RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 MEGF6O75095 1541 aa24.9■■□□□ 1.58
SIN3A-212ENST00000568919 RGPD3A6NKT7 1758 aaPredicted RBP24.88■■□□□ 1.57
SIN3A-212ENST00000568919 RGPD4Q7Z3J3 1758 aa24.88■■□□□ 1.57
SIN3A-212ENST00000568919 TATP17735 454 aaPredicted RBP24.88■■□□□ 1.57
SIN3A-212ENST00000568919 ANKRD26Q9UPS8 1709 aa24.88■■□□□ 1.57
SIN3A-212ENST00000568919 SRCAPQ6ZRS2 3230 aa24.88■■□□□ 1.57
SIN3A-212ENST00000568919 TXNRD1Q16881 649 aa24.87■■□□□ 1.57
SIN3A-212ENST00000568919 NHSQ6T4R5 1651 aa24.86■■□□□ 1.57
SIN3A-212ENST00000568919 NSD2O96028 1365 aa24.86■■□□□ 1.57
SIN3A-212ENST00000568919 MORC1Q86VD1 984 aa24.86■■□□□ 1.57
SIN3A-212ENST00000568919 EYA1Q99502 592 aa24.85■■□□□ 1.57
SIN3A-212ENST00000568919 PRIM1P49642 420 aaKnown RBP24.83■■□□□ 1.57
SIN3A-212ENST00000568919 AMER1Q5JTC6 1135 aaPredicted RBP24.82■■□□□ 1.56
SIN3A-212ENST00000568919 SHANK3Q9BYB0 1731 aa24.82■■□□□ 1.56
SIN3A-212ENST00000568919 PER1O15534 1290 aaPredicted RBP24.81■■□□□ 1.56
SIN3A-212ENST00000568919 EIF4A2Q14240 407 aaKnown RBP24.81■■□□□ 1.56
SIN3A-212ENST00000568919 ANO8Q9HCE9 1232 aaPredicted RBP24.81■■□□□ 1.56
SIN3A-212ENST00000568919 BTAF1O14981 1849 aa24.8■■□□□ 1.56
SIN3A-212ENST00000568919 SYTL4Q96C24 671 aaPredicted RBP24.8■■□□□ 1.56
SIN3A-212ENST00000568919 NCAPD2Q15021 1401 aa24.79■■□□□ 1.56
SIN3A-212ENST00000568919 LRP5O75197 1615 aa24.78■■□□□ 1.56
SIN3A-212ENST00000568919 CYP27B1O15528 508 aa24.77■■□□□ 1.56
SIN3A-212ENST00000568919 PCDH11XQ9BZA7 1347 aa24.77■■□□□ 1.56
SIN3A-212ENST00000568919 PCDH11YQ9BZA8 1340 aa24.77■■□□□ 1.56
SIN3A-212ENST00000568919 STK32BQ9NY57 414 aa24.75■■□□□ 1.55
SIN3A-212ENST00000568919 SLC15A2Q16348 729 aa24.74■■□□□ 1.55
SIN3A-212ENST00000568919 LRRC4BQ9NT99 713 aa24.74■■□□□ 1.55
SIN3A-212ENST00000568919 SPG7Q9UQ90 795 aa24.74■■□□□ 1.55
SIN3A-212ENST00000568919 DOT1LQ8TEK3 1739 aa24.73■■□□□ 1.55
SIN3A-212ENST00000568919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.73■■□□□ 1.556e-9■■■■□ 22.1
SIN3A-212ENST00000568919 IGSF1Q8N6C5 1336 aa24.71■■□□□ 1.55
SIN3A-212ENST00000568919 CC2D1BQ5T0F9 858 aaKnown RBP24.71■■□□□ 1.55
SIN3A-212ENST00000568919 NKX1-1Q15270 411 aaPredicted RBP24.7■■□□□ 1.54
SIN3A-212ENST00000568919 SLC27A3Q5K4L6 730 aa24.7■■□□□ 1.54
SIN3A-212ENST00000568919 PDGFDQ9GZP0 370 aaPredicted RBP24.7■■□□□ 1.54
SIN3A-212ENST00000568919 PKD1L3Q7Z443 1732 aa24.69■■□□□ 1.54
SIN3A-212ENST00000568919 SPON1Q9HCB6 807 aa24.68■■□□□ 1.54
SIN3A-212ENST00000568919 MTHFSP49914 203 aa24.67■■□□□ 1.54
SIN3A-212ENST00000568919 KCNQ4P56696 695 aa24.67■■□□□ 1.54
SIN3A-212ENST00000568919 IL13P35225 146 aa24.66■■□□□ 1.54
SIN3A-212ENST00000568919 MPRIPQ6WCQ1 1025 aa24.66■■□□□ 1.54
SIN3A-212ENST00000568919 IFNL2Q8IZJ0 200 aa24.65■■□□□ 1.54
SIN3A-212ENST00000568919 PHKG2P15735 406 aa24.64■■□□□ 1.54
SIN3A-212ENST00000568919 ZNF827Q17R98 1081 aa24.64■■□□□ 1.54
SIN3A-212ENST00000568919 AKT1S1Q96B36 256 aa24.64■■□□□ 1.54
SIN3A-212ENST00000568919 NPC1L1Q9UHC9 1359 aa24.64■■□□□ 1.53
SIN3A-212ENST00000568919 CASZ1Q86V15 1759 aa24.63■■□□□ 1.53
SIN3A-212ENST00000568919 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
SIN3A-212ENST00000568919 AEBP1Q8IUX7 1158 aa24.63■■□□□ 1.53
SIN3A-212ENST00000568919 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
SIN3A-212ENST00000568919 LY75O60449 1722 aa24.62■■□□□ 1.53
SIN3A-212ENST00000568919 ZBTB7AO95365 584 aa24.62■■□□□ 1.53
SIN3A-212ENST00000568919 PLEKHO1Q53GL0 409 aaPredicted RBP24.62■■□□□ 1.53
SIN3A-212ENST00000568919 PIGBQ92521 554 aa24.62■■□□□ 1.53
SIN3A-212ENST00000568919 CCNL1Q9UK58 526 aaPredicted RBP24.62■■□□□ 1.53
SIN3A-212ENST00000568919 ITGB4P16144 1822 aa24.61■■□□□ 1.53
SIN3A-212ENST00000568919 SULT6B1Q6IMI4 303 aa24.61■■□□□ 1.53
SIN3A-212ENST00000568919 PLEKHG2Q9H7P9 1386 aa24.61■■□□□ 1.53
SIN3A-212ENST00000568919 ATF5Q9Y2D1 282 aaPredicted RBP24.6■■□□□ 1.53
SIN3A-212ENST00000568919 TOGARAM1Q9Y4F4 1720 aa24.6■■□□□ 1.53
SIN3A-212ENST00000568919 AMOTQ4VCS5 1084 aa24.59■■□□□ 1.53
SIN3A-212ENST00000568919 PPP1R1BQ9UD71 204 aaPredicted RBP24.58■■□□□ 1.53
SIN3A-212ENST00000568919 SMARCC1Q92922 1105 aaPredicted RBP24.57■■□□□ 1.52
SIN3A-212ENST00000568919 MTFR1LQ9H019 292 aa24.56■■□□□ 1.52
SIN3A-212ENST00000568919 TMOD3Q9NYL9 352 aa24.56■■□□□ 1.52
SIN3A-212ENST00000568919 TFCP2L1Q9NZI6 479 aa24.56■■□□□ 1.52
SIN3A-212ENST00000568919 KDRP35968 1356 aa24.55■■□□□ 1.52
SIN3A-212ENST00000568919 PALLDQ8WX93 1383 aa24.55■■□□□ 1.52
SIN3A-212ENST00000568919 DIAPH1O60610 1272 aaKnown RBP24.55■■□□□ 1.52
SIN3A-212ENST00000568919 PTGER2P43116 358 aa24.55■■□□□ 1.52
SIN3A-212ENST00000568919 ZNF530Q6P9A1 599 aaPredicted RBP24.55■■□□□ 1.52
SIN3A-212ENST00000568919 HSP90AB1P08238 724 aaKnown RBP24.54■■□□□ 1.52
SIN3A-212ENST00000568919 DCAF5Q96JK2 942 aa24.53■■□□□ 1.52
SIN3A-212ENST00000568919 ERVV-2B6SEH9 535 aa24.52■■□□□ 1.52
SIN3A-212ENST00000568919 ASAP1Q9ULH1 1129 aa24.52■■□□□ 1.52
SIN3A-212ENST00000568919 PNPLA7Q6ZV29 1317 aa24.52■■□□□ 1.52
SIN3A-212ENST00000568919 HMOX1P09601 288 aa24.51■■□□□ 1.51
SIN3A-212ENST00000568919 HMGB2P26583 209 aaKnown RBP24.5■■□□□ 1.51
SIN3A-212ENST00000568919 C1orf141Q5JVX7 400 aa24.5■■□□□ 1.51
SIN3A-212ENST00000568919 SGIP1Q9BQI5 828 aa24.5■■□□□ 1.51
SIN3A-212ENST00000568919 ATG3Q9NT62 314 aa24.5■■□□□ 1.51
SIN3A-212ENST00000568919 SLC16A10Q8TF71 515 aa24.49■■□□□ 1.51
SIN3A-212ENST00000568919 LOC102724428A0A0B4J2F2 783 aa24.48■■□□□ 1.51
SIN3A-212ENST00000568919 SIK1P57059 783 aa24.48■■□□□ 1.51
SIN3A-212ENST00000568919 QSER1Q2KHR3 1735 aa24.48■■□□□ 1.51
SIN3A-212ENST00000568919 TUBGCP6Q96RT7 1819 aa24.47■■□□□ 1.51
SIN3A-212ENST00000568919 KDM6AO15550 1401 aaPredicted RBP24.46■■□□□ 1.51
SIN3A-212ENST00000568919 CABP4P57796 275 aa24.46■■□□□ 1.51
SIN3A-212ENST00000568919 COL23A1Q86Y22 540 aaPredicted RBP24.46■■□□□ 1.51
SIN3A-212ENST00000568919 TAF1LQ8IZX4 1826 aa24.46■■□□□ 1.51
SIN3A-212ENST00000568919 C5P01031 1676 aa24.44■■□□□ 1.5
SIN3A-212ENST00000568919 AKAP4Q5JQC9 854 aa24.44■■□□□ 1.5
SIN3A-212ENST00000568919 COL3A1P02461 1466 aaPredicted RBP24.44■■□□□ 1.5
SIN3A-212ENST00000568919 U2SURPO15042 1029 aaKnown RBP24.43■■□□□ 1.5
SIN3A-212ENST00000568919 MSH5O43196 834 aa24.43■■□□□ 1.5
SIN3A-212ENST00000568919 PPP2R1AP30153 589 aa24.43■■□□□ 1.5
SIN3A-212ENST00000568919 ATP6V1AP38606 617 aa24.43■■□□□ 1.5
SIN3A-212ENST00000568919 NFATC2IPQ8NCF5 419 aa24.43■■□□□ 1.5
SIN3A-212ENST00000568919 MTHFSDQ2M296 383 aaKnown RBP24.42■■□□□ 1.5
SIN3A-212ENST00000568919 ARXQ96QS3 562 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms