RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 UPP2O95045 317 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 SKIP12755 728 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 PTGIRP43119 386 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 CTSOP43234 321 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 TBC1D9Q6ZT07 1266 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 KIFC2Q96AC6 838 aa6.86□□□□□ -1.31
HMGB1P6-201ENST00000569046 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P6-201ENST00000569046 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
HMGB1P6-201ENST00000569046 STAU1O95793 577 aaKnown RBP6.85□□□□□ -1.31
HMGB1P6-201ENST00000569046 INSM2Q96T92 566 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P6-201ENST00000569046 DNMT3LQ9UJW3 386 aa6.85□□□□□ -1.31
HMGB1P6-201ENST00000569046 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
HMGB1P6-201ENST00000569046 DEPDC4Q8N2C3 294 aa6.84□□□□□ -1.31
HMGB1P6-201ENST00000569046 A0A1W2PRU2 124 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 FIGNL2A6NMB9 653 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 NCOA4Q13772 614 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 FOXD4L5Q5VV16 416 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 CALR3Q96L12 384 aaKnown RBP6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 ARHGEF10LQ9HCE6 1279 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 RAB6BQ9NRW1 208 aa6.83□□□□□ -1.32
HMGB1P6-201ENST00000569046 TTLL8A6PVC2 850 aa6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP17L5A8MUK1 530 aa6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP4Q13107 963 aa6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 CYP2U1Q7Z449 544 aa6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 POLMQ9NP87 494 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP17L3A6NCW0 530 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP17L4A6NCW7 530 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 ATP9BO43861 1147 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 MAN1A2O60476 641 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP17L2Q6R6M4 530 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 USP17L1Q7RTZ2 530 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 C14orf37Q86TY3 774 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 ZNF775Q96BV0 537 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 TFIP11Q9UBB9 837 aaKnown RBP6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 PCDHGA11Q9Y5H2 935 aa6.81□□□□□ -1.32
HMGB1P6-201ENST00000569046 PALM3A6NDB9 673 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 MEN1O00255 615 aa6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 GNRH1P01148 92 aa6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 IL2RAP01589 272 aa6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 CLN3Q13286 438 aa6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 TRIM52Q96A61 297 aa6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 ESF1Q9H501 851 aaKnown RBP6.8□□□□□ -1.32
HMGB1P6-201ENST00000569046 SCNN1DP51172 638 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 EML3Q32P44 896 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 PLEKHM2Q8IWE5 1019 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 PPP1R12CQ9BZL4 782 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 ETNK1Q9HBU6 452 aa6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 MAFBQ9Y5Q3 323 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P6-201ENST00000569046 ARID3CA6NKF2 412 aa6.78□□□□□ -1.32
HMGB1P6-201ENST00000569046 RNF144AP50876 292 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P6-201ENST00000569046 CNKSR1Q969H4 720 aa6.78□□□□□ -1.32
HMGB1P6-201ENST00000569046 NOD1Q9Y239 953 aa6.78□□□□□ -1.32
HMGB1P6-201ENST00000569046 HRH3Q9Y5N1 445 aa6.78□□□□□ -1.32
HMGB1P6-201ENST00000569046 TMEM229AB2RXF0 380 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 LZTS3O60299 673 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 PRICKLE2Q7Z3G6 844 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 XAGE2Q96GT9 111 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 ESYT1Q9BSJ8 1104 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 GRIP2Q9C0E4 1043 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 KIAA1024Q9UPX6 916 aa6.77□□□□□ -1.33
HMGB1P6-201ENST00000569046 ZBTB7BO15156 539 aaPredicted RBP6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 VEGFBP49765 207 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 GDF10P55107 478 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 GTF2IP78347 998 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 CLDN10P78369 228 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 CENPCQ03188 943 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 CFAP70Q5T0N1 1121 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 NLRP3Q96P20 1036 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 MKRN1Q9UHC7 482 aaKnown RBP6.76□□□□□ -1.33
HMGB1P6-201ENST00000569046 TERTO14746 1132 aaKnown RBP6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 INHAP05111 366 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 RHOQP17081 205 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 GPC1P35052 558 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 PTSQ03393 145 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 NFX1Q12986 1120 aaKnown RBP6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 LYSMD3Q7Z3D4 306 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 FHDC1Q9C0D6 1143 aaPredicted RBP6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 NXF1Q9UBU9 619 aaKnown RBP6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
HMGB1P6-201ENST00000569046 SENP3-EIF4A1A0A087X0R7 540 aa6.74□□□□□ -1.33
HMGB1P6-201ENST00000569046 SLC27A3Q5K4L6 730 aa6.74□□□□□ -1.33
HMGB1P6-201ENST00000569046 KANK4Q5T7N3 995 aaPredicted RBP6.74□□□□□ -1.33
HMGB1P6-201ENST00000569046 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB1P6-201ENST00000569046 SLC35F4A4IF30 521 aa6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 WASLO00401 505 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 DKK1O94907 266 aa6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 POU4F2Q12837 409 aa6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 ESCO1Q5FWF5 840 aa6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 OGFOD1Q8N543 542 aa6.73□□□□□ -1.33
HMGB1P6-201ENST00000569046 SERTAD1Q9UHV2 236 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms