RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-213	ENST00000579609	HDAC1	Q13547	482 aa	Predicted RBP	11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	DDRGK1	Q96HY6	314 aa		11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	IPO9	Q96P70	1041 aa	Known RBP	11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	COG6	Q9Y2V7	657 aa		11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	SLIT3	O75094	1523 aa		11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	ABCC6	O95255	1503 aa		11.29	□□□□□ -0.6
PPP4R1-213	ENST00000579609	PPM1G	O15355	546 aa	Predicted RBP	11.28	□□□□□ -0.6
PPP4R1-213	ENST00000579609	SSH1	Q8WYL5	1049 aa		11.28	□□□□□ -0.6
PPP4R1-213	ENST00000579609	FRAT1	Q92837	279 aa	Predicted RBP	11.28	□□□□□ -0.6
PPP4R1-213	ENST00000579609	NFAT5	O94916	1531 aa		11.28	□□□□□ -0.6
PPP4R1-213	ENST00000579609	NCKAP5L	Q9HCH0	1330 aa		11.28	□□□□□ -0.6
PPP4R1-213	ENST00000579609	CAMTA1	Q9Y6Y1	1673 aa		11.27	□□□□□ -0.6
PPP4R1-213	ENST00000579609	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	TRIM27	P14373	513 aa		11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	RRS1	Q15050	365 aa	Known RBP	11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	GAS2L2	Q8NHY3	880 aa		11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PANK1	Q8TE04	598 aa		11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	TSR2	Q969E8	191 aa	Known RBP	11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PHACTR3	Q96KR7	559 aa		11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	MAP3K19	Q56UN5	1328 aa		11.27	□□□□□ -0.61
PPP4R1-213	ENST00000579609	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	VAMP4	O75379	141 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	KCNH5	Q8NCM2	988 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	CHMP4A	Q9BY43	222 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	API5	Q9BZZ5	524 aa	Known RBP	11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	ZRANB1	Q9UGI0	708 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PHF8	Q9UPP1	1060 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	NCAPD2	Q15021	1401 aa		11.26	□□□□□ -0.61
PPP4R1-213	ENST00000579609	CHL1	O00533	1208 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	HMOX1	P09601	288 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	RLBP1	P12271	317 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	ERICH6	Q7L0X2	663 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	CREBZF	Q9NS37	354 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	NOP58	Q9Y2X3	529 aa	Known RBP	11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	ABCC4	O15439	1325 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	OVOS2	A0A0G2JMS6	1433 aa		11.25	□□□□□ -0.61
PPP4R1-213	ENST00000579609	EIF5B	O60841	1220 aa	Known RBP	11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PRR29	P0C7W0	189 aa		11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	SULT6B1	Q6IMI4	303 aa		11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	MRPL50	Q8N5N7	158 aa	Known RBP	11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	MBIP	Q9NS73	344 aa		11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	ZBTB40	Q9NUA8	1239 aa		11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	CRB1	P82279	1406 aa		11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	FAM208A	Q9UK61	1670 aa	Known RBP	11.24	□□□□□ -0.61
PPP4R1-213	ENST00000579609	IGHD	P01880	384 aa		11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	NLRP6	P59044	892 aa		11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	TWISTNB	Q3B726	338 aa	Predicted RBP	11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	SMC5	Q8IY18	1101 aa		11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	NOB1	Q9ULX3	412 aa	Known RBP	11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PTPRC	P08575	1304 aa		11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	MED1	Q15648	1581 aa	Predicted RBP	11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	LMO7	Q8WWI1	1683 aa		11.23	□□□□□ -0.61
PPP4R1-213	ENST00000579609	AMPH	P49418	695 aa		11.22	□□□□□ -0.61
PPP4R1-213	ENST00000579609	NUBP1	P53384	320 aa		11.22	□□□□□ -0.61
PPP4R1-213	ENST00000579609	C8orf34	Q49A92	452 aa		11.22	□□□□□ -0.61
PPP4R1-213	ENST00000579609	ALS2	Q96Q42	1657 aa		11.22	□□□□□ -0.61
PPP4R1-213	ENST00000579609	HOXC9	P31274	260 aa		11.21	□□□□□ -0.61
PPP4R1-213	ENST00000579609	HSP90AB2P	Q58FF8	381 aa		11.21	□□□□□ -0.61
PPP4R1-213	ENST00000579609	RTF1	Q92541	710 aa	Known RBP	11.21	□□□□□ -0.61
PPP4R1-213	ENST00000579609	GCC1	Q96CN9	775 aa		11.21	□□□□□ -0.61
PPP4R1-213	ENST00000579609	PCDHB15	Q9Y5E8	787 aa		11.21	□□□□□ -0.61
PPP4R1-213	ENST00000579609	USP19	O94966	1318 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	FBLN1	P23142	703 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	ITPRIP	Q8IWB1	547 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	ABTB2	Q8N961	1025 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	IP6K1	Q92551	441 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	BCL2L13	Q9BXK5	485 aa		11.2	□□□□□ -0.62
PPP4R1-213	ENST00000579609	PXDNL	A1KZ92	1463 aa		11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	PITPNM1	O00562	1244 aa		11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	MNX1	P50219	401 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	INTS3	Q68E01	1043 aa	Known RBP	11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	TMEM57	Q8N5G2	664 aa		11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	BBX	Q8WY36	941 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	ADAMTS7	Q9UKP4	1686 aa		11.19	□□□□□ -0.62
PPP4R1-213	ENST00000579609	KDM3B	Q7LBC6	1761 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	MAP3K5	Q99683	1374 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	HOXB7	P09629	217 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	AEBP1	Q8IUX7	1158 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	EYA1	Q99502	592 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	C19orf44	Q9H6X5	657 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	C1orf167	Q5SNV9	1468 aa		11.18	□□□□□ -0.62
PPP4R1-213	ENST00000579609	ZBTB7B	O15156	539 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP4R1-213	ENST00000579609	PDZRN3	Q9UPQ7	1066 aa		11.17	□□□□□ -0.62
PPP4R1-213	ENST00000579609	CEMIP	Q8WUJ3	1361 aa		11.16	□□□□□ -0.62
PPP4R1-213	ENST00000579609	NUTM2F	A1L443	756 aa		11.16	□□□□□ -0.62
PPP4R1-213	ENST00000579609	GNAT3	A8MTJ3	354 aa		11.16	□□□□□ -0.62
PPP4R1-213	ENST00000579609	PSME1	Q06323	249 aa		11.16	□□□□□ -0.62
PPP4R1-213	ENST00000579609	LAS1L	Q9Y4W2	734 aa	Known RBP	11.16	□□□□□ -0.62
PPP4R1-213	ENST00000579609	RGS3	P49796	1198 aa		11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	GSE1	Q14687	1217 aa		11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	MTHFSD	Q2M296	383 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	AMOT	Q4VCS5	1084 aa		11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	C8orf58	Q8NAV2	365 aa		11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	UPF2	Q9HAU5	1272 aa	Known RBP	11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	RGS12	O14924	1447 aa		11.15	□□□□□ -0.62
PPP4R1-213	ENST00000579609	MSH6	P52701	1360 aa		11.15	□□□□□ -0.63
PPP4R1-213	ENST00000579609	NUCB1	Q02818	461 aa		11.14	□□□□□ -0.63
PPP4R1-213	ENST00000579609	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP4R1-213	ENST00000579609	TSPYL6	Q8N831	410 aa		11.14	□□□□□ -0.63
PPP4R1-213	ENST00000579609	RNF25	Q96BH1	459 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms