RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 DDB1Q16531 1140 aa21.03■□□□□ 0.96
LITAF-218ENST00000576036 FAM182BQ5T319 152 aa21.02■□□□□ 0.96
LITAF-218ENST00000576036 KRT27Q7Z3Y8 459 aa21.02■□□□□ 0.96
LITAF-218ENST00000576036 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.96
LITAF-218ENST00000576036 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
LITAF-218ENST00000576036 DOT1LQ8TEK3 1739 aa21.01■□□□□ 0.95
LITAF-218ENST00000576036 PLEKHG2Q9H7P9 1386 aa21.01■□□□□ 0.95
LITAF-218ENST00000576036 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
LITAF-218ENST00000576036 TATP17735 454 aaPredicted RBP21.01■□□□□ 0.95
LITAF-218ENST00000576036 TNS1Q9HBL0 1735 aaKnown RBP21.01■□□□□ 0.95
LITAF-218ENST00000576036 EXOC5O00471 708 aa20.99■□□□□ 0.95
LITAF-218ENST00000576036 DIEXFQ68CQ4 756 aaKnown RBP20.99■□□□□ 0.95
LITAF-218ENST00000576036 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
LITAF-218ENST00000576036 RSPH6AQ9H0K4 717 aa20.99■□□□□ 0.95
LITAF-218ENST00000576036 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
LITAF-218ENST00000576036 NHSQ6T4R5 1651 aa20.98■□□□□ 0.95
LITAF-218ENST00000576036 ITGB4P16144 1822 aa20.97■□□□□ 0.95
LITAF-218ENST00000576036 BCL9O00512 1426 aa20.97■□□□□ 0.95
LITAF-218ENST00000576036 CYP27B1O15528 508 aa20.97■□□□□ 0.95
LITAF-218ENST00000576036 U2AF1L5P0DN76 240 aaPredicted RBP20.97■□□□□ 0.95
LITAF-218ENST00000576036 U2AF1Q01081 240 aaKnown RBP eCLIP20.97■□□□□ 0.95
LITAF-218ENST00000576036 NUDCQ9Y266 331 aa20.97■□□□□ 0.95
LITAF-218ENST00000576036 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
LITAF-218ENST00000576036 SCN11AQ9UI33 1791 aa20.96■□□□□ 0.95
LITAF-218ENST00000576036 PDE3BQ13370 1112 aa20.96■□□□□ 0.95
LITAF-218ENST00000576036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
LITAF-218ENST00000576036 KAT6BQ8WYB5 2073 aa20.96■□□□□ 0.95
LITAF-218ENST00000576036 EP400Q96L91 3159 aa20.96■□□□□ 0.95
LITAF-218ENST00000576036 PRKAR2BP31323 418 aa20.94■□□□□ 0.94
LITAF-218ENST00000576036 DDX54Q8TDD1 881 aaKnown RBP20.93■□□□□ 0.94
LITAF-218ENST00000576036 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
LITAF-218ENST00000576036 PCDH11XQ9BZA7 1347 aa20.93■□□□□ 0.94
LITAF-218ENST00000576036 PCDH11YQ9BZA8 1340 aa20.93■□□□□ 0.94
LITAF-218ENST00000576036 FCHSD2O94868 740 aa20.92■□□□□ 0.94
LITAF-218ENST00000576036 PLEKHF1Q96S99 279 aa20.92■□□□□ 0.94
LITAF-218ENST00000576036 BTAF1O14981 1849 aa20.92■□□□□ 0.94
LITAF-218ENST00000576036 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
LITAF-218ENST00000576036 KDM6AO15550 1401 aaPredicted RBP20.9■□□□□ 0.94
LITAF-218ENST00000576036 PHKG2P15735 406 aa20.9■□□□□ 0.94
LITAF-218ENST00000576036 MTHFSDQ2M296 383 aaKnown RBP20.9■□□□□ 0.94
LITAF-218ENST00000576036 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
LITAF-218ENST00000576036 PTF1AQ7RTS3 328 aa20.9■□□□□ 0.94
LITAF-218ENST00000576036 MRS2Q9HD23 443 aa20.9■□□□□ 0.94
LITAF-218ENST00000576036 NKX1-1Q15270 411 aaPredicted RBP20.89■□□□□ 0.93
LITAF-218ENST00000576036 AMOTQ4VCS5 1084 aa20.89■□□□□ 0.93
LITAF-218ENST00000576036 ZNF530Q6P9A1 599 aaPredicted RBP20.89■□□□□ 0.93
LITAF-218ENST00000576036 FAM196AQ6ZSG2 479 aa20.89■□□□□ 0.93
LITAF-218ENST00000576036 PNISRQ8TF01 805 aaKnown RBP20.89■□□□□ 0.93
LITAF-218ENST00000576036 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.93
LITAF-218ENST00000576036 SIPA1L3O60292 1781 aaPredicted RBP20.88■□□□□ 0.93
LITAF-218ENST00000576036 MIER1Q8N108 512 aa20.88■□□□□ 0.93
LITAF-218ENST00000576036 IFNL2Q8IZJ0 200 aa20.86■□□□□ 0.93
LITAF-218ENST00000576036 UPF1Q92900 1129 aaKnown RBP eCLIP20.86■□□□□ 0.93
LITAF-218ENST00000576036 KCNQ2O43526 872 aa20.85■□□□□ 0.93
LITAF-218ENST00000576036 WDR43Q15061 677 aaKnown RBP eCLIP20.85■□□□□ 0.93
LITAF-218ENST00000576036 RGPD3A6NKT7 1758 aaPredicted RBP20.85■□□□□ 0.93
LITAF-218ENST00000576036 RGPD4Q7Z3J3 1758 aa20.85■□□□□ 0.93
LITAF-218ENST00000576036 MRC1P22897 1456 aa20.84■□□□□ 0.93
LITAF-218ENST00000576036 ACSBG1Q96GR2 724 aa20.84■□□□□ 0.93
LITAF-218ENST00000576036 TRIM37O94972 964 aa20.83■□□□□ 0.93
LITAF-218ENST00000576036 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
LITAF-218ENST00000576036 CCER2I3L3R5 266 aa20.82■□□□□ 0.92
LITAF-218ENST00000576036 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
LITAF-218ENST00000576036 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
LITAF-218ENST00000576036 LY75O60449 1722 aa20.81■□□□□ 0.92
LITAF-218ENST00000576036 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
LITAF-218ENST00000576036 PAPPAQ13219 1627 aa20.81■□□□□ 0.92
LITAF-218ENST00000576036 RREB1Q92766 1687 aa20.8■□□□□ 0.92
LITAF-218ENST00000576036 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
LITAF-218ENST00000576036 MPRIPQ6WCQ1 1025 aa20.8■□□□□ 0.92
LITAF-218ENST00000576036 PRIM1P49642 420 aaKnown RBP20.79■□□□□ 0.92
LITAF-218ENST00000576036 RUNDC1Q96C34 613 aa20.79■□□□□ 0.92
LITAF-218ENST00000576036 BCL11BQ9C0K0 894 aaPredicted RBP20.79■□□□□ 0.92
LITAF-218ENST00000576036 LGR6Q9HBX8 967 aa20.79■□□□□ 0.92
LITAF-218ENST00000576036 NFE2L2Q16236 605 aa20.78■□□□□ 0.92
LITAF-218ENST00000576036 DCAF5Q96JK2 942 aa20.78■□□□□ 0.92
LITAF-218ENST00000576036 CEMIPQ8WUJ3 1361 aa20.77■□□□□ 0.92
LITAF-218ENST00000576036 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
LITAF-218ENST00000576036 HSP90AB1P08238 724 aaKnown RBP20.77■□□□□ 0.92
LITAF-218ENST00000576036 IL17REQ8NFR9 667 aa20.77■□□□□ 0.92
LITAF-218ENST00000576036 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
LITAF-218ENST00000576036 MAPK8IP3Q9UPT6 1336 aa20.76■□□□□ 0.91
LITAF-218ENST00000576036 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
LITAF-218ENST00000576036 UBR2Q8IWV8 1755 aa20.75■□□□□ 0.91
LITAF-218ENST00000576036 GNAT3A8MTJ3 354 aa20.75■□□□□ 0.91
LITAF-218ENST00000576036 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
LITAF-218ENST00000576036 CCDC125Q86Z20 511 aa20.75■□□□□ 0.91
LITAF-218ENST00000576036 DEFB132Q7Z7B7 95 aa20.74■□□□□ 0.91
LITAF-218ENST00000576036 PIGBQ92521 554 aa20.74■□□□□ 0.91
LITAF-218ENST00000576036 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
LITAF-218ENST00000576036 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
LITAF-218ENST00000576036 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
LITAF-218ENST00000576036 TAF1LQ8IZX4 1826 aa20.73■□□□□ 0.91
LITAF-218ENST00000576036 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
LITAF-218ENST00000576036 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
LITAF-218ENST00000576036 MCM10Q7L590 875 aa20.72■□□□□ 0.91
LITAF-218ENST00000576036 SYTL4Q96C24 671 aaPredicted RBP20.72■□□□□ 0.91
LITAF-218ENST00000576036 APAF1O14727 1248 aa20.71■□□□□ 0.91
LITAF-218ENST00000576036 APBA3O96018 575 aa20.71■□□□□ 0.91
LITAF-218ENST00000576036 SLC52A2Q9HAB3 445 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms