RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 BCS1LQ9Y276 419 aa11.82□□□□□ -0.52
PPP4R1-211ENST00000578875 CPSF1Q10570 1443 aaKnown RBP11.82□□□□□ -0.52
PPP4R1-211ENST00000578875 SLIT3O75094 1523 aa11.81□□□□□ -0.52
PPP4R1-211ENST00000578875 ITSN1Q15811 1721 aa11.81□□□□□ -0.52
PPP4R1-211ENST00000578875 A0A0G2JLW4 131 aa11.81□□□□□ -0.52
PPP4R1-211ENST00000578875 FOXN1O15353 648 aa11.81□□□□□ -0.52
PPP4R1-211ENST00000578875 C9orf131Q5VYM1 1079 aa11.81□□□□□ -0.52
PPP4R1-211ENST00000578875 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
PPP4R1-211ENST00000578875 NSD2O96028 1365 aa11.79□□□□□ -0.52
PPP4R1-211ENST00000578875 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
PPP4R1-211ENST00000578875 ABCC6O95255 1503 aa11.78□□□□□ -0.52
PPP4R1-211ENST00000578875 KCPQ6ZWJ8 1503 aa11.78□□□□□ -0.52
PPP4R1-211ENST00000578875 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
PPP4R1-211ENST00000578875 PHF14O94880 888 aa11.77□□□□□ -0.53
PPP4R1-211ENST00000578875 KCNH5Q8NCM2 988 aa11.77□□□□□ -0.53
PPP4R1-211ENST00000578875 SMC1BQ8NDV3 1235 aa11.77□□□□□ -0.53
PPP4R1-211ENST00000578875 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
PPP4R1-211ENST00000578875 MKRN1Q9UHC7 482 aaKnown RBP11.76□□□□□ -0.53
PPP4R1-211ENST00000578875 DPEP1P16444 411 aa11.75□□□□□ -0.53
PPP4R1-211ENST00000578875 MLLT1Q03111 559 aaPredicted RBP11.75□□□□□ -0.53
PPP4R1-211ENST00000578875 ANKRD24Q8TF21 1146 aa11.75□□□□□ -0.53
PPP4R1-211ENST00000578875 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
PPP4R1-211ENST00000578875 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
PPP4R1-211ENST00000578875 FCHSD2O94868 740 aa11.74□□□□□ -0.53
PPP4R1-211ENST00000578875 FLAD1Q8NFF5 587 aa11.74□□□□□ -0.53
PPP4R1-211ENST00000578875 PRDM10Q9NQV6 1147 aa11.74□□□□□ -0.53
PPP4R1-211ENST00000578875 CICQ96RK0 1608 aaPredicted RBP11.74□□□□□ -0.53
PPP4R1-211ENST00000578875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
PPP4R1-211ENST00000578875 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
PPP4R1-211ENST00000578875 LY75O60449 1722 aa11.73□□□□□ -0.53
PPP4R1-211ENST00000578875 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
PPP4R1-211ENST00000578875 RNF181Q9P0P0 153 aa11.73□□□□□ -0.53
PPP4R1-211ENST00000578875 PIK3C2AO00443 1686 aa11.72□□□□□ -0.53
PPP4R1-211ENST00000578875 KCNA3P22001 575 aa11.72□□□□□ -0.53
PPP4R1-211ENST00000578875 LBX1P52954 281 aa11.72□□□□□ -0.53
PPP4R1-211ENST00000578875 USP47Q96K76 1375 aa11.71□□□□□ -0.53
PPP4R1-211ENST00000578875 CCDC85CA6NKD9 419 aa11.71□□□□□ -0.53
PPP4R1-211ENST00000578875 MMP10P09238 476 aa11.71□□□□□ -0.53
PPP4R1-211ENST00000578875 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
PPP4R1-211ENST00000578875 LTV1Q96GA3 475 aaPredicted RBP11.71□□□□□ -0.53
PPP4R1-211ENST00000578875 RGS19P49795 217 aa11.7□□□□□ -0.54
PPP4R1-211ENST00000578875 TGFB2P61812 414 aa11.7□□□□□ -0.54
PPP4R1-211ENST00000578875 N4BP2Q86UW6 1770 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-211ENST00000578875 AK7Q96M32 723 aa11.69□□□□□ -0.54
PPP4R1-211ENST00000578875 NFAT5O94916 1531 aa11.69□□□□□ -0.54
PPP4R1-211ENST00000578875 POTECB2RU33 542 aa11.68□□□□□ -0.54
PPP4R1-211ENST00000578875 CTCFP49711 727 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-211ENST00000578875 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-211ENST00000578875 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
PPP4R1-211ENST00000578875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.541e-7■■□□□ 14.3
PPP4R1-211ENST00000578875 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
PPP4R1-211ENST00000578875 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
PPP4R1-211ENST00000578875 C10orf71Q711Q0 1435 aa11.66□□□□□ -0.54
PPP4R1-211ENST00000578875 DOT1LQ8TEK3 1739 aa11.66□□□□□ -0.54
PPP4R1-211ENST00000578875 KIAA1551Q9HCM1 1747 aa11.66□□□□□ -0.54
PPP4R1-211ENST00000578875 NME9Q86XW9 330 aa11.65□□□□□ -0.54
PPP4R1-211ENST00000578875 LINC00116Q8NCU8 138 aa11.65□□□□□ -0.54
PPP4R1-211ENST00000578875 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
PPP4R1-211ENST00000578875 PALLDQ8WX93 1383 aa11.65□□□□□ -0.55
PPP4R1-211ENST00000578875 PLEKHG2Q9H7P9 1386 aa11.65□□□□□ -0.55
PPP4R1-211ENST00000578875 TOGARAM1Q9Y4F4 1720 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 FBLN1P23142 703 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 VEGFBP49765 207 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 RASSF7Q02833 373 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 WBP1LQ9NX94 342 aa11.64□□□□□ -0.55
PPP4R1-211ENST00000578875 C5P01031 1676 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 QRICH2Q9H0J4 1663 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 GLTPD2A6NH11 291 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 HSPA8P11142 646 aaKnown RBP11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 PIM2Q9P1W9 311 aa11.63□□□□□ -0.55
PPP4R1-211ENST00000578875 TTC21AQ8NDW8 1320 aa11.62□□□□□ -0.55
PPP4R1-211ENST00000578875 CENPJQ9HC77 1338 aaPredicted RBP11.62□□□□□ -0.55
PPP4R1-211ENST00000578875 GNPATO15228 680 aa11.62□□□□□ -0.55
PPP4R1-211ENST00000578875 SSFA2P28290 1259 aa11.62□□□□□ -0.55
PPP4R1-211ENST00000578875 CHRNA5P30532 468 aa11.62□□□□□ -0.55
PPP4R1-211ENST00000578875 C4BP0C0L5 1744 aa11.61□□□□□ -0.55
PPP4R1-211ENST00000578875 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
PPP4R1-211ENST00000578875 ITPK1Q13572 414 aa11.61□□□□□ -0.55
PPP4R1-211ENST00000578875 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
PPP4R1-211ENST00000578875 IP6K1Q92551 441 aa11.61□□□□□ -0.55
PPP4R1-211ENST00000578875 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
PPP4R1-211ENST00000578875 TMF1P82094 1093 aa11.6□□□□□ -0.55
PPP4R1-211ENST00000578875 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
PPP4R1-211ENST00000578875 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
PPP4R1-211ENST00000578875 KIAA1210Q9ULL0 1709 aa11.6□□□□□ -0.55
PPP4R1-211ENST00000578875 UBR3Q6ZT12 1888 aa11.59□□□□□ -0.55
PPP4R1-211ENST00000578875 PIGBQ92521 554 aa11.59□□□□□ -0.55
PPP4R1-211ENST00000578875 CCDC87Q9NVE4 849 aa11.59□□□□□ -0.55
PPP4R1-211ENST00000578875 PKD1L3Q7Z443 1732 aa11.59□□□□□ -0.55
PPP4R1-211ENST00000578875 KIF13BQ9NQT8 1826 aa11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 KTN1Q86UP2 1357 aaKnown RBP11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 SBF1O95248 1867 aa11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
PPP4R1-211ENST00000578875 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms