RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 NBPF4Q96M43 638 aa12.77□□□□□ -0.37
CDK5RAP3-211ENST00000578996 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 FLT4P35916 1363 aa12.76□□□□□ -0.37
CDK5RAP3-211ENST00000578996 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 TATP17735 454 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
CDK5RAP3-211ENST00000578996 INSRP06213 1382 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
CDK5RAP3-211ENST00000578996 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KCNQ4P56696 695 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 MTFR1LQ9H019 292 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 SHANK3Q9BYB0 1731 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PTGER2P43116 358 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
CDK5RAP3-211ENST00000578996 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PCDH11XQ9BZA7 1347 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 PCDH11YQ9BZA8 1340 aa12.71□□□□□ -0.37
CDK5RAP3-211ENST00000578996 NSD2O96028 1365 aa12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 TFCP2L1Q9NZI6 479 aa12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-211ENST00000578996 YY1P25490 414 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 KLHL34Q8N239 644 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 FHDC1Q9C0D6 1143 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-211ENST00000578996 MSH5O43196 834 aa12.68□□□□□ -0.38
CDK5RAP3-211ENST00000578996 MPRIPQ6WCQ1 1025 aa12.68□□□□□ -0.38
CDK5RAP3-211ENST00000578996 PNPLA7Q6ZV29 1317 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 ARXQ96QS3 562 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 PANK3Q9H999 370 aa12.67□□□□□ -0.38
CDK5RAP3-211ENST00000578996 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 CYP27B1O15528 508 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 POLKQ9UBT6 870 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
CDK5RAP3-211ENST00000578996 LY75O60449 1722 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 POLD1P28340 1107 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 EYA1Q99502 592 aa12.65□□□□□ -0.38
CDK5RAP3-211ENST00000578996 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PALLDQ8WX93 1383 aa12.64□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PKD1L3Q7Z443 1732 aa12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TOGARAM1Q9Y4F4 1720 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TUBGCP6Q96RT7 1819 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
CDK5RAP3-211ENST00000578996 MSL1Q68DK7 614 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 IFNL2Q8IZJ0 200 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 C5P01031 1676 aa12.61□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PHKG2P15735 406 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PIGBQ92521 554 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 AK7Q96M32 723 aa12.6□□□□□ -0.39
CDK5RAP3-211ENST00000578996 PHF14O94880 888 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 GPR162Q16538 588 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.393e-14■□□□□ 10.7
CDK5RAP3-211ENST00000578996 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 UTRNP46939 3433 aa12.59□□□□□ -0.39
CDK5RAP3-211ENST00000578996 ITGB4P16144 1822 aa12.58□□□□□ -0.4
CDK5RAP3-211ENST00000578996 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-211ENST00000578996 MAP3K5Q99683 1374 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
CDK5RAP3-211ENST00000578996 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SIK1P57059 783 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 NLGN2Q8NFZ4 835 aa12.56□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ATP6V1AP38606 617 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 LINC00116Q8NCU8 138 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 TAF1LQ8IZX4 1826 aa12.55□□□□□ -0.4
CDK5RAP3-211ENST00000578996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 C1orf141Q5JVX7 400 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 AMIGO3Q86WK7 504 aa12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-211ENST00000578996 ATG3Q9NT62 314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms