.17■■□□□ 1.3
CDC42EP4-204ENST00000579611 BTAF1O14981 1849 aa23.17■■□□□ 1.3
CDC42EP4-204ENST00000579611 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
CDC42EP4-204ENST00000579611 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.29
CDC42EP4-204ENST00000579611 PAPPAQ13219 1627 aa23.12■■□□□ 1.29
CDC42EP4-204ENST00000579611 KAT6BQ8WYB5 2073 aa23.12■■□□□ 1.29
CDC42EP4-204ENST00000579611 PKD1L3Q7Z443 1732 aa23.11■■□□□ 1.29
CDC42EP4-204ENST00000579611 AKT1S1Q96B36 256 aa23.11■■□□□ 1.29
CDC42EP4-204ENST00000579611 PDGFDQ9GZP0 370 aaPredicted RBP23.11■■□□□ 1.29
CDC42EP4-204ENST00000579611 DOT1LQ8TEK3 1739 aa23.1■■□□□ 1.29
CDC42EP4-204ENST00000579611 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
CDC42EP4-204ENST00000579611 ZNF827Q17R98 1081 aa23.09■■□□□ 1.29
CDC42EP4-204ENST00000579611 IFNL2Q8IZJ0 200 aa23.09■■□□□ 1.29
CDC42EP4-204ENST00000579611 PHKG2P15735 406 aa23.08■■□□□ 1.29
CDC42EP4-204ENST00000579611 HMGB2P26583 209 aaKnown RBP23.08■■□□□ 1.29
CDC42EP4-204ENST00000579611 IL13P35225 146 aa23.08■■□□□ 1.29
CDC42EP4-204ENST00000579611 KDRP35968 1356 aa23.06■■□□□ 1.28
CDC42EP4-204ENST00000579611 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
CDC42EP4-204ENST00000579611 MTFR1LQ9H019 292 aa23.06■■□□□ 1.28
CDC42EP4-204ENST00000579611 CCNL1Q9UK58 526 aaPredicted RBP23.06■■□□□ 1.28
CDC42EP4-204ENST00000579611 PTGER2P43116 358 aa23.05■■□□□ 1.28
CDC42EP4-204ENST00000579611 MTHFSP49914 203 aa23.05■■□□□ 1.28
CDC42EP4-204ENST00000579611 AMOTQ4VCS5 1084 aa23.05■■□□□ 1.28
CDC42EP4-204ENST00000579611 PIGBQ92521 554 aa23.05■■□□□ 1.28
CDC42EP4-204ENST00000579611 SMARCC1Q92922 1105 aaPredicted RBP23.05■■□□□ 1.28
CDC42EP4-204ENST00000579611 ZBTB7AO95365 584 aa23.04■■□□□ 1.28
CDC42EP4-204ENST00000579611 PLEKHO1Q53GL0 409 aaPredicted RBP23.04■■□□□ 1.28
CDC42EP4-204ENST00000579611 LY75O60449 1722 aa23.03■■□□□ 1.28
CDC42EP4-204ENST00000579611 CC2D1BQ5T0F9 858 aaKnown RBP23.03■■□□□ 1.28
CDC42EP4-204ENST00000579611 PALLDQ8WX93 1383 aa23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 KCNQ4P56696 695 aa23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 AEBP1Q8IUX7 1158 aa23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 SLC16A10Q8TF71 515 aa23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 SGIP1Q9BQI5 828 aa23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
CDC42EP4-204ENST00000579611 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
CDC42EP4-204ENST00000579611 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
CDC42EP4-204ENST00000579611 DCAF5Q96JK2 942 aa23■■□□□ 1.27
CDC42EP4-204ENST00000579611 ATF5Q9Y2D1 282 aaPredicted RBP23■■□□□ 1.27
CDC42EP4-204ENST00000579611 PNPLA7Q6ZV29 1317 aa23■■□□□ 1.27
CDC42EP4-204ENST00000579611 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
CDC42EP4-204ENST00000579611 TMOD3Q9NYL9 352 aa22.99■■□□□ 1.27
CDC42EP4-204ENST00000579611 TFCP2L1Q9NZI6 479 aa22.99■■□□□ 1.27
CDC42EP4-204ENST00000579611 ZNF530Q6P9A1 599 aaPredicted RBP22.96■■□□□ 1.27
CDC42EP4-204ENST00000579611 DIAPH1O60610 1272 aaKnown RBP22.95■■□□□ 1.26
CDC42EP4-204ENST00000579611 ATG3Q9NT62 314 aa22.94■■□□□ 1.26
CDC42EP4-204ENST00000579611 ASAP1Q9ULH1 1129 aa22.94■■□□□ 1.26
CDC42EP4-204ENST00000579611 QSER1Q2KHR3 1735 aa22.94■■□□□ 1.26
CDC42EP4-204ENST00000579611 LOC102724428A0A0B4J2F2 783 aa22.93■■□□□ 1.26
CDC42EP4-204ENST00000579611 SIK1P57059 783 aa22.93■■□□□ 1.26
CDC42EP4-204ENST00000579611 KDM6AO15550 1401 aaPredicted RBP22.92■■□□□ 1.26
CDC42EP4-204ENST00000579611 ITGB4P16144 1822 aa22.92■■□□□ 1.26
CDC42EP4-204ENST00000579611 C1orf141Q5JVX7 400 aa22.92■■□□□ 1.26
CDC42EP4-204ENST00000579611 FLAD1Q8NFF5 587 aa22.92■■□□□ 1.26
CDC42EP4-204ENST00000579611 COL23A1Q86Y22 540 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP4-204ENST00000579611 ARXQ96QS3 562 aa22.9■■□□□ 1.26
CDC42EP4-204ENST00000579611 COL3A1P02461 1466 aaPredicted RBP22.9■■□□□ 1.26
CDC42EP4-204ENST00000579611 MAP3K5Q99683 1374 aa22.89■■□□□ 1.26
CDC42EP4-204ENST00000579611 AKAP4Q5JQC9 854 aa22.89■■□□□ 1.25
CDC42EP4-204ENST00000579611 CABP4P57796 275 aa22.88■■□□□ 1.25
CDC42EP4-204ENST00000579611 SYT17Q9BSW7 474 aa22.88■■□□□ 1.25
CDC42EP4-204ENST00000579611 HMOX1P09601 288 aa22.87■■□□□ 1.25
CDC42EP4-204ENST00000579611 POLD1P28340 1107 aa22.87■■□□□ 1.25
CDC42EP4-204ENST00000579611 FHDC1Q9C0D6 1143 aaPredicted RBP22.87■■□□□ 1.25
CDC42EP4-204ENST00000579611 ITPK1Q13572 414 aa22.86■■□□□ 1.25
CDC42EP4-204ENST00000579611 LINC00116Q8NCU8 138 aa22.86■■□□□ 1.25
CDC42EP4-204ENST00000579611 AK7Q96M32 723 aa22.86■■□□□ 1.25
CDC42EP4-204ENST00000579611 C5P01031 1676 aa22.86■■□□□ 1.25
CDC42EP4-204ENST00000579611 ATP6V1AP38606 617 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms