RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 EIF4A2Q14240 407 aaKnown RBP23.72■■□□□ 1.39
ITGB4-205ENST00000579211 EYA1Q99502 592 aa23.72■■□□□ 1.39
ITGB4-205ENST00000579211 BCL9O00512 1426 aa23.72■■□□□ 1.39
ITGB4-205ENST00000579211 CAMKK2Q96RR4 588 aa23.71■■□□□ 1.39
ITGB4-205ENST00000579211 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
ITGB4-205ENST00000579211 BTAF1O14981 1849 aa23.7■■□□□ 1.38
ITGB4-205ENST00000579211 RGPD3A6NKT7 1758 aaPredicted RBP23.7■■□□□ 1.38
ITGB4-205ENST00000579211 RGPD4Q7Z3J3 1758 aa23.7■■□□□ 1.38
ITGB4-205ENST00000579211 DOT1LQ8TEK3 1739 aa23.7■■□□□ 1.38
ITGB4-205ENST00000579211 RREB1Q92766 1687 aa23.7■■□□□ 1.38
ITGB4-205ENST00000579211 SYTL4Q96C24 671 aaPredicted RBP23.68■■□□□ 1.38
ITGB4-205ENST00000579211 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 KCNQ2O43526 872 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 MTHFSP49914 203 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 SPG7Q9UQ90 795 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 NUP188Q5SRE5 1749 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
ITGB4-205ENST00000579211 PCDH11XQ9BZA7 1347 aa23.66■■□□□ 1.38
ITGB4-205ENST00000579211 PCDH11YQ9BZA8 1340 aa23.66■■□□□ 1.38
ITGB4-205ENST00000579211 PLSCR1O15162 318 aa23.66■■□□□ 1.38
ITGB4-205ENST00000579211 NBPF14Q5TI25 921 aa23.65■■□□□ 1.38
ITGB4-205ENST00000579211 ITGB4P16144 1822 aa23.63■■□□□ 1.37
ITGB4-205ENST00000579211 PSDA5PKW4 1024 aaPredicted RBP23.62■■□□□ 1.37
ITGB4-205ENST00000579211 IGSF1Q8N6C5 1336 aa23.61■■□□□ 1.37
ITGB4-205ENST00000579211 NCAPD2Q15021 1401 aa23.61■■□□□ 1.37
ITGB4-205ENST00000579211 PRIM1P49642 420 aaKnown RBP23.6■■□□□ 1.37
ITGB4-205ENST00000579211 DIAPH1O60610 1272 aaKnown RBP23.59■■□□□ 1.37
ITGB4-205ENST00000579211 IL13P35225 146 aa23.58■■□□□ 1.37
ITGB4-205ENST00000579211 R3HDM1Q15032 1099 aaKnown RBP23.58■■□□□ 1.37
ITGB4-205ENST00000579211 PLEKHO1Q53GL0 409 aaPredicted RBP23.58■■□□□ 1.37
ITGB4-205ENST00000579211 SULT6B1Q6IMI4 303 aa23.58■■□□□ 1.37
ITGB4-205ENST00000579211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.58■■□□□ 1.37
ITGB4-205ENST00000579211 CYP27B1O15528 508 aa23.57■■□□□ 1.36
ITGB4-205ENST00000579211 TXNRD1Q16881 649 aa23.57■■□□□ 1.36
ITGB4-205ENST00000579211 CFAP53Q96M91 514 aa23.57■■□□□ 1.36
ITGB4-205ENST00000579211 IFNL2Q8IZJ0 200 aa23.56■■□□□ 1.36
ITGB4-205ENST00000579211 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
ITGB4-205ENST00000579211 AEBP1Q8IUX7 1158 aa23.54■■□□□ 1.36
ITGB4-205ENST00000579211 VIRMAQ69YN4 1812 aaKnown RBP23.54■■□□□ 1.36
ITGB4-205ENST00000579211 AMOTQ4VCS5 1084 aa23.53■■□□□ 1.36
ITGB4-205ENST00000579211 MPRIPQ6WCQ1 1025 aa23.53■■□□□ 1.36
ITGB4-205ENST00000579211 TOGARAM1Q9Y4F4 1720 aa23.53■■□□□ 1.36
ITGB4-205ENST00000579211 U2SURPO15042 1029 aaKnown RBP23.52■■□□□ 1.36
ITGB4-205ENST00000579211 HMOX1P09601 288 aa23.52■■□□□ 1.36
ITGB4-205ENST00000579211 PROM2Q8N271 834 aa23.52■■□□□ 1.36
ITGB4-205ENST00000579211 LY75O60449 1722 aa23.52■■□□□ 1.36
ITGB4-205ENST00000579211 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
ITGB4-205ENST00000579211 PHKG2P15735 406 aa23.51■■□□□ 1.35
ITGB4-205ENST00000579211 ZNF530Q6P9A1 599 aaPredicted RBP23.51■■□□□ 1.35
ITGB4-205ENST00000579211 PPP2R1AP30153 589 aa23.5■■□□□ 1.35
ITGB4-205ENST00000579211 C1orf141Q5JVX7 400 aa23.5■■□□□ 1.35
ITGB4-205ENST00000579211 STK32BQ9NY57 414 aa23.5■■□□□ 1.35
ITGB4-205ENST00000579211 HSP90AB1P08238 724 aaKnown RBP23.49■■□□□ 1.35
ITGB4-205ENST00000579211 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
ITGB4-205ENST00000579211 NUDCQ9Y266 331 aa23.48■■□□□ 1.35
ITGB4-205ENST00000579211 TMOD3Q9NYL9 352 aa23.47■■□□□ 1.35
ITGB4-205ENST00000579211 KDRP35968 1356 aa23.47■■□□□ 1.35
ITGB4-205ENST00000579211 SLC27A3Q5K4L6 730 aa23.46■■□□□ 1.35
ITGB4-205ENST00000579211 COL3A1P02461 1466 aaPredicted RBP23.44■■□□□ 1.34
ITGB4-205ENST00000579211 DCAF5Q96JK2 942 aa23.44■■□□□ 1.34
ITGB4-205ENST00000579211 SCN11AQ9UI33 1791 aa23.44■■□□□ 1.34
ITGB4-205ENST00000579211 SLC15A2Q16348 729 aa23.43■■□□□ 1.34
ITGB4-205ENST00000579211 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
ITGB4-205ENST00000579211 CCNL1Q9UK58 526 aaPredicted RBP23.43■■□□□ 1.34
ITGB4-205ENST00000579211 ANO8Q9HCE9 1232 aaPredicted RBP23.42■■□□□ 1.34
ITGB4-205ENST00000579211 TAF1LQ8IZX4 1826 aa23.42■■□□□ 1.34
ITGB4-205ENST00000579211 HMGB2P26583 209 aaKnown RBP23.41■■□□□ 1.34
ITGB4-205ENST00000579211 PIGBQ92521 554 aa23.41■■□□□ 1.34
ITGB4-205ENST00000579211 ERVV-2B6SEH9 535 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 KCNQ4P56696 695 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 CABP4P57796 275 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 RALBP1Q15311 655 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 C5P01031 1676 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 PALLDQ8WX93 1383 aa23.4■■□□□ 1.34
ITGB4-205ENST00000579211 U2AF1L5P0DN76 240 aaPredicted RBP23.39■■□□□ 1.33
ITGB4-205ENST00000579211 U2AF1Q01081 240 aaKnown RBP eCLIP23.39■■□□□ 1.33
ITGB4-205ENST00000579211 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
ITGB4-205ENST00000579211 LRP5O75197 1615 aa23.38■■□□□ 1.33
ITGB4-205ENST00000579211 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
ITGB4-205ENST00000579211 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
ITGB4-205ENST00000579211 CASZ1Q86V15 1759 aa23.36■■□□□ 1.33
ITGB4-205ENST00000579211 TUBGCP6Q96RT7 1819 aa23.36■■□□□ 1.33
ITGB4-205ENST00000579211 MTHFSDQ2M296 383 aaKnown RBP23.35■■□□□ 1.33
ITGB4-205ENST00000579211 TFCP2L1Q9NZI6 479 aa23.35■■□□□ 1.33
ITGB4-205ENST00000579211 ASAP1Q9ULH1 1129 aa23.34■■□□□ 1.33
ITGB4-205ENST00000579211 KDM6AO15550 1401 aaPredicted RBP23.33■■□□□ 1.33
ITGB4-205ENST00000579211 NEFMP07197 916 aa23.33■■□□□ 1.33
ITGB4-205ENST00000579211 PRKAR2BP31323 418 aa23.33■■□□□ 1.33
ITGB4-205ENST00000579211 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
ITGB4-205ENST00000579211 SPON1Q9HCB6 807 aa23.33■■□□□ 1.33
ITGB4-205ENST00000579211 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
ITGB4-205ENST00000579211 ZNF827Q17R98 1081 aa23.32■■□□□ 1.32
ITGB4-205ENST00000579211 NFATC2IPQ8NCF5 419 aa23.32■■□□□ 1.32
ITGB4-205ENST00000579211 RBM42Q9BTD8 480 aaKnown RBP23.31■■□□□ 1.32
ITGB4-205ENST00000579211 ATG3Q9NT62 314 aa23.31■■□□□ 1.32
ITGB4-205ENST00000579211 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 MSH5O43196 834 aa23.3■■□□□ 1.32
ITGB4-205ENST00000579211 FCHSD2O94868 740 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms