RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
IFT20-206ENST00000578122 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
IFT20-206ENST00000578122 EYA1Q99502 592 aa20.78■□□□□ 0.92
IFT20-206ENST00000578122 SOCS7O14512 581 aa20.77■□□□□ 0.92
IFT20-206ENST00000578122 ZBTB22O15209 634 aa20.77■□□□□ 0.92
IFT20-206ENST00000578122 DDB1Q16531 1140 aa20.77■□□□□ 0.92
IFT20-206ENST00000578122 EXOC5O00471 708 aa20.76■□□□□ 0.91
IFT20-206ENST00000578122 POLA2Q14181 598 aa20.76■□□□□ 0.91
IFT20-206ENST00000578122 RALBP1Q15311 655 aa20.76■□□□□ 0.91
IFT20-206ENST00000578122 IL13P35225 146 aa20.75■□□□□ 0.91
IFT20-206ENST00000578122 NCAPD2Q15021 1401 aa20.75■□□□□ 0.91
IFT20-206ENST00000578122 RAPGEF4Q8WZA2 1011 aa20.74■□□□□ 0.91
IFT20-206ENST00000578122 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
IFT20-206ENST00000578122 DIAPH1O60610 1272 aaKnown RBP20.73■□□□□ 0.91
IFT20-206ENST00000578122 FAM182BQ5T319 152 aa20.73■□□□□ 0.91
IFT20-206ENST00000578122 IGSF1Q8N6C5 1336 aa20.73■□□□□ 0.91
IFT20-206ENST00000578122 MEGF6O75095 1541 aa20.73■□□□□ 0.91
IFT20-206ENST00000578122 TNS2Q63HR2 1409 aa20.72■□□□□ 0.91
IFT20-206ENST00000578122 TATP17735 454 aaPredicted RBP20.72■□□□□ 0.91
IFT20-206ENST00000578122 COL3A1P02461 1466 aaPredicted RBP20.72■□□□□ 0.91
IFT20-206ENST00000578122 RGPD1P0DJD0 1748 aa20.72■□□□□ 0.91
IFT20-206ENST00000578122 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
IFT20-206ENST00000578122 MARCH10Q8NA82 808 aaPredicted RBP20.7■□□□□ 0.9
IFT20-206ENST00000578122 ATF5Q9Y2D1 282 aaPredicted RBP20.7■□□□□ 0.9
IFT20-206ENST00000578122 FAM196AQ6ZSG2 479 aa20.69■□□□□ 0.9
IFT20-206ENST00000578122 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
IFT20-206ENST00000578122 UPF1Q92900 1129 aaKnown RBP eCLIP20.68■□□□□ 0.9
IFT20-206ENST00000578122 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
IFT20-206ENST00000578122 SHANK3Q9BYB0 1731 aa20.67■□□□□ 0.9
IFT20-206ENST00000578122 SULT6B1Q6IMI4 303 aa20.67■□□□□ 0.9
IFT20-206ENST00000578122 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
IFT20-206ENST00000578122 MYBBP1AQ9BQG0 1328 aaKnown RBP20.67■□□□□ 0.9
IFT20-206ENST00000578122 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
IFT20-206ENST00000578122 AEBP1Q8IUX7 1158 aa20.66■□□□□ 0.9
IFT20-206ENST00000578122 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
IFT20-206ENST00000578122 PKD1L3Q7Z443 1732 aa20.65■□□□□ 0.9
IFT20-206ENST00000578122 NUDCQ9Y266 331 aa20.65■□□□□ 0.9
IFT20-206ENST00000578122 SBF2Q86WG5 1849 aa20.64■□□□□ 0.9
IFT20-206ENST00000578122 KDRP35968 1356 aa20.64■□□□□ 0.89
IFT20-206ENST00000578122 HMOX1P09601 288 aa20.63■□□□□ 0.89
IFT20-206ENST00000578122 SPG7Q9UQ90 795 aa20.63■□□□□ 0.89
IFT20-206ENST00000578122 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
IFT20-206ENST00000578122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
IFT20-206ENST00000578122 BCL9O00512 1426 aa20.61■□□□□ 0.89
IFT20-206ENST00000578122 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
IFT20-206ENST00000578122 PCDH11XQ9BZA7 1347 aa20.61■□□□□ 0.89
IFT20-206ENST00000578122 PCDH11YQ9BZA8 1340 aa20.61■□□□□ 0.89
IFT20-206ENST00000578122 ANP32CO43423 234 aa20.6■□□□□ 0.89
IFT20-206ENST00000578122 TRIM37O94972 964 aa20.6■□□□□ 0.89
IFT20-206ENST00000578122 PLEKHO1Q53GL0 409 aaPredicted RBP20.6■□□□□ 0.89
IFT20-206ENST00000578122 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
IFT20-206ENST00000578122 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
IFT20-206ENST00000578122 SF3B2Q13435 895 aaKnown RBP20.59■□□□□ 0.89
IFT20-206ENST00000578122 CYP27B1O15528 508 aa20.58■□□□□ 0.89
IFT20-206ENST00000578122 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
IFT20-206ENST00000578122 TNS1Q9HBL0 1735 aaKnown RBP20.58■□□□□ 0.88
IFT20-206ENST00000578122 ACSBG1Q96GR2 724 aa20.56■□□□□ 0.88
IFT20-206ENST00000578122 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
IFT20-206ENST00000578122 IFNL2Q8IZJ0 200 aa20.55■□□□□ 0.88
IFT20-206ENST00000578122 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
IFT20-206ENST00000578122 NHSQ6T4R5 1651 aa20.54■□□□□ 0.88
IFT20-206ENST00000578122 PHKG2P15735 406 aa20.54■□□□□ 0.88
IFT20-206ENST00000578122 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
IFT20-206ENST00000578122 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
IFT20-206ENST00000578122 KCNQ2O43526 872 aa20.53■□□□□ 0.88
IFT20-206ENST00000578122 FCHSD2O94868 740 aa20.53■□□□□ 0.88
IFT20-206ENST00000578122 PRKAR2BP31323 418 aa20.53■□□□□ 0.88
IFT20-206ENST00000578122 NKX1-1Q15270 411 aaPredicted RBP20.53■□□□□ 0.88
IFT20-206ENST00000578122 PTF1AQ7RTS3 328 aa20.53■□□□□ 0.88
IFT20-206ENST00000578122 APBA3O96018 575 aa20.52■□□□□ 0.88
IFT20-206ENST00000578122 BAG6P46379 1132 aa20.52■□□□□ 0.88
IFT20-206ENST00000578122 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
IFT20-206ENST00000578122 C1orf141Q5JVX7 400 aa20.51■□□□□ 0.87
IFT20-206ENST00000578122 DEFB132Q7Z7B7 95 aa20.51■□□□□ 0.87
IFT20-206ENST00000578122 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
IFT20-206ENST00000578122 BTAF1O14981 1849 aa20.5■□□□□ 0.87
IFT20-206ENST00000578122 ITGB4P16144 1822 aa20.5■□□□□ 0.87
IFT20-206ENST00000578122 TOGARAM1Q9Y4F4 1720 aa20.5■□□□□ 0.87
IFT20-206ENST00000578122 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
IFT20-206ENST00000578122 SYTL4Q96C24 671 aaPredicted RBP20.49■□□□□ 0.87
IFT20-206ENST00000578122 RBM42Q9BTD8 480 aaKnown RBP20.49■□□□□ 0.87
IFT20-206ENST00000578122 PHACTR3Q96KR7 559 aa20.48■□□□□ 0.87
IFT20-206ENST00000578122 EN1Q05925 392 aaPredicted RBP20.47■□□□□ 0.87
IFT20-206ENST00000578122 WDR43Q15061 677 aaKnown RBP eCLIP20.47■□□□□ 0.87
IFT20-206ENST00000578122 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
IFT20-206ENST00000578122 PNNQ9H307 717 aaKnown RBP20.47■□□□□ 0.87
IFT20-206ENST00000578122 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
IFT20-206ENST00000578122 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
IFT20-206ENST00000578122 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
IFT20-206ENST00000578122 VIRMAQ69YN4 1812 aaKnown RBP20.46■□□□□ 0.87
IFT20-206ENST00000578122 EP400Q96L91 3159 aa20.45■□□□□ 0.86
IFT20-206ENST00000578122 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
IFT20-206ENST00000578122 NEFMP07197 916 aa20.45■□□□□ 0.86
IFT20-206ENST00000578122 MPRIPQ6WCQ1 1025 aa20.45■□□□□ 0.86
IFT20-206ENST00000578122 PLSCR1O15162 318 aa20.44■□□□□ 0.86
IFT20-206ENST00000578122 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
IFT20-206ENST00000578122 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
IFT20-206ENST00000578122 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
IFT20-206ENST00000578122 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
IFT20-206ENST00000578122 EZH2Q15910 746 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms