RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 SYT17Q9BSW7 474 aa22.7■■□□□ 1.22
TMEM88-202ENST00000574668 LRRC4BQ9NT99 713 aa22.7■■□□□ 1.22
TMEM88-202ENST00000574668 FBLN1P23142 703 aa22.69■■□□□ 1.22
TMEM88-202ENST00000574668 DDX54Q8TDD1 881 aaKnown RBP22.69■■□□□ 1.22
TMEM88-202ENST00000574668 IP6K1Q92551 441 aa22.69■■□□□ 1.22
TMEM88-202ENST00000574668 PER1O15534 1290 aaPredicted RBP22.68■■□□□ 1.22
TMEM88-202ENST00000574668 UTRNP46939 3433 aa22.67■■□□□ 1.22
TMEM88-202ENST00000574668 KIF20BQ96Q89 1820 aa22.66■■□□□ 1.22
TMEM88-202ENST00000574668 NSD2O96028 1365 aa22.66■■□□□ 1.22
TMEM88-202ENST00000574668 CNGB1Q14028 1251 aaPredicted RBP22.65■■□□□ 1.22
TMEM88-202ENST00000574668 MAP3K19Q56UN5 1328 aa22.64■■□□□ 1.22
TMEM88-202ENST00000574668 AMER1Q5JTC6 1135 aaPredicted RBP22.64■■□□□ 1.21
TMEM88-202ENST00000574668 MORC1Q86VD1 984 aa22.64■■□□□ 1.21
TMEM88-202ENST00000574668 ARXQ96QS3 562 aa22.64■■□□□ 1.21
TMEM88-202ENST00000574668 HOXC9P31274 260 aa22.63■■□□□ 1.21
TMEM88-202ENST00000574668 KCNQ4P56696 695 aa22.63■■□□□ 1.21
TMEM88-202ENST00000574668 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
TMEM88-202ENST00000574668 AKT1S1Q96B36 256 aa22.62■■□□□ 1.21
TMEM88-202ENST00000574668 SYTL4Q96C24 671 aaPredicted RBP22.62■■□□□ 1.21
TMEM88-202ENST00000574668 FAM208AQ9UK61 1670 aaKnown RBP22.61■■□□□ 1.21
TMEM88-202ENST00000574668 TNNT2P45379 298 aaPredicted RBP22.6■■□□□ 1.21
TMEM88-202ENST00000574668 AMPHP49418 695 aa22.6■■□□□ 1.21
TMEM88-202ENST00000574668 PRIM1P49642 420 aaKnown RBP22.6■■□□□ 1.21
TMEM88-202ENST00000574668 ZNF784Q8NCA9 323 aaPredicted RBP22.59■■□□□ 1.21
TMEM88-202ENST00000574668 NPC1L1Q9UHC9 1359 aa22.59■■□□□ 1.21
TMEM88-202ENST00000574668 KAT6BQ8WYB5 2073 aa22.59■■□□□ 1.21
TMEM88-202ENST00000574668 MEGF6O75095 1541 aa22.58■■□□□ 1.21
TMEM88-202ENST00000574668 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
TMEM88-202ENST00000574668 RGPD2P0DJD1 1756 aa22.58■■□□□ 1.2
TMEM88-202ENST00000574668 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
TMEM88-202ENST00000574668 DOT1LQ8TEK3 1739 aa22.57■■□□□ 1.2
TMEM88-202ENST00000574668 RRS1Q15050 365 aaKnown RBP22.57■■□□□ 1.2
TMEM88-202ENST00000574668 KLHL34Q8N239 644 aa22.56■■□□□ 1.2
TMEM88-202ENST00000574668 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
TMEM88-202ENST00000574668 ZCRB1Q8TBF4 217 aaKnown RBP22.56■■□□□ 1.2
TMEM88-202ENST00000574668 SHANK3Q9BYB0 1731 aa22.56■■□□□ 1.2
TMEM88-202ENST00000574668 MAP3K5Q99683 1374 aa22.55■■□□□ 1.2
TMEM88-202ENST00000574668 TFCP2L1Q9NZI6 479 aa22.55■■□□□ 1.2
TMEM88-202ENST00000574668 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
TMEM88-202ENST00000574668 NBPF6Q5VWK0 638 aa22.54■■□□□ 1.2
TMEM88-202ENST00000574668 NBPF4Q96M43 638 aa22.54■■□□□ 1.2
TMEM88-202ENST00000574668 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
TMEM88-202ENST00000574668 TUBGCP6Q96RT7 1819 aa22.52■■□□□ 1.2
TMEM88-202ENST00000574668 RTL1A6NKG5 1358 aa22.51■■□□□ 1.19
TMEM88-202ENST00000574668 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
TMEM88-202ENST00000574668 SLC16A10Q8TF71 515 aa22.51■■□□□ 1.19
TMEM88-202ENST00000574668 EMILIN1Q9Y6C2 1016 aa22.51■■□□□ 1.19
TMEM88-202ENST00000574668 POLD1P28340 1107 aa22.5■■□□□ 1.19
TMEM88-202ENST00000574668 GPR162Q16538 588 aa22.5■■□□□ 1.19
TMEM88-202ENST00000574668 CCNL1Q9UK58 526 aaPredicted RBP22.5■■□□□ 1.19
TMEM88-202ENST00000574668 LY75O60449 1722 aa22.5■■□□□ 1.19
TMEM88-202ENST00000574668 POLKQ9UBT6 870 aa22.49■■□□□ 1.19
TMEM88-202ENST00000574668 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
TMEM88-202ENST00000574668 HSP90AB2PQ58FF8 381 aa22.47■■□□□ 1.19
TMEM88-202ENST00000574668 PELP1Q8IZL8 1130 aaKnown RBP22.47■■□□□ 1.19
TMEM88-202ENST00000574668 COL24A1Q17RW2 1714 aa22.47■■□□□ 1.19
TMEM88-202ENST00000574668 FLT4P35916 1363 aa22.47■■□□□ 1.19
TMEM88-202ENST00000574668 KIF24Q5T7B8 1368 aa22.47■■□□□ 1.19
TMEM88-202ENST00000574668 RAPGEF4Q8WZA2 1011 aa22.46■■□□□ 1.19
TMEM88-202ENST00000574668 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
TMEM88-202ENST00000574668 MSH5O43196 834 aa22.45■■□□□ 1.18
TMEM88-202ENST00000574668 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
TMEM88-202ENST00000574668 CHD4Q14839 1912 aa22.45■■□□□ 1.18
TMEM88-202ENST00000574668 TATP17735 454 aaPredicted RBP22.44■■□□□ 1.18
TMEM88-202ENST00000574668 RALBP1Q15311 655 aa22.44■■□□□ 1.18
TMEM88-202ENST00000574668 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
TMEM88-202ENST00000574668 INSRP06213 1382 aa22.42■■□□□ 1.18
TMEM88-202ENST00000574668 MTHFSP49914 203 aa22.42■■□□□ 1.18
TMEM88-202ENST00000574668 MSL1Q68DK7 614 aa22.42■■□□□ 1.18
TMEM88-202ENST00000574668 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
TMEM88-202ENST00000574668 PCDH11XQ9BZA7 1347 aa22.4■■□□□ 1.18
TMEM88-202ENST00000574668 PCDH11YQ9BZA8 1340 aa22.4■■□□□ 1.18
TMEM88-202ENST00000574668 PPP2R1AP30153 589 aa22.4■■□□□ 1.18
TMEM88-202ENST00000574668 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.17
TMEM88-202ENST00000574668 CYP27B1O15528 508 aa22.38■■□□□ 1.17
TMEM88-202ENST00000574668 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
TMEM88-202ENST00000574668 C5P01031 1676 aa22.37■■□□□ 1.17
TMEM88-202ENST00000574668 YBX3P16989 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
TMEM88-202ENST00000574668 C1QTNF8P60827 252 aa22.37■■□□□ 1.17
TMEM88-202ENST00000574668 CFAP53Q96M91 514 aa22.37■■□□□ 1.17
TMEM88-202ENST00000574668 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
TMEM88-202ENST00000574668 ANP32CO43423 234 aa22.36■■□□□ 1.17
TMEM88-202ENST00000574668 TOGARAM1Q9Y4F4 1720 aa22.35■■□□□ 1.17
TMEM88-202ENST00000574668 PRKRIP1Q9H875 184 aaPredicted RBP22.35■■□□□ 1.17
TMEM88-202ENST00000574668 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
TMEM88-202ENST00000574668 MYBBP1AQ9BQG0 1328 aaKnown RBP22.33■■□□□ 1.17
TMEM88-202ENST00000574668 SMIM5Q71RC9 77 aa22.33■■□□□ 1.17
TMEM88-202ENST00000574668 AMIGO3Q86WK7 504 aa22.33■■□□□ 1.17
TMEM88-202ENST00000574668 DIAPH1O60610 1272 aaKnown RBP22.31■■□□□ 1.16
TMEM88-202ENST00000574668 PIGBQ92521 554 aa22.31■■□□□ 1.16
TMEM88-202ENST00000574668 TAF1LQ8IZX4 1826 aa22.3■■□□□ 1.16
TMEM88-202ENST00000574668 PKD1L3Q7Z443 1732 aa22.3■■□□□ 1.16
TMEM88-202ENST00000574668 C4BP0C0L5 1744 aa22.29■■□□□ 1.16
TMEM88-202ENST00000574668 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
TMEM88-202ENST00000574668 NCAPD2Q15021 1401 aa22.29■■□□□ 1.16
TMEM88-202ENST00000574668 ITGB4P16144 1822 aa22.29■■□□□ 1.16
TMEM88-202ENST00000574668 GRIN3BO60391 1043 aa22.28■■□□□ 1.16
TMEM88-202ENST00000574668 PHF14O94880 888 aa22.28■■□□□ 1.16
TMEM88-202ENST00000574668 IL13P35225 146 aa22.28■■□□□ 1.16
TMEM88-202ENST00000574668 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 270.4 ms