RNA–Protein interactions for RNA: ENST00000567954.5

LYRM1-208, Transcript of LYR motif containing 1, human

APPRIS P1 TSL 1 (best) BASIC

Gene LYRM1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LYRM1-208	ENST00000567954	FAM50A	Q14320	339 aa	Known RBP	11.26	□□□□□ -0.61
LYRM1-208	ENST00000567954	HMGB2	P26583	209 aa	Known RBP	11.25	□□□□□ -0.61
LYRM1-208	ENST00000567954	CHADL	Q6NUI6	762 aa		11.25	□□□□□ -0.61
LYRM1-208	ENST00000567954	C14orf93	Q9H972	538 aa	Known RBP	11.25	□□□□□ -0.61
LYRM1-208	ENST00000567954	PPIP5K1	Q6PFW1	1433 aa		11.25	□□□□□ -0.61
LYRM1-208	ENST00000567954	TNRC6C	Q9HCJ0	1690 aa	Known RBP	11.24	□□□□□ -0.61
LYRM1-208	ENST00000567954	POTEC	B2RU33	542 aa		11.24	□□□□□ -0.61
LYRM1-208	ENST00000567954	ROCK1	Q13464	1354 aa		11.24	□□□□□ -0.61
LYRM1-208	ENST00000567954	PIK3C2G	O75747	1445 aa		11.24	□□□□□ -0.61
LYRM1-208	ENST00000567954	BTAF1	O14981	1849 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	TUBGCP6	Q96RT7	1819 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	TMEM88B	A6NKF7	163 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	DPEP1	P16444	411 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	SOX10	P56693	466 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	NUDT16	Q96DE0	195 aa	Known RBP	11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	DCAF5	Q96JK2	942 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	BEGAIN	Q9BUH8	593 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	POLR3A	O14802	1390 aa	Predicted RBP	11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	ABCC6	O95255	1503 aa		11.23	□□□□□ -0.61
LYRM1-208	ENST00000567954	RASSF10	A6NK89	507 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	KIF1B	O60333	1816 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	ACE	P12821	1306 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	PRIM1	P49642	420 aa	Known RBP	11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	FXR1	P51114	621 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	SPATA31E1	Q6ZUB1	1445 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	SMIM5	Q71RC9	77 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	PASK	Q96RG2	1323 aa		11.22	□□□□□ -0.61
LYRM1-208	ENST00000567954	ERBB3	P21860	1342 aa		11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	WDR33	Q9C0J8	1336 aa	Known RBP	11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	DGKZ	Q13574	1117 aa		11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	DEFB115	Q30KQ5	88 aa		11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	NBPF15	Q8N660	670 aa		11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	SLC17A8	Q8NDX2	589 aa		11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	SYTL4	Q96C24	671 aa	Predicted RBP	11.21	□□□□□ -0.61
LYRM1-208	ENST00000567954	IL2RB	P14784	551 aa		11.2	□□□□□ -0.62
LYRM1-208	ENST00000567954	PPL	O60437	1756 aa		11.2	□□□□□ -0.62
LYRM1-208	ENST00000567954	COL18A1	P39060	1754 aa		11.19	□□□□□ -0.62
LYRM1-208	ENST00000567954	KCNA3	P22001	575 aa		11.19	□□□□□ -0.62
LYRM1-208	ENST00000567954	RGL3	Q3MIN7	710 aa		11.19	□□□□□ -0.62
LYRM1-208	ENST00000567954	ARHGEF25	Q86VW2	580 aa		11.19	□□□□□ -0.62
LYRM1-208	ENST00000567954	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.19	□□□□□ -0.62
LYRM1-208	ENST00000567954	PLEKHG3	A1L390	1219 aa		11.18	□□□□□ -0.62
LYRM1-208	ENST00000567954	DALRD3	Q5D0E6	543 aa	Known RBP	11.18	□□□□□ -0.62
LYRM1-208	ENST00000567954	CFAP70	Q5T0N1	1121 aa		11.18	□□□□□ -0.62
LYRM1-208	ENST00000567954	PIM2	Q9P1W9	311 aa		11.18	□□□□□ -0.62
LYRM1-208	ENST00000567954	ANKRD36B	Q8N2N9	1353 aa		11.17	□□□□□ -0.62
LYRM1-208	ENST00000567954	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.17	□□□□□ -0.62
LYRM1-208	ENST00000567954	MMP10	P09238	476 aa		11.17	□□□□□ -0.62
LYRM1-208	ENST00000567954	NLRP6	P59044	892 aa		11.17	□□□□□ -0.62
LYRM1-208	ENST00000567954	AMIGO3	Q86WK7	504 aa		11.17	□□□□□ -0.62
LYRM1-208	ENST00000567954	NSD2	O96028	1365 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	WNK3	Q9BYP7	1800 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	POTEI	P0CG38	1075 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	POTEJ	P0CG39	1038 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	DPY19L2	Q6NUT2	758 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	AK7	Q96M32	723 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	TSKS	Q9UJT2	592 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	CCDC61	Q9Y6R9	512 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	USP47	Q96K76	1375 aa		11.16	□□□□□ -0.62
LYRM1-208	ENST00000567954	PHF14	O94880	888 aa		11.15	□□□□□ -0.62
LYRM1-208	ENST00000567954	LMNB1	P20700	586 aa		11.15	□□□□□ -0.62
LYRM1-208	ENST00000567954	DDX54	Q8TDD1	881 aa	Known RBP	11.15	□□□□□ -0.62
LYRM1-208	ENST00000567954	KDM6A	O15550	1401 aa	Predicted RBP	11.15	□□□□□ -0.62
LYRM1-208	ENST00000567954	PKD1L3	Q7Z443	1732 aa		11.15	□□□□□ -0.63
LYRM1-208	ENST00000567954	CA12	O43570	354 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	SSFA2	P28290	1259 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	CCDC87	Q9NVE4	849 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	TRAK1	Q9UPV9	953 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	CPSF1	Q10570	1443 aa	Known RBP	11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	CUL9	Q8IWT3	2517 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	PIK3C2A	O00443	1686 aa		11.14	□□□□□ -0.63
LYRM1-208	ENST00000567954	ITGBL1	O95965	494 aa	Predicted RBP	11.13	□□□□□ -0.63
LYRM1-208	ENST00000567954	NSD3	Q9BZ95	1437 aa		11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	RASSF7	Q02833	373 aa		11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	LDHD	Q86WU2	507 aa		11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	GPR101	Q96P66	508 aa	Predicted RBP	11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	NLRP2	Q9NX02	1062 aa		11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	SZT2	Q5T011	3432 aa		11.12	□□□□□ -0.63
LYRM1-208	ENST00000567954	SLIT3	O75094	1523 aa		11.11	□□□□□ -0.63
LYRM1-208	ENST00000567954	VIRMA	Q69YN4	1812 aa	Known RBP	11.11	□□□□□ -0.63
LYRM1-208	ENST00000567954	ECE1	P42892	770 aa		11.1	□□□□□ -0.63
LYRM1-208	ENST00000567954	KCNH5	Q8NCM2	988 aa		11.1	□□□□□ -0.63
LYRM1-208	ENST00000567954	CDK19	Q9BWU1	502 aa		11.1	□□□□□ -0.63
LYRM1-208	ENST00000567954	NLGN1	Q8N2Q7	840 aa		11.09	□□□□□ -0.63
LYRM1-208	ENST00000567954	CAPNS2	Q96L46	248 aa		11.09	□□□□□ -0.63
LYRM1-208	ENST00000567954	ABT1	Q9ULW3	272 aa	Known RBP	11.09	□□□□□ -0.63
LYRM1-208	ENST00000567954	LY75	O60449	1722 aa		11.09	□□□□□ -0.63
LYRM1-208	ENST00000567954	KIAA1551	Q9HCM1	1747 aa		11.09	□□□□□ -0.63
LYRM1-208	ENST00000567954	QRICH2	Q9H0J4	1663 aa		11.08	□□□□□ -0.64
LYRM1-208	ENST00000567954	MAP2K2	P36507	400 aa		11.08	□□□□□ -0.64
LYRM1-208	ENST00000567954	APLP2	Q06481	763 aa		11.08	□□□□□ -0.64
LYRM1-208	ENST00000567954	USP54	Q70EL1	1684 aa		11.08	□□□□□ -0.64
LYRM1-208	ENST00000567954	MNX1	P50219	401 aa	Predicted RBP	11.07	□□□□□ -0.64
LYRM1-208	ENST00000567954	TMF1	P82094	1093 aa		11.06	□□□□□ -0.64
LYRM1-208	ENST00000567954	PARP3	Q9Y6F1	533 aa		11.05	□□□□□ -0.64
LYRM1-208	ENST00000567954	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.05	□□□□□ -0.64
LYRM1-208	ENST00000567954	KIF13B	Q9NQT8	1826 aa		11.05	□□□□□ -0.64
LYRM1-208	ENST00000567954	PALLD	Q8WX93	1383 aa		11.04	□□□□□ -0.64
LYRM1-208	ENST00000567954	IQCA1L	A6NCM1	817 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms