RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 WNK3Q9BYP7 1800 aa17.23■□□□□ 0.35
CTDNEP1-205ENST00000570828 EXOC5O00471 708 aa17.22■□□□□ 0.35
CTDNEP1-205ENST00000570828 MARCH10Q8NA82 808 aaPredicted RBP17.22■□□□□ 0.35
CTDNEP1-205ENST00000570828 LTN1O94822 1766 aa17.22■□□□□ 0.35
CTDNEP1-205ENST00000570828 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
CTDNEP1-205ENST00000570828 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
CTDNEP1-205ENST00000570828 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
CTDNEP1-205ENST00000570828 IP6K1Q92551 441 aa17.21■□□□□ 0.35
CTDNEP1-205ENST00000570828 BCL9O00512 1426 aa17.21■□□□□ 0.34
CTDNEP1-205ENST00000570828 MAP3K19Q56UN5 1328 aa17.2■□□□□ 0.34
CTDNEP1-205ENST00000570828 IL2RBP14784 551 aa17.19■□□□□ 0.34
CTDNEP1-205ENST00000570828 AMPHP49418 695 aa17.19■□□□□ 0.34
CTDNEP1-205ENST00000570828 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
CTDNEP1-205ENST00000570828 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
CTDNEP1-205ENST00000570828 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
CTDNEP1-205ENST00000570828 FYB1O15117 783 aa17.18■□□□□ 0.34
CTDNEP1-205ENST00000570828 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
CTDNEP1-205ENST00000570828 HOXC9P31274 260 aa17.17■□□□□ 0.34
CTDNEP1-205ENST00000570828 NBPF14Q5TI25 921 aa17.17■□□□□ 0.34
CTDNEP1-205ENST00000570828 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
CTDNEP1-205ENST00000570828 LRP5O75197 1615 aa17.16■□□□□ 0.34
CTDNEP1-205ENST00000570828 RREB1Q92766 1687 aa17.16■□□□□ 0.34
CTDNEP1-205ENST00000570828 PLSCR1O15162 318 aa17.15■□□□□ 0.34
CTDNEP1-205ENST00000570828 FBLN1P23142 703 aa17.15■□□□□ 0.34
CTDNEP1-205ENST00000570828 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
CTDNEP1-205ENST00000570828 EIF4G2P78344 907 aaKnown RBP eCLIP17.14■□□□□ 0.33
CTDNEP1-205ENST00000570828 PTF1AQ7RTS3 328 aa17.14■□□□□ 0.33
CTDNEP1-205ENST00000570828 MYOM1P52179 1685 aa17.13■□□□□ 0.33
CTDNEP1-205ENST00000570828 SMG6Q86US8 1419 aaKnown RBP17.13■□□□□ 0.33
CTDNEP1-205ENST00000570828 NUP188Q5SRE5 1749 aa17.13■□□□□ 0.33
CTDNEP1-205ENST00000570828 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
CTDNEP1-205ENST00000570828 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
CTDNEP1-205ENST00000570828 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
CTDNEP1-205ENST00000570828 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
CTDNEP1-205ENST00000570828 RGPD3A6NKT7 1758 aaPredicted RBP17.12■□□□□ 0.33
CTDNEP1-205ENST00000570828 RGPD4Q7Z3J3 1758 aa17.12■□□□□ 0.33
CTDNEP1-205ENST00000570828 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 HSPA5P11021 654 aaKnown RBP17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 ACSBG1Q96GR2 724 aa17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 FLT4P35916 1363 aa17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
CTDNEP1-205ENST00000570828 KCNQ2O43526 872 aa17.09■□□□□ 0.33
CTDNEP1-205ENST00000570828 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
CTDNEP1-205ENST00000570828 INSRP06213 1382 aa17.08■□□□□ 0.32
CTDNEP1-205ENST00000570828 DDX54Q8TDD1 881 aaKnown RBP17.08■□□□□ 0.32
CTDNEP1-205ENST00000570828 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
CTDNEP1-205ENST00000570828 MEGF6O75095 1541 aa17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 TXNRD1Q16881 649 aa17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 NBPF6Q5VWK0 638 aa17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 NBPF4Q96M43 638 aa17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 ANO8Q9HCE9 1232 aaPredicted RBP17.06■□□□□ 0.32
CTDNEP1-205ENST00000570828 PROM2Q8N271 834 aa17.05■□□□□ 0.32
CTDNEP1-205ENST00000570828 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
CTDNEP1-205ENST00000570828 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
CTDNEP1-205ENST00000570828 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
CTDNEP1-205ENST00000570828 PPM1GO15355 546 aaPredicted RBP17.04■□□□□ 0.32
CTDNEP1-205ENST00000570828 ZCRB1Q8TBF4 217 aaKnown RBP17.04■□□□□ 0.32
CTDNEP1-205ENST00000570828 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
CTDNEP1-205ENST00000570828 TATP17735 454 aaPredicted RBP17.01■□□□□ 0.31
CTDNEP1-205ENST00000570828 SYTL4Q96C24 671 aaPredicted RBP17.01■□□□□ 0.31
CTDNEP1-205ENST00000570828 SPON1Q9HCB6 807 aa17.01■□□□□ 0.31
CTDNEP1-205ENST00000570828 PANK3Q9H999 370 aa17■□□□□ 0.31
CTDNEP1-205ENST00000570828 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
CTDNEP1-205ENST00000570828 PPP1R1BQ9UD71 204 aaPredicted RBP16.99■□□□□ 0.31
CTDNEP1-205ENST00000570828 WASHC2AQ641Q2 1341 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 PCDH11XQ9BZA7 1347 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 RGPD2P0DJD1 1756 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 PRIM1P49642 420 aaKnown RBP16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 NSD2O96028 1365 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 BTAF1O14981 1849 aa16.98■□□□□ 0.31
CTDNEP1-205ENST00000570828 CREBZFQ9NS37 354 aa16.97■□□□□ 0.31
CTDNEP1-205ENST00000570828 POLKQ9UBT6 870 aa16.97■□□□□ 0.31
CTDNEP1-205ENST00000570828 ANKRD26Q9UPS8 1709 aa16.96■□□□□ 0.31
CTDNEP1-205ENST00000570828 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
CTDNEP1-205ENST00000570828 PDGFDQ9GZP0 370 aaPredicted RBP16.95■□□□□ 0.3
CTDNEP1-205ENST00000570828 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
CTDNEP1-205ENST00000570828 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
CTDNEP1-205ENST00000570828 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
CTDNEP1-205ENST00000570828 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
CTDNEP1-205ENST00000570828 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
CTDNEP1-205ENST00000570828 PAPPAQ13219 1627 aa16.94■□□□□ 0.3
CTDNEP1-205ENST00000570828 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
CTDNEP1-205ENST00000570828 KNSTRNQ9Y448 316 aa16.93■□□□□ 0.3
CTDNEP1-205ENST00000570828 EYA1Q99502 592 aa16.92■□□□□ 0.3
CTDNEP1-205ENST00000570828 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
CTDNEP1-205ENST00000570828 KIF7Q2M1P5 1343 aa16.92■□□□□ 0.3
CTDNEP1-205ENST00000570828 CYP27B1O15528 508 aa16.91■□□□□ 0.3
CTDNEP1-205ENST00000570828 EIF4A2Q14240 407 aaKnown RBP16.91■□□□□ 0.3
CTDNEP1-205ENST00000570828 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
CTDNEP1-205ENST00000570828 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
CTDNEP1-205ENST00000570828 MTFR1LQ9H019 292 aa16.9■□□□□ 0.3
CTDNEP1-205ENST00000570828 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
CTDNEP1-205ENST00000570828 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
CTDNEP1-205ENST00000570828 KCNQ4P56696 695 aa16.88■□□□□ 0.29
CTDNEP1-205ENST00000570828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms