RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 WWC1Q8IX03 1113 aa27.81■■■□□ 2.04
CXCL16-203ENST00000574412 IL2RBP14784 551 aa27.81■■■□□ 2.04
CXCL16-203ENST00000574412 PLEKHO1Q53GL0 409 aaPredicted RBP27.81■■■□□ 2.04
CXCL16-203ENST00000574412 GAS2L2Q8NHY3 880 aa27.81■■■□□ 2.04
CXCL16-203ENST00000574412 SPATA31A1Q5TZJ5 1347 aa27.8■■■□□ 2.04
CXCL16-203ENST00000574412 PKD1L3Q7Z443 1732 aa27.8■■■□□ 2.04
CXCL16-203ENST00000574412 SPATA31A5Q5VU36 1347 aa27.8■■■□□ 2.04
CXCL16-203ENST00000574412 SPATA31A7Q8IWB4 1347 aa27.8■■■□□ 2.04
CXCL16-203ENST00000574412 DCTN1Q14203 1278 aa27.79■■■□□ 2.04
CXCL16-203ENST00000574412 ZNF530Q6P9A1 599 aaPredicted RBP27.79■■■□□ 2.04
CXCL16-203ENST00000574412 THUMPD2Q9BTF0 503 aaKnown RBP27.79■■■□□ 2.04
CXCL16-203ENST00000574412 ZNF521Q96K83 1311 aa27.79■■■□□ 2.04
CXCL16-203ENST00000574412 OVOS2A0A0G2JMS6 1433 aa27.79■■■□□ 2.04
CXCL16-203ENST00000574412 AMOTQ4VCS5 1084 aa27.78■■■□□ 2.04
CXCL16-203ENST00000574412 NGEFQ8N5V2 710 aa27.78■■■□□ 2.04
CXCL16-203ENST00000574412 VPS72Q15906 364 aa27.77■■■□□ 2.04
CXCL16-203ENST00000574412 CCDC27Q2M243 656 aa27.77■■■□□ 2.04
CXCL16-203ENST00000574412 CDCA7LQ96GN5 454 aa27.77■■■□□ 2.04
CXCL16-203ENST00000574412 PHF23Q9BUL5 403 aaPredicted RBP27.77■■■□□ 2.04
CXCL16-203ENST00000574412 VIRMAQ69YN4 1812 aaKnown RBP27.76■■■□□ 2.03
CXCL16-203ENST00000574412 SHANK3Q9BYB0 1731 aa27.75■■■□□ 2.03
CXCL16-203ENST00000574412 MCM10Q7L590 875 aa27.75■■■□□ 2.03
CXCL16-203ENST00000574412 MAP3K5Q99683 1374 aa27.75■■■□□ 2.03
CXCL16-203ENST00000574412 SPG7Q9UQ90 795 aa27.75■■■□□ 2.03
CXCL16-203ENST00000574412 DISP2A7MBM2 1401 aa27.74■■■□□ 2.03
CXCL16-203ENST00000574412 PDE3BQ13370 1112 aa27.74■■■□□ 2.03
CXCL16-203ENST00000574412 GNAT3A8MTJ3 354 aa27.73■■■□□ 2.03
CXCL16-203ENST00000574412 GOLGA2Q08379 1002 aa27.72■■■□□ 2.03
CXCL16-203ENST00000574412 LMOD3Q0VAK6 560 aa27.72■■■□□ 2.03
CXCL16-203ENST00000574412 C1orf141Q5JVX7 400 aa27.72■■■□□ 2.03
CXCL16-203ENST00000574412 ZCRB1Q8TBF4 217 aaKnown RBP27.72■■■□□ 2.03
CXCL16-203ENST00000574412 SPINK5Q9NQ38 1064 aaPredicted RBP27.72■■■□□ 2.03
CXCL16-203ENST00000574412 NCBP3Q53F19 620 aaKnown RBP27.72■■■□□ 2.03
CXCL16-203ENST00000574412 RTF1Q92541 710 aaKnown RBP27.72■■■□□ 2.03
CXCL16-203ENST00000574412 FAM98CQ17RN3 349 aaKnown RBP27.71■■■□□ 2.03
CXCL16-203ENST00000574412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.71■■■□□ 2.03
CXCL16-203ENST00000574412 THRAP3Q9Y2W1 955 aaKnown RBP27.71■■■□□ 2.03
CXCL16-203ENST00000574412 GTF3C3Q9Y5Q9 886 aa27.71■■■□□ 2.03
CXCL16-203ENST00000574412 AKAP4Q5JQC9 854 aa27.7■■■□□ 2.02
CXCL16-203ENST00000574412 CYP27B1O15528 508 aa27.69■■■□□ 2.02
CXCL16-203ENST00000574412 MPRIPQ6WCQ1 1025 aa27.69■■■□□ 2.02
CXCL16-203ENST00000574412 GLI3P10071 1580 aa27.69■■■□□ 2.02
CXCL16-203ENST00000574412 ATRNO75882 1429 aa27.69■■■□□ 2.02
CXCL16-203ENST00000574412 DDX54Q8TDD1 881 aaKnown RBP27.68■■■□□ 2.02
CXCL16-203ENST00000574412 PHKG2P15735 406 aa27.68■■■□□ 2.02
CXCL16-203ENST00000574412 WDR63Q8IWG1 891 aa27.68■■■□□ 2.02
CXCL16-203ENST00000574412 TRPC5Q9UL62 973 aaPredicted RBP27.68■■■□□ 2.02
CXCL16-203ENST00000574412 LRRC37A3O60309 1634 aa27.67■■■□□ 2.02
CXCL16-203ENST00000574412 IL17REQ8NFR9 667 aa27.67■■■□□ 2.02
CXCL16-203ENST00000574412 LAS1LQ9Y4W2 734 aaKnown RBP27.67■■■□□ 2.02
CXCL16-203ENST00000574412 PLEKHG2Q9H7P9 1386 aa27.67■■■□□ 2.02
CXCL16-203ENST00000574412 BARGINQ6ZT62 677 aa27.66■■■□□ 2.02
CXCL16-203ENST00000574412 IFNL2Q8IZJ0 200 aa27.66■■■□□ 2.02
CXCL16-203ENST00000574412 GJD4Q96KN9 370 aaPredicted RBP27.66■■■□□ 2.02
CXCL16-203ENST00000574412 QTRT2Q9H974 415 aaKnown RBP27.66■■■□□ 2.02
CXCL16-203ENST00000574412 LGR6Q9HBX8 967 aa27.66■■■□□ 2.02
CXCL16-203ENST00000574412 PCDH11XQ9BZA7 1347 aa27.66■■■□□ 2.02
CXCL16-203ENST00000574412 PCDH11YQ9BZA8 1340 aa27.66■■■□□ 2.02
CXCL16-203ENST00000574412 A0A0G2JS52 829 aa27.65■■■□□ 2.02
CXCL16-203ENST00000574412 MYT1Q01538 1121 aa27.65■■■□□ 2.02
CXCL16-203ENST00000574412 SLFN5Q08AF3 891 aa27.65■■■□□ 2.02
CXCL16-203ENST00000574412 SCN11AQ9UI33 1791 aa27.64■■■□□ 2.02
CXCL16-203ENST00000574412 HTATSF1O43719 755 aaKnown RBP27.64■■■□□ 2.02
CXCL16-203ENST00000574412 TNS2Q63HR2 1409 aa27.63■■■□□ 2.01
CXCL16-203ENST00000574412 EXOC5O00471 708 aa27.62■■■□□ 2.01
CXCL16-203ENST00000574412 CDCA7Q9BWT1 371 aaPredicted RBP27.62■■■□□ 2.01
CXCL16-203ENST00000574412 E9PSI1 815 aa27.62■■■□□ 2.01
CXCL16-203ENST00000574412 DDB1Q16531 1140 aa27.62■■■□□ 2.01
CXCL16-203ENST00000574412 ILDR1Q86SU0 546 aaPredicted RBP27.62■■■□□ 2.01
CXCL16-203ENST00000574412 TSR2Q969E8 191 aaKnown RBP27.62■■■□□ 2.01
CXCL16-203ENST00000574412 KDM6AO15550 1401 aaPredicted RBP27.61■■■□□ 2.01
CXCL16-203ENST00000574412 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
CXCL16-203ENST00000574412 CALD1Q05682 793 aaKnown RBP27.6■■■□□ 2.01
CXCL16-203ENST00000574412 ADAMTS7Q9UKP4 1686 aa27.6■■■□□ 2.01
CXCL16-203ENST00000574412 DUSP27Q5VZP5 1158 aa27.59■■■□□ 2.01
CXCL16-203ENST00000574412 IL16Q14005 1332 aa27.59■■■□□ 2.01
CXCL16-203ENST00000574412 THSD7AQ9UPZ6 1657 aa27.59■■■□□ 2.01
CXCL16-203ENST00000574412 ZNF772Q68DY9 489 aaPredicted RBP27.59■■■□□ 2.01
CXCL16-203ENST00000574412 CEMIPQ8WUJ3 1361 aa27.58■■■□□ 2.01
CXCL16-203ENST00000574412 KAT6BQ8WYB5 2073 aa27.58■■■□□ 2.01
CXCL16-203ENST00000574412 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
CXCL16-203ENST00000574412 SUPT16HQ9Y5B9 1047 aaKnown RBP27.57■■■□□ 2
CXCL16-203ENST00000574412 TRMT2AQ8IZ69 625 aaKnown RBP27.56■■■□□ 2
CXCL16-203ENST00000574412 FANCIQ9NVI1 1328 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 IFT57Q9NWB7 429 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 TOGARAM1Q9Y4F4 1720 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 TEFQ10587 303 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 DCAF5Q96JK2 942 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 MYH16Q9H6N6 1097 aa27.56■■■□□ 2
CXCL16-203ENST00000574412 SIPA1L3O60292 1781 aaPredicted RBP27.55■■■□□ 2
CXCL16-203ENST00000574412 HSP90AB1P08238 724 aaKnown RBP27.55■■■□□ 2
CXCL16-203ENST00000574412 GNAI1P63096 354 aa27.55■■■□□ 2
CXCL16-203ENST00000574412 CFAP44Q96MT7 982 aa27.54■■■□□ 2
CXCL16-203ENST00000574412 MBIPQ9NS73 344 aa27.54■■■□□ 2
CXCL16-203ENST00000574412 ZNF853P0CG23 659 aa27.53■■■□□ 2
CXCL16-203ENST00000574412 RGS17Q9UGC6 210 aaPredicted RBP27.52■■■□□ 2
CXCL16-203ENST00000574412 NKX1-1Q15270 411 aaPredicted RBP27.52■■■□□ 2
CXCL16-203ENST00000574412 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
CXCL16-203ENST00000574412 TAF7Q15545 349 aaPredicted RBP27.51■■□□□ 1.99
CXCL16-203ENST00000574412 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms