RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
CTC1-205ENST00000578537 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
CTC1-205ENST00000578537 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 EVA1CP58658 441 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
CTC1-205ENST00000578537 CARD10Q9BWT7 1032 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 USP35Q9P2H5 1018 aa17.21■□□□□ 0.35
CTC1-205ENST00000578537 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
CTC1-205ENST00000578537 FCHSD2O94868 740 aa17.2■□□□□ 0.34
CTC1-205ENST00000578537 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
CTC1-205ENST00000578537 APAF1O14727 1248 aa17.19■□□□□ 0.34
CTC1-205ENST00000578537 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
CTC1-205ENST00000578537 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
CTC1-205ENST00000578537 SIPA1L3O60292 1781 aaPredicted RBP17.18■□□□□ 0.34
CTC1-205ENST00000578537 VPS72Q15906 364 aa17.18■□□□□ 0.34
CTC1-205ENST00000578537 LRP5O75197 1615 aa17.18■□□□□ 0.34
CTC1-205ENST00000578537 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
CTC1-205ENST00000578537 DOT1LQ8TEK3 1739 aa17.16■□□□□ 0.34
CTC1-205ENST00000578537 MTHFSDQ2M296 383 aaKnown RBP17.16■□□□□ 0.34
CTC1-205ENST00000578537 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
CTC1-205ENST00000578537 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTC1-205ENST00000578537 ITGB4P16144 1822 aa17.14■□□□□ 0.34
CTC1-205ENST00000578537 TMPOP42166 694 aaKnown RBP17.14■□□□□ 0.33
CTC1-205ENST00000578537 DEFB132Q7Z7B7 95 aa17.14■□□□□ 0.33
CTC1-205ENST00000578537 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
CTC1-205ENST00000578537 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
CTC1-205ENST00000578537 IL2RBP14784 551 aa17.13■□□□□ 0.33
CTC1-205ENST00000578537 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
CTC1-205ENST00000578537 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
CTC1-205ENST00000578537 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
CTC1-205ENST00000578537 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
CTC1-205ENST00000578537 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
CTC1-205ENST00000578537 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
CTC1-205ENST00000578537 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
CTC1-205ENST00000578537 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
CTC1-205ENST00000578537 SBF2Q86WG5 1849 aa17.11■□□□□ 0.33
CTC1-205ENST00000578537 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
CTC1-205ENST00000578537 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
CTC1-205ENST00000578537 CYP27B1O15528 508 aa17.1■□□□□ 0.33
CTC1-205ENST00000578537 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
CTC1-205ENST00000578537 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
CTC1-205ENST00000578537 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
CTC1-205ENST00000578537 MAP3K5Q99683 1374 aa17.1■□□□□ 0.33
CTC1-205ENST00000578537 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
CTC1-205ENST00000578537 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
CTC1-205ENST00000578537 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
CTC1-205ENST00000578537 MRC1P22897 1456 aa17.09■□□□□ 0.33
CTC1-205ENST00000578537 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
CTC1-205ENST00000578537 RIPK4P57078 832 aa17.08■□□□□ 0.32
CTC1-205ENST00000578537 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
CTC1-205ENST00000578537 ZBED9Q6R2W3 1325 aa17.07■□□□□ 0.32
CTC1-205ENST00000578537 PLEKHO1Q53GL0 409 aaPredicted RBP17.07■□□□□ 0.32
CTC1-205ENST00000578537 SEPT12Q8IYM1 358 aa17.07■□□□□ 0.32
CTC1-205ENST00000578537 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
CTC1-205ENST00000578537 PHKG2P15735 406 aa17.06■□□□□ 0.32
CTC1-205ENST00000578537 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
CTC1-205ENST00000578537 ZCRB1Q8TBF4 217 aaKnown RBP17.06■□□□□ 0.32
CTC1-205ENST00000578537 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
CTC1-205ENST00000578537 MCM10Q7L590 875 aa17.05■□□□□ 0.32
CTC1-205ENST00000578537 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
CTC1-205ENST00000578537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.328e-7■■■□□ 14.7
CTC1-205ENST00000578537 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 ONECUT3O60422 494 aaPredicted RBP17.04■□□□□ 0.32
CTC1-205ENST00000578537 AMOTQ4VCS5 1084 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 LGR6Q9HBX8 967 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 NHSQ6T4R5 1651 aa17.04■□□□□ 0.32
CTC1-205ENST00000578537 UBR2Q8IWV8 1755 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 MPRIPQ6WCQ1 1025 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
CTC1-205ENST00000578537 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 SPG7Q9UQ90 795 aa17.03■□□□□ 0.32
CTC1-205ENST00000578537 PSDA5PKW4 1024 aaPredicted RBP17.02■□□□□ 0.32
CTC1-205ENST00000578537 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
CTC1-205ENST00000578537 NEFMP07197 916 aa17.02■□□□□ 0.32
CTC1-205ENST00000578537 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
CTC1-205ENST00000578537 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
CTC1-205ENST00000578537 C5P01031 1676 aa17.01■□□□□ 0.31
CTC1-205ENST00000578537 BTAF1O14981 1849 aa17.01■□□□□ 0.31
CTC1-205ENST00000578537 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
CTC1-205ENST00000578537 DDB1Q16531 1140 aa17.01■□□□□ 0.31
CTC1-205ENST00000578537 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
CTC1-205ENST00000578537 CDCA7Q9BWT1 371 aaPredicted RBP17.01■□□□□ 0.31
CTC1-205ENST00000578537 FAM182BQ5T319 152 aa17■□□□□ 0.31
CTC1-205ENST00000578537 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
CTC1-205ENST00000578537 A0A0G2JS52 829 aa16.99■□□□□ 0.31
CTC1-205ENST00000578537 MYT1Q01538 1121 aa16.99■□□□□ 0.31
CTC1-205ENST00000578537 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
CTC1-205ENST00000578537 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
CTC1-205ENST00000578537 EXOC5O00471 708 aa16.98■□□□□ 0.31
CTC1-205ENST00000578537 BAG6P46379 1132 aa16.98■□□□□ 0.31
CTC1-205ENST00000578537 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
CTC1-205ENST00000578537 TNS1Q9HBL0 1735 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms