RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 DEPDC4Q8N2C3 294 aa9.07□□□□□ -0.96
PTPRM-207ENST00000578571 MAFBQ9Y5Q3 323 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-207ENST00000578571 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 AXIN1O15169 862 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 NCOA4Q13772 614 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 PLEKHM2Q8IWE5 1019 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 CCDC82Q8N4S0 544 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 MEIOBQ8N635 442 aa9.06□□□□□ -0.96
PTPRM-207ENST00000578571 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
PTPRM-207ENST00000578571 OSBPL3Q9H4L5 887 aa9.05□□□□□ -0.96
PTPRM-207ENST00000578571 DACH1Q9UI36 760 aa9.05□□□□□ -0.96
PTPRM-207ENST00000578571 LZTS3O60299 673 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-207ENST00000578571 ADH1AP07327 375 aa9.04□□□□□ -0.96
PTPRM-207ENST00000578571 CCDC97Q96F63 343 aaPredicted RBP9.04□□□□□ -0.96
PTPRM-207ENST00000578571 SERPINA10Q9UK55 444 aa9.04□□□□□ -0.96
PTPRM-207ENST00000578571 BMP1P13497 986 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 LMOD1P29536 600 aaPredicted RBP9.03□□□□□ -0.96
PTPRM-207ENST00000578571 USP4Q13107 963 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 EML3Q32P44 896 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 TRIM46Q7Z4K8 759 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 TRIM52Q96A61 297 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 AGBL1Q96MI9 1066 aa9.03□□□□□ -0.96
PTPRM-207ENST00000578571 MYCP01106 439 aaPredicted RBP9.02□□□□□ -0.97
PTPRM-207ENST00000578571 MRPL14Q6P1L8 145 aaKnown RBP9.01□□□□□ -0.97
PTPRM-207ENST00000578571 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
PTPRM-207ENST00000578571 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
PTPRM-207ENST00000578571 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
PTPRM-207ENST00000578571 CYP2U1Q7Z449 544 aa9□□□□□ -0.97
PTPRM-207ENST00000578571 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
PTPRM-207ENST00000578571 NOD1Q9Y239 953 aa9□□□□□ -0.97
PTPRM-207ENST00000578571 PCDHGA11Q9Y5H2 935 aa9□□□□□ -0.97
PTPRM-207ENST00000578571 ATP5J2-PTCD1G3V325 749 aa8.99□□□□□ -0.97
PTPRM-207ENST00000578571 PTGIRP43119 386 aa8.99□□□□□ -0.97
PTPRM-207ENST00000578571 RELBQ01201 579 aa8.99□□□□□ -0.97
PTPRM-207ENST00000578571 TSEN34Q9BSV6 310 aaKnown RBP8.99□□□□□ -0.97
PTPRM-207ENST00000578571 ESF1Q9H501 851 aaKnown RBP8.99□□□□□ -0.97
PTPRM-207ENST00000578571 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
PTPRM-207ENST00000578571 STAU1O95793 577 aaKnown RBP8.98□□□□□ -0.97
PTPRM-207ENST00000578571 RFX1P22670 979 aa8.98□□□□□ -0.97
PTPRM-207ENST00000578571 GTF2IP78347 998 aa8.98□□□□□ -0.97
PTPRM-207ENST00000578571 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
PTPRM-207ENST00000578571 CLDN10P78369 228 aa8.97□□□□□ -0.97
PTPRM-207ENST00000578571 PURBQ96QR8 312 aaKnown RBP8.97□□□□□ -0.97
PTPRM-207ENST00000578571 ZNF395Q9H8N7 513 aaPredicted RBP8.97□□□□□ -0.97
PTPRM-207ENST00000578571 ZBTB7BO15156 539 aaPredicted RBP8.96□□□□□ -0.98
PTPRM-207ENST00000578571 SPINT1O43278 529 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 UPP2O95045 317 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 GNRH1P01148 92 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 C6orf118Q5T5N4 469 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 ZFP42Q96MM3 310 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 KIAA1024Q9UPX6 916 aa8.96□□□□□ -0.98
PTPRM-207ENST00000578571 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-207ENST00000578571 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 BMP2P12643 396 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 SCNN1DP51172 638 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 SCARF1Q14162 830 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 TRIM50Q86XT4 487 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 OGFOD1Q8N543 542 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 VRTNQ9H8Y1 702 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 ETNK1Q9HBU6 452 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
PTPRM-207ENST00000578571 TMEM229AB2RXF0 380 aa8.94□□□□□ -0.98
PTPRM-207ENST00000578571 IL2RAP01589 272 aa8.94□□□□□ -0.98
PTPRM-207ENST00000578571 CRTC2Q53ET0 693 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-207ENST00000578571 CDCA8Q53HL2 280 aa8.94□□□□□ -0.98
PTPRM-207ENST00000578571 INSM2Q96T92 566 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-207ENST00000578571 ARID3AQ99856 593 aa8.94□□□□□ -0.98
PTPRM-207ENST00000578571 DNAAF2Q9NVR5 837 aaKnown RBP8.94□□□□□ -0.98
PTPRM-207ENST00000578571 GMPR2Q9P2T1 348 aaKnown RBP8.94□□□□□ -0.98
PTPRM-207ENST00000578571 BAZ1AQ9NRL2 1556 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-207ENST00000578571 DKK1O94907 266 aa8.93□□□□□ -0.98
PTPRM-207ENST00000578571 RASA1P20936 1047 aa8.93□□□□□ -0.98
PTPRM-207ENST00000578571 ATP1A2P50993 1020 aa8.93□□□□□ -0.98
PTPRM-207ENST00000578571 CLN3Q13286 438 aa8.93□□□□□ -0.98
PTPRM-207ENST00000578571 HRH3Q9Y5N1 445 aa8.93□□□□□ -0.98
PTPRM-207ENST00000578571 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
PTPRM-207ENST00000578571 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 POTECB2RU33 542 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 WASLO00401 505 aaPredicted RBP8.92□□□□□ -0.98
PTPRM-207ENST00000578571 CTSOP43234 321 aaPredicted RBP8.92□□□□□ -0.98
PTPRM-207ENST00000578571 GDF10P55107 478 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 PTK7Q13308 1070 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 LARGE2Q8N3Y3 721 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 XAGE2Q96GT9 111 aa8.92□□□□□ -0.98
PTPRM-207ENST00000578571 ZNF594Q96JF6 807 aaPredicted RBP8.92□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L15C9J2P7 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L10C9JJH3 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L13C9JLJ4 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L12C9JPN9 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L11C9JVI0 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L21D6R901 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L18D6R9N7 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L22D6RA61 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L17D6RBQ6 530 aa8.91□□□□□ -0.98
PTPRM-207ENST00000578571 USP17L19D6RCP7 530 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms