RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PEAK1Q9H792 1746 aa14.15□□□□□ -0.14
SKA2-204ENST00000578519 KDM2BQ8NHM5 1336 aa14.15□□□□□ -0.15
SKA2-204ENST00000578519 MTHFSDQ2M296 383 aaKnown RBP14.14□□□□□ -0.15
SKA2-204ENST00000578519 PLEKHO1Q53GL0 409 aaPredicted RBP14.14□□□□□ -0.15
SKA2-204ENST00000578519 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
SKA2-204ENST00000578519 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
SKA2-204ENST00000578519 LTV1Q96GA3 475 aaPredicted RBP14.14□□□□□ -0.15
SKA2-204ENST00000578519 RGPD1P0DJD0 1748 aa14.14□□□□□ -0.15
SKA2-204ENST00000578519 USP19O94966 1318 aa14.14□□□□□ -0.15
SKA2-204ENST00000578519 ZBTB7CA1YPR0 619 aa14.13□□□□□ -0.15
SKA2-204ENST00000578519 KCNA4P22459 653 aa14.13□□□□□ -0.15
SKA2-204ENST00000578519 HSPA2P54652 639 aa14.13□□□□□ -0.15
SKA2-204ENST00000578519 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
SKA2-204ENST00000578519 THUMPD2Q9BTF0 503 aaKnown RBP14.13□□□□□ -0.15
SKA2-204ENST00000578519 TRIM27P14373 513 aa14.12□□□□□ -0.15
SKA2-204ENST00000578519 ITPRIPQ8IWB1 547 aa14.12□□□□□ -0.15
SKA2-204ENST00000578519 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
SKA2-204ENST00000578519 SLIT3O75094 1523 aa14.11□□□□□ -0.15
SKA2-204ENST00000578519 KDM4FA0A1W2PPD8 638 aa14.11□□□□□ -0.15
SKA2-204ENST00000578519 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
SKA2-204ENST00000578519 MCM10Q7L590 875 aa14.11□□□□□ -0.15
SKA2-204ENST00000578519 NFAT5O94916 1531 aa14.1□□□□□ -0.15
SKA2-204ENST00000578519 MAP3K5Q99683 1374 aa14.1□□□□□ -0.15
SKA2-204ENST00000578519 DCTN1Q14203 1278 aa14.1□□□□□ -0.15
SKA2-204ENST00000578519 TAF7Q15545 349 aaPredicted RBP14.1□□□□□ -0.15
SKA2-204ENST00000578519 C1orf141Q5JVX7 400 aa14.09□□□□□ -0.15
SKA2-204ENST00000578519 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
SKA2-204ENST00000578519 PTPRCP08575 1304 aa14.09□□□□□ -0.15
SKA2-204ENST00000578519 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.15
SKA2-204ENST00000578519 CRB1P82279 1406 aa14.08□□□□□ -0.15
SKA2-204ENST00000578519 RLBP1P12271 317 aa14.08□□□□□ -0.16
SKA2-204ENST00000578519 ANP32AP39687 249 aaKnown RBP14.08□□□□□ -0.16
SKA2-204ENST00000578519 XPCQ01831 940 aaPredicted RBP14.08□□□□□ -0.16
SKA2-204ENST00000578519 AKAP4Q5JQC9 854 aa14.08□□□□□ -0.16
SKA2-204ENST00000578519 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
SKA2-204ENST00000578519 STK31Q9BXU1 1019 aa14.08□□□□□ -0.16
SKA2-204ENST00000578519 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
SKA2-204ENST00000578519 ELL2O00472 640 aaPredicted RBP14.07□□□□□ -0.16
SKA2-204ENST00000578519 HDAC1Q13547 482 aaPredicted RBP14.07□□□□□ -0.16
SKA2-204ENST00000578519 CCDC30Q5VVM6 783 aa14.07□□□□□ -0.16
SKA2-204ENST00000578519 TMEM57Q8N5G2 664 aa14.07□□□□□ -0.16
SKA2-204ENST00000578519 LMTK3Q96Q04 1460 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 CAPN15O75808 1086 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 PDE4AP27815 886 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 NBPF6Q5VWK0 638 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 TSPYL6Q8N831 410 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 NBPF4Q96M43 638 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 TNS3Q68CZ2 1445 aa14.06□□□□□ -0.16
SKA2-204ENST00000578519 MARF1Q9Y4F3 1742 aaKnown RBP14.05□□□□□ -0.16
SKA2-204ENST00000578519 TEFQ10587 303 aa14.05□□□□□ -0.16
SKA2-204ENST00000578519 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
SKA2-204ENST00000578519 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
SKA2-204ENST00000578519 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
SKA2-204ENST00000578519 IGHDP01880 384 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 HOXB7P09629 217 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 FAM161AQ3B820 660 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
SKA2-204ENST00000578519 RAPGEF4Q8WZA2 1011 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 ZBTB40Q9NUA8 1239 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 ABCC6O95255 1503 aa14.04□□□□□ -0.16
SKA2-204ENST00000578519 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
SKA2-204ENST00000578519 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
SKA2-204ENST00000578519 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SKA2-204ENST00000578519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.03□□□□□ -0.16
SKA2-204ENST00000578519 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
SKA2-204ENST00000578519 PCDHB15Q9Y5E8 787 aa14.03□□□□□ -0.16
SKA2-204ENST00000578519 ABCC4O15439 1325 aa14.03□□□□□ -0.16
SKA2-204ENST00000578519 LTN1O94822 1766 aa14.03□□□□□ -0.16
SKA2-204ENST00000578519 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
SKA2-204ENST00000578519 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.17
SKA2-204ENST00000578519 IL17REQ8NFR9 667 aa14.02□□□□□ -0.17
SKA2-204ENST00000578519 TNNQ9UQP3 1299 aa14.02□□□□□ -0.17
SKA2-204ENST00000578519 OVOS2A0A0G2JMS6 1433 aa14.01□□□□□ -0.17
SKA2-204ENST00000578519 ZBTB7BO15156 539 aaPredicted RBP14.01□□□□□ -0.17
SKA2-204ENST00000578519 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
SKA2-204ENST00000578519 HSP90AB1P08238 724 aaKnown RBP14.01□□□□□ -0.17
SKA2-204ENST00000578519 RGS3P49796 1198 aa14.01□□□□□ -0.17
SKA2-204ENST00000578519 CCT4P50991 539 aaKnown RBP14.01□□□□□ -0.17
SKA2-204ENST00000578519 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
SKA2-204ENST00000578519 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
SKA2-204ENST00000578519 GCC1Q96CN9 775 aa14.01□□□□□ -0.17
SKA2-204ENST00000578519 ZBTB47Q9UFB7 747 aaPredicted RBP14.01□□□□□ -0.17
SKA2-204ENST00000578519 CPDO75976 1380 aa14□□□□□ -0.17
SKA2-204ENST00000578519 ERBB3P21860 1342 aa14□□□□□ -0.17
SKA2-204ENST00000578519 EIF5BO60841 1220 aaKnown RBP14□□□□□ -0.17
SKA2-204ENST00000578519 ERICH6Q7L0X2 663 aa14□□□□□ -0.17
SKA2-204ENST00000578519 NLRP2Q9NX02 1062 aa14□□□□□ -0.17
SKA2-204ENST00000578519 ALS2Q96Q42 1657 aa14□□□□□ -0.17
SKA2-204ENST00000578519 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
SKA2-204ENST00000578519 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
SKA2-204ENST00000578519 LRRC59Q96AG4 307 aaKnown RBP13.99□□□□□ -0.17
SKA2-204ENST00000578519 SOS2Q07890 1332 aaPredicted RBP13.98□□□□□ -0.17
SKA2-204ENST00000578519 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
SKA2-204ENST00000578519 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
SKA2-204ENST00000578519 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
SKA2-204ENST00000578519 DDRGK1Q96HY6 314 aa13.98□□□□□ -0.17
SKA2-204ENST00000578519 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
SKA2-204ENST00000578519 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms