RNA–Protein interactions for RNA: ENST00000575643.1

PSMB6-204, Transcript of proteasome subunit beta 6, humanhuman

TSL 2

Gene PSMB6, Length 666 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6-204ENST00000575643 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
PSMB6-204ENST00000575643 CCER1Q8TC90 406 aaPredicted RBP18.42■□□□□ 0.54
PSMB6-204ENST00000575643 DDX54Q8TDD1 881 aaKnown RBP18.42■□□□□ 0.54
PSMB6-204ENST00000575643 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
PSMB6-204ENST00000575643 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
PSMB6-204ENST00000575643 HSP90AB2PQ58FF8 381 aa18.41■□□□□ 0.54
PSMB6-204ENST00000575643 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
PSMB6-204ENST00000575643 POLR3GLQ9BT43 218 aa18.4■□□□□ 0.54
PSMB6-204ENST00000575643 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
PSMB6-204ENST00000575643 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
PSMB6-204ENST00000575643 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
PSMB6-204ENST00000575643 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
PSMB6-204ENST00000575643 ZBTB7AO95365 584 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 SLC15A2Q16348 729 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 STK32BQ9NY57 414 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 CGNL1Q0VF96 1302 aa18.37■□□□□ 0.53
PSMB6-204ENST00000575643 ITGB4P16144 1822 aa18.36■□□□□ 0.53
PSMB6-204ENST00000575643 ZCRB1Q8TBF4 217 aaKnown RBP18.36■□□□□ 0.53
PSMB6-204ENST00000575643 C5P01031 1676 aa18.35■□□□□ 0.53
PSMB6-204ENST00000575643 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
PSMB6-204ENST00000575643 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
PSMB6-204ENST00000575643 PRIM1P49642 420 aaKnown RBP18.34■□□□□ 0.53
PSMB6-204ENST00000575643 PPP1R1BQ9UD71 204 aaPredicted RBP18.34■□□□□ 0.53
PSMB6-204ENST00000575643 PTGER2P43116 358 aa18.33■□□□□ 0.52
PSMB6-204ENST00000575643 KCNQ4P56696 695 aa18.33■□□□□ 0.52
PSMB6-204ENST00000575643 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
PSMB6-204ENST00000575643 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
PSMB6-204ENST00000575643 TAF1LQ8IZX4 1826 aa18.32■□□□□ 0.52
PSMB6-204ENST00000575643 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
PSMB6-204ENST00000575643 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
PSMB6-204ENST00000575643 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
PSMB6-204ENST00000575643 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
PSMB6-204ENST00000575643 ATF5Q9Y2D1 282 aaPredicted RBP18.31■□□□□ 0.52
PSMB6-204ENST00000575643 TNNT2P45379 298 aaPredicted RBP18.3■□□□□ 0.52
PSMB6-204ENST00000575643 POLKQ9UBT6 870 aa18.29■□□□□ 0.52
PSMB6-204ENST00000575643 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
PSMB6-204ENST00000575643 CYP27B1O15528 508 aa18.28■□□□□ 0.52
PSMB6-204ENST00000575643 AKT1S1Q96B36 256 aa18.28■□□□□ 0.52
PSMB6-204ENST00000575643 PANK3Q9H999 370 aa18.28■□□□□ 0.52
PSMB6-204ENST00000575643 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
PSMB6-204ENST00000575643 SGIP1Q9BQI5 828 aa18.27■□□□□ 0.52
PSMB6-204ENST00000575643 MTFR1LQ9H019 292 aa18.27■□□□□ 0.52
PSMB6-204ENST00000575643 EYA1Q99502 592 aa18.26■□□□□ 0.51
PSMB6-204ENST00000575643 PNPLA7Q6ZV29 1317 aa18.25■□□□□ 0.51
PSMB6-204ENST00000575643 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
PSMB6-204ENST00000575643 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
PSMB6-204ENST00000575643 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
PSMB6-204ENST00000575643 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
PSMB6-204ENST00000575643 FHDC1Q9C0D6 1143 aaPredicted RBP18.22■□□□□ 0.51
PSMB6-204ENST00000575643 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
PSMB6-204ENST00000575643 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
PSMB6-204ENST00000575643 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
PSMB6-204ENST00000575643 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
PSMB6-204ENST00000575643 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
PSMB6-204ENST00000575643 UTRNP46939 3433 aa18.19■□□□□ 0.5
PSMB6-204ENST00000575643 SPG7Q9UQ90 795 aa18.18■□□□□ 0.5
PSMB6-204ENST00000575643 ARXQ96QS3 562 aa18.17■□□□□ 0.5
PSMB6-204ENST00000575643 MAP3K5Q99683 1374 aa18.17■□□□□ 0.5
PSMB6-204ENST00000575643 PHKG2P15735 406 aa18.16■□□□□ 0.5
PSMB6-204ENST00000575643 NKX1-1Q15270 411 aaPredicted RBP18.16■□□□□ 0.5
PSMB6-204ENST00000575643 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
PSMB6-204ENST00000575643 PIGBQ92521 554 aa18.16■□□□□ 0.5
PSMB6-204ENST00000575643 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
PSMB6-204ENST00000575643 PLEKHG2Q9H7P9 1386 aa18.16■□□□□ 0.5
PSMB6-204ENST00000575643 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
PSMB6-204ENST00000575643 AMER1Q5JTC6 1135 aaPredicted RBP18.14■□□□□ 0.49
PSMB6-204ENST00000575643 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
PSMB6-204ENST00000575643 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
PSMB6-204ENST00000575643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.14■□□□□ 0.49
PSMB6-204ENST00000575643 COL5A3P25940 1745 aaPredicted RBP18.14■□□□□ 0.49
PSMB6-204ENST00000575643 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
PSMB6-204ENST00000575643 YY1P25490 414 aa18.13■□□□□ 0.49
PSMB6-204ENST00000575643 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
PSMB6-204ENST00000575643 COL23A1Q86Y22 540 aaPredicted RBP18.13■□□□□ 0.49
PSMB6-204ENST00000575643 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
PSMB6-204ENST00000575643 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
PSMB6-204ENST00000575643 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
PSMB6-204ENST00000575643 KLHL34Q8N239 644 aa18.12■□□□□ 0.49
PSMB6-204ENST00000575643 KDRP35968 1356 aa18.12■□□□□ 0.49
PSMB6-204ENST00000575643 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
PSMB6-204ENST00000575643 SCN11AQ9UI33 1791 aa18.12■□□□□ 0.49
PSMB6-204ENST00000575643 MSH5O43196 834 aa18.11■□□□□ 0.49
PSMB6-204ENST00000575643 SMIM5Q71RC9 77 aa18.11■□□□□ 0.49
PSMB6-204ENST00000575643 TMOD3Q9NYL9 352 aa18.11■□□□□ 0.49
PSMB6-204ENST00000575643 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
PSMB6-204ENST00000575643 CHD4Q14839 1912 aa18.1■□□□□ 0.49
PSMB6-204ENST00000575643 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
PSMB6-204ENST00000575643 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
PSMB6-204ENST00000575643 POLD1P28340 1107 aa18.09■□□□□ 0.49
PSMB6-204ENST00000575643 LINC00116Q8NCU8 138 aa18.09■□□□□ 0.49
PSMB6-204ENST00000575643 C4AP0C0L4 1744 aa18.09■□□□□ 0.49
PSMB6-204ENST00000575643 TJP1Q07157 1748 aa18.09■□□□□ 0.49
PSMB6-204ENST00000575643 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
PSMB6-204ENST00000575643 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
PSMB6-204ENST00000575643 SIK1P57059 783 aa18.08■□□□□ 0.48
PSMB6-204ENST00000575643 ITPK1Q13572 414 aa18.08■□□□□ 0.48
PSMB6-204ENST00000575643 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
PSMB6-204ENST00000575643 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms