RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
LITAF-209ENST00000571688 ZNF853P0CG23 659 aa20.48■□□□□ 0.87
LITAF-209ENST00000571688 NFE2L2Q16236 605 aa20.48■□□□□ 0.87
LITAF-209ENST00000571688 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
LITAF-209ENST00000571688 CFAP65Q6ZU64 1925 aaKnown RBP20.47■□□□□ 0.87
LITAF-209ENST00000571688 TSC1Q92574 1164 aa20.47■□□□□ 0.87
LITAF-209ENST00000571688 GTPBP4Q9BZE4 634 aaKnown RBP20.47■□□□□ 0.87
LITAF-209ENST00000571688 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
LITAF-209ENST00000571688 CUL4AQ13619 759 aa20.47■□□□□ 0.87
LITAF-209ENST00000571688 FAM184AQ8NB25 1140 aa20.47■□□□□ 0.87
LITAF-209ENST00000571688 THUMPD2Q9BTF0 503 aaKnown RBP20.47■□□□□ 0.87
LITAF-209ENST00000571688 MBIPQ9NS73 344 aa20.47■□□□□ 0.87
LITAF-209ENST00000571688 ERC2O15083 957 aa20.46■□□□□ 0.87
LITAF-209ENST00000571688 PHF14O94880 888 aa20.46■□□□□ 0.87
LITAF-209ENST00000571688 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
LITAF-209ENST00000571688 NPATQ14207 1427 aa20.46■□□□□ 0.87
LITAF-209ENST00000571688 ELL2O00472 640 aaPredicted RBP20.46■□□□□ 0.87
LITAF-209ENST00000571688 MCM2P49736 904 aa20.45■□□□□ 0.86
LITAF-209ENST00000571688 SPTLC3Q9NUV7 552 aa20.45■□□□□ 0.86
LITAF-209ENST00000571688 KIDINS220Q9ULH0 1771 aa20.45■□□□□ 0.86
LITAF-209ENST00000571688 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
LITAF-209ENST00000571688 FKBP5Q13451 457 aaPredicted RBP20.44■□□□□ 0.86
LITAF-209ENST00000571688 PHACTR3Q96KR7 559 aa20.44■□□□□ 0.86
LITAF-209ENST00000571688 ZNF830Q96NB3 372 aaPredicted RBP20.44■□□□□ 0.86
LITAF-209ENST00000571688 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
LITAF-209ENST00000571688 CLTCQ00610 1675 aaKnown RBP20.44■□□□□ 0.86
LITAF-209ENST00000571688 ASXL2Q76L83 1435 aa20.43■□□□□ 0.86
LITAF-209ENST00000571688 NEK4P51957 841 aa20.43■□□□□ 0.86
LITAF-209ENST00000571688 CBX1P83916 185 aa20.43■□□□□ 0.86
LITAF-209ENST00000571688 RPAP2Q8IXW5 612 aaPredicted RBP20.43■□□□□ 0.86
LITAF-209ENST00000571688 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
LITAF-209ENST00000571688 INTS4Q96HW7 963 aaKnown RBP20.43■□□□□ 0.86
LITAF-209ENST00000571688 ZBTB7CA1YPR0 619 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 KIF20AO95235 890 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 SRPK2P78362 688 aaKnown RBP20.42■□□□□ 0.86
LITAF-209ENST00000571688 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 ARHGEF40Q8TER5 1519 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 PPP4R3BQ5MIZ7 849 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 CEP85Q6P2H3 762 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 C8orf58Q8NAV2 365 aa20.42■□□□□ 0.86
LITAF-209ENST00000571688 SMARCA5O60264 1052 aaPredicted RBP20.41■□□□□ 0.86
LITAF-209ENST00000571688 USP25Q9UHP3 1055 aa20.41■□□□□ 0.86
LITAF-209ENST00000571688 NEXMIFQ5QGS0 1516 aa20.41■□□□□ 0.86
LITAF-209ENST00000571688 DLG5Q8TDM6 1919 aa20.41■□□□□ 0.86
LITAF-209ENST00000571688 PIK3C2BO00750 1634 aa20.41■□□□□ 0.86
LITAF-209ENST00000571688 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.86
LITAF-209ENST00000571688 TTC12Q9H892 705 aaPredicted RBP20.41■□□□□ 0.86
LITAF-209ENST00000571688 A0A0U1RQG5 324 aaPredicted RBP20.4■□□□□ 0.86
LITAF-209ENST00000571688 GADD45BO75293 160 aaPredicted RBP20.4■□□□□ 0.86
LITAF-209ENST00000571688 BCL2L12Q9HB09 334 aa20.4■□□□□ 0.86
LITAF-209ENST00000571688 ABCC3O15438 1527 aa20.4■□□□□ 0.86
LITAF-209ENST00000571688 MPNDQ8N594 471 aa20.4■□□□□ 0.86
LITAF-209ENST00000571688 ADCY5O95622 1261 aa20.4■□□□□ 0.86
LITAF-209ENST00000571688 RGS12O14924 1447 aa20.39■□□□□ 0.85
LITAF-209ENST00000571688 LETM1O95202 739 aaPredicted RBP20.39■□□□□ 0.85
LITAF-209ENST00000571688 C17orf53Q8N3J3 647 aaPredicted RBP20.39■□□□□ 0.85
LITAF-209ENST00000571688 TCHHQ07283 1943 aa20.39■□□□□ 0.85
LITAF-209ENST00000571688 TUBGCP6Q96RT7 1819 aa20.38■□□□□ 0.85
LITAF-209ENST00000571688 OSBPL3Q9H4L5 887 aa20.38■□□□□ 0.85
LITAF-209ENST00000571688 RTL1A6NKG5 1358 aa20.38■□□□□ 0.85
LITAF-209ENST00000571688 USP48Q86UV5 1035 aa20.38■□□□□ 0.85
LITAF-209ENST00000571688 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
LITAF-209ENST00000571688 HMOX1P09601 288 aa20.37■□□□□ 0.85
LITAF-209ENST00000571688 TMEM87AQ8NBN3 555 aa20.37■□□□□ 0.85
LITAF-209ENST00000571688 GDPD2Q9HCC8 539 aa20.37■□□□□ 0.85
LITAF-209ENST00000571688 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
LITAF-209ENST00000571688 CCDC183Q5T5S1 534 aa20.36■□□□□ 0.85
LITAF-209ENST00000571688 POLKQ9UBT6 870 aa20.36■□□□□ 0.85
LITAF-209ENST00000571688 MAP2P11137 1827 aaKnown RBP20.36■□□□□ 0.85
LITAF-209ENST00000571688 HECW2Q9P2P5 1572 aa20.36■□□□□ 0.85
LITAF-209ENST00000571688 PTPRMP28827 1452 aa20.35■□□□□ 0.85
LITAF-209ENST00000571688 PDCL2Q8N4E4 241 aa20.35■□□□□ 0.85
LITAF-209ENST00000571688 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
LITAF-209ENST00000571688 APBB1O00213 710 aa20.35■□□□□ 0.85
LITAF-209ENST00000571688 ANAPC15P60006 121 aa20.35■□□□□ 0.85
LITAF-209ENST00000571688 MSH6P52701 1360 aa20.34■□□□□ 0.85
LITAF-209ENST00000571688 CPSF1Q10570 1443 aaKnown RBP20.34■□□□□ 0.85
LITAF-209ENST00000571688 NUTM2DQ5VT03 806 aaPredicted RBP20.34■□□□□ 0.85
LITAF-209ENST00000571688 HDGFL2Q7Z4V5 671 aaPredicted RBP20.34■□□□□ 0.85
LITAF-209ENST00000571688 ANKRD7Q92527 254 aa20.34■□□□□ 0.85
LITAF-209ENST00000571688 IL17RAQ96F46 866 aa20.34■□□□□ 0.85
LITAF-209ENST00000571688 PALD1Q9ULE6 856 aa20.34■□□□□ 0.85
LITAF-209ENST00000571688 WDR33Q9C0J8 1336 aaKnown RBP20.34■□□□□ 0.85
LITAF-209ENST00000571688 PDE1AP54750 535 aa20.33■□□□□ 0.85
LITAF-209ENST00000571688 ESYT1Q9BSJ8 1104 aa20.33■□□□□ 0.85
LITAF-209ENST00000571688 KDM4AO75164 1064 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.84
LITAF-209ENST00000571688 MCCP23508 829 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 KIAA1524Q8TCG1 905 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 DIAPH3Q9NSV4 1193 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 SIGLEC1Q9BZZ2 1709 aa20.33■□□□□ 0.84
LITAF-209ENST00000571688 MX1P20591 662 aa20.32■□□□□ 0.84
LITAF-209ENST00000571688 RPAP1Q9BWH6 1393 aaPredicted RBP20.32■□□□□ 0.84
LITAF-209ENST00000571688 FOXD4L6Q3SYB3 417 aaPredicted RBP20.31■□□□□ 0.84
LITAF-209ENST00000571688 FOXD4L3Q6VB84 417 aaPredicted RBP20.31■□□□□ 0.84
LITAF-209ENST00000571688 YTHDC2Q9H6S0 1430 aaKnown RBP20.31■□□□□ 0.84
LITAF-209ENST00000571688 RIOK3O14730 519 aaKnown RBP20.3■□□□□ 0.84
LITAF-209ENST00000571688 CTIFO43310 598 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms