RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 PTF1AQ7RTS3 328 aa23.46■■□□□ 1.35
TMEM220-203ENST00000578345 RAPGEF4Q8WZA2 1011 aa23.45■■□□□ 1.34
TMEM220-203ENST00000578345 EIF4A2Q14240 407 aaKnown RBP23.44■■□□□ 1.34
TMEM220-203ENST00000578345 MARCH10Q8NA82 808 aaPredicted RBP23.44■■□□□ 1.34
TMEM220-203ENST00000578345 TATP17735 454 aaPredicted RBP23.42■■□□□ 1.34
TMEM220-203ENST00000578345 BCL9O00512 1426 aa23.42■■□□□ 1.34
TMEM220-203ENST00000578345 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
TMEM220-203ENST00000578345 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
TMEM220-203ENST00000578345 EYA1Q99502 592 aa23.41■■□□□ 1.34
TMEM220-203ENST00000578345 RALBP1Q15311 655 aa23.39■■□□□ 1.33
TMEM220-203ENST00000578345 TNS2Q63HR2 1409 aa23.39■■□□□ 1.33
TMEM220-203ENST00000578345 RGPD2P0DJD1 1756 aa23.38■■□□□ 1.33
TMEM220-203ENST00000578345 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
TMEM220-203ENST00000578345 PPP2R1AP30153 589 aa23.38■■□□□ 1.33
TMEM220-203ENST00000578345 ZCRB1Q8TBF4 217 aaKnown RBP23.37■■□□□ 1.33
TMEM220-203ENST00000578345 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
TMEM220-203ENST00000578345 PLSCR1O15162 318 aa23.36■■□□□ 1.33
TMEM220-203ENST00000578345 IL13P35225 146 aa23.36■■□□□ 1.33
TMEM220-203ENST00000578345 ANO8Q9HCE9 1232 aaPredicted RBP23.36■■□□□ 1.33
TMEM220-203ENST00000578345 NBPF14Q5TI25 921 aa23.34■■□□□ 1.33
TMEM220-203ENST00000578345 IGSF1Q8N6C5 1336 aa23.33■■□□□ 1.33
TMEM220-203ENST00000578345 PROM2Q8N271 834 aa23.33■■□□□ 1.33
TMEM220-203ENST00000578345 DDX54Q8TDD1 881 aaKnown RBP23.33■■□□□ 1.33
TMEM220-203ENST00000578345 NUDCQ9Y266 331 aa23.33■■□□□ 1.33
TMEM220-203ENST00000578345 CASZ1Q86V15 1759 aa23.32■■□□□ 1.32
TMEM220-203ENST00000578345 SPG7Q9UQ90 795 aa23.32■■□□□ 1.32
TMEM220-203ENST00000578345 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
TMEM220-203ENST00000578345 SULT6B1Q6IMI4 303 aa23.3■■□□□ 1.32
TMEM220-203ENST00000578345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.3■■□□□ 1.32
TMEM220-203ENST00000578345 NCAPD2Q15021 1401 aa23.3■■□□□ 1.32
TMEM220-203ENST00000578345 MEGF6O75095 1541 aa23.29■■□□□ 1.32
TMEM220-203ENST00000578345 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
TMEM220-203ENST00000578345 KCNQ2O43526 872 aa23.28■■□□□ 1.32
TMEM220-203ENST00000578345 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
TMEM220-203ENST00000578345 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
TMEM220-203ENST00000578345 PLEKHO1Q53GL0 409 aaPredicted RBP23.27■■□□□ 1.32
TMEM220-203ENST00000578345 PLEKHG2Q9H7P9 1386 aa23.27■■□□□ 1.31
TMEM220-203ENST00000578345 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
TMEM220-203ENST00000578345 PDGFDQ9GZP0 370 aaPredicted RBP23.26■■□□□ 1.31
TMEM220-203ENST00000578345 MYBBP1AQ9BQG0 1328 aaKnown RBP23.26■■□□□ 1.31
TMEM220-203ENST00000578345 BTAF1O14981 1849 aa23.24■■□□□ 1.31
TMEM220-203ENST00000578345 KAT6BQ8WYB5 2073 aa23.24■■□□□ 1.31
TMEM220-203ENST00000578345 HMOX1P09601 288 aa23.23■■□□□ 1.31
TMEM220-203ENST00000578345 TXNRD1Q16881 649 aa23.23■■□□□ 1.31
TMEM220-203ENST00000578345 AEBP1Q8IUX7 1158 aa23.23■■□□□ 1.31
TMEM220-203ENST00000578345 ACSBG1Q96GR2 724 aa23.23■■□□□ 1.31
TMEM220-203ENST00000578345 PRKRIP1Q9H875 184 aaPredicted RBP23.23■■□□□ 1.31
TMEM220-203ENST00000578345 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
TMEM220-203ENST00000578345 IFNL2Q8IZJ0 200 aa23.22■■□□□ 1.31
TMEM220-203ENST00000578345 KDRP35968 1356 aa23.22■■□□□ 1.31
TMEM220-203ENST00000578345 PAPPAQ13219 1627 aa23.22■■□□□ 1.31
TMEM220-203ENST00000578345 COL3A1P02461 1466 aaPredicted RBP23.21■■□□□ 1.31
TMEM220-203ENST00000578345 U2AF1L5P0DN76 240 aaPredicted RBP23.2■■□□□ 1.3
TMEM220-203ENST00000578345 U2AF1Q01081 240 aaKnown RBP eCLIP23.2■■□□□ 1.3
TMEM220-203ENST00000578345 UTRNP46939 3433 aa23.2■■□□□ 1.3
TMEM220-203ENST00000578345 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
TMEM220-203ENST00000578345 ANP32CO43423 234 aa23.19■■□□□ 1.3
TMEM220-203ENST00000578345 CYP27B1O15528 508 aa23.18■■□□□ 1.3
TMEM220-203ENST00000578345 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
TMEM220-203ENST00000578345 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
TMEM220-203ENST00000578345 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
TMEM220-203ENST00000578345 SYTL4Q96C24 671 aaPredicted RBP23.17■■□□□ 1.3
TMEM220-203ENST00000578345 NEFMP07197 916 aa23.16■■□□□ 1.3
TMEM220-203ENST00000578345 PHKG2P15735 406 aa23.16■■□□□ 1.3
TMEM220-203ENST00000578345 PKD1L3Q7Z443 1732 aa23.16■■□□□ 1.3
TMEM220-203ENST00000578345 FCHSD2O94868 740 aa23.15■■□□□ 1.3
TMEM220-203ENST00000578345 PRIM1P49642 420 aaKnown RBP23.15■■□□□ 1.3
TMEM220-203ENST00000578345 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
TMEM220-203ENST00000578345 PNNQ9H307 717 aaKnown RBP23.15■■□□□ 1.3
TMEM220-203ENST00000578345 ZBTB7AO95365 584 aa23.14■■□□□ 1.29
TMEM220-203ENST00000578345 SLC15A2Q16348 729 aa23.14■■□□□ 1.29
TMEM220-203ENST00000578345 PPP1R1BQ9UD71 204 aaPredicted RBP23.14■■□□□ 1.29
TMEM220-203ENST00000578345 PTGER2P43116 358 aa23.13■■□□□ 1.29
TMEM220-203ENST00000578345 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
TMEM220-203ENST00000578345 DOT1LQ8TEK3 1739 aa23.13■■□□□ 1.29
TMEM220-203ENST00000578345 PRKAR2BP31323 418 aa23.11■■□□□ 1.29
TMEM220-203ENST00000578345 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
TMEM220-203ENST00000578345 GAS2L2Q8NHY3 880 aa23.11■■□□□ 1.29
TMEM220-203ENST00000578345 DCAF5Q96JK2 942 aa23.11■■□□□ 1.29
TMEM220-203ENST00000578345 LRRC4BQ9NT99 713 aa23.11■■□□□ 1.29
TMEM220-203ENST00000578345 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
TMEM220-203ENST00000578345 WDR43Q15061 677 aaKnown RBP eCLIP23.09■■□□□ 1.29
TMEM220-203ENST00000578345 ZNF827Q17R98 1081 aa23.09■■□□□ 1.29
TMEM220-203ENST00000578345 MTHFSDQ2M296 383 aaKnown RBP23.08■■□□□ 1.29
TMEM220-203ENST00000578345 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.29
TMEM220-203ENST00000578345 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.29
TMEM220-203ENST00000578345 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
TMEM220-203ENST00000578345 SGIP1Q9BQI5 828 aa23.07■■□□□ 1.28
TMEM220-203ENST00000578345 TMOD3Q9NYL9 352 aa23.07■■□□□ 1.28
TMEM220-203ENST00000578345 TUBGCP6Q96RT7 1819 aa23.06■■□□□ 1.28
TMEM220-203ENST00000578345 LY75O60449 1722 aa23.05■■□□□ 1.28
TMEM220-203ENST00000578345 GOLGB1Q14789 3259 aaKnown RBP23.04■■□□□ 1.28
TMEM220-203ENST00000578345 CABP4P57796 275 aa23.04■■□□□ 1.28
TMEM220-203ENST00000578345 QSER1Q2KHR3 1735 aa23.04■■□□□ 1.28
TMEM220-203ENST00000578345 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
TMEM220-203ENST00000578345 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
TMEM220-203ENST00000578345 MTFR1LQ9H019 292 aa23.03■■□□□ 1.28
TMEM220-203ENST00000578345 MAPK8IP3Q9UPT6 1336 aa23.03■■□□□ 1.28
TMEM220-203ENST00000578345 GNAT3A8MTJ3 354 aa23.02■■□□□ 1.28
TMEM220-203ENST00000578345 PIGBQ92521 554 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms