RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 KIF24Q5T7B8 1368 aa13.33□□□□□ -0.27
GTF3C1-212ENST00000570129 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
GTF3C1-212ENST00000570129 OVOS2A0A0G2JMS6 1433 aa13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 SMG6Q86US8 1419 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 SF3B2Q13435 895 aaKnown RBP13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 SULT6B1Q6IMI4 303 aa13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
GTF3C1-212ENST00000570129 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
GTF3C1-212ENST00000570129 PSDA5PKW4 1024 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-212ENST00000570129 BCL11BQ9C0K0 894 aaPredicted RBP13.32□□□□□ -0.28
GTF3C1-212ENST00000570129 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
GTF3C1-212ENST00000570129 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
GTF3C1-212ENST00000570129 BAG6P46379 1132 aa13.31□□□□□ -0.28
GTF3C1-212ENST00000570129 SYTL4Q96C24 671 aaPredicted RBP13.3□□□□□ -0.28
GTF3C1-212ENST00000570129 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
GTF3C1-212ENST00000570129 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-212ENST00000570129 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-212ENST00000570129 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
GTF3C1-212ENST00000570129 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
GTF3C1-212ENST00000570129 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
GTF3C1-212ENST00000570129 PHKG2P15735 406 aa13.27□□□□□ -0.29
GTF3C1-212ENST00000570129 R3HDM1Q15032 1099 aaKnown RBP13.27□□□□□ -0.29
GTF3C1-212ENST00000570129 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
GTF3C1-212ENST00000570129 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
GTF3C1-212ENST00000570129 ZNF316A6NFI3 1004 aaPredicted RBP13.26□□□□□ -0.29
GTF3C1-212ENST00000570129 BCL9O00512 1426 aa13.26□□□□□ -0.29
GTF3C1-212ENST00000570129 SMIM5Q71RC9 77 aa13.26□□□□□ -0.29
GTF3C1-212ENST00000570129 PHACTR3Q96KR7 559 aa13.26□□□□□ -0.29
GTF3C1-212ENST00000570129 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 PARD3Q8TEW0 1356 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 TXNRD1Q16881 649 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 MPRIPQ6WCQ1 1025 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 PIGBQ92521 554 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
GTF3C1-212ENST00000570129 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
GTF3C1-212ENST00000570129 PLSCR1O15162 318 aa13.24□□□□□ -0.29
GTF3C1-212ENST00000570129 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
GTF3C1-212ENST00000570129 MTHFSDQ2M296 383 aaKnown RBP13.24□□□□□ -0.29
GTF3C1-212ENST00000570129 CCDC184Q52MB2 194 aa13.24□□□□□ -0.29
GTF3C1-212ENST00000570129 PCDH11XQ9BZA7 1347 aa13.23□□□□□ -0.29
GTF3C1-212ENST00000570129 PCDH11YQ9BZA8 1340 aa13.23□□□□□ -0.29
GTF3C1-212ENST00000570129 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
GTF3C1-212ENST00000570129 ASAP1Q9ULH1 1129 aa13.23□□□□□ -0.29
GTF3C1-212ENST00000570129 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
GTF3C1-212ENST00000570129 RGPD1P0DJD0 1748 aa13.22□□□□□ -0.29
GTF3C1-212ENST00000570129 KDRP35968 1356 aa13.22□□□□□ -0.29
GTF3C1-212ENST00000570129 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
GTF3C1-212ENST00000570129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.294e-12■■■■□ 21.5
GTF3C1-212ENST00000570129 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-212ENST00000570129 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF3C1-212ENST00000570129 ZNF827Q17R98 1081 aa13.21□□□□□ -0.29
GTF3C1-212ENST00000570129 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
GTF3C1-212ENST00000570129 KDM6AO15550 1401 aaPredicted RBP13.21□□□□□ -0.3
GTF3C1-212ENST00000570129 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
GTF3C1-212ENST00000570129 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 AMIGO3Q86WK7 504 aa13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 PRKRIP1Q9H875 184 aaPredicted RBP13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
GTF3C1-212ENST00000570129 NHSQ6T4R5 1651 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 NFATC2IPQ8NCF5 419 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 IL17REQ8NFR9 667 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 CFAP53Q96M91 514 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 PKD1L3Q7Z443 1732 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 DOT1LQ8TEK3 1739 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 BTAF1O14981 1849 aa13.18□□□□□ -0.3
GTF3C1-212ENST00000570129 RALBP1Q15311 655 aa13.17□□□□□ -0.3
GTF3C1-212ENST00000570129 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
GTF3C1-212ENST00000570129 RNMTO43148 476 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-212ENST00000570129 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
GTF3C1-212ENST00000570129 ITPK1Q13572 414 aa13.16□□□□□ -0.3
GTF3C1-212ENST00000570129 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
GTF3C1-212ENST00000570129 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
GTF3C1-212ENST00000570129 CABP4P57796 275 aa13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 DCAF5Q96JK2 942 aa13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 NUP188Q5SRE5 1749 aa13.15□□□□□ -0.3
GTF3C1-212ENST00000570129 KCNQ3O43525 872 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 SLC15A2Q16348 729 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 PLEKHF1Q96S99 279 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 RREB1Q92766 1687 aa13.14□□□□□ -0.31
GTF3C1-212ENST00000570129 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 PTCD1O75127 700 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 NBPF14Q5TI25 921 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 MCM10Q7L590 875 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
GTF3C1-212ENST00000570129 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms