RNA–Protein interactions for RNA: ENST00000567139.1

CLCN7-211, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-211ENST00000567139 ACSBG1Q96GR2 724 aa28.28■■■□□ 2.12
CLCN7-211ENST00000567139 CAMKK2Q96RR4 588 aa28.27■■■□□ 2.12
CLCN7-211ENST00000567139 BCL11BQ9C0K0 894 aaPredicted RBP28.27■■■□□ 2.12
CLCN7-211ENST00000567139 NPC1L1Q9UHC9 1359 aa28.26■■■□□ 2.12
CLCN7-211ENST00000567139 NCAPD2Q15021 1401 aa28.26■■■□□ 2.11
CLCN7-211ENST00000567139 NHSQ6T4R5 1651 aa28.26■■■□□ 2.11
CLCN7-211ENST00000567139 KCNQ2O43526 872 aa28.25■■■□□ 2.11
CLCN7-211ENST00000567139 RREB1Q92766 1687 aa28.23■■■□□ 2.11
CLCN7-211ENST00000567139 MTHFSP49914 203 aa28.22■■■□□ 2.11
CLCN7-211ENST00000567139 PARD3Q8TEW0 1356 aa28.21■■■□□ 2.11
CLCN7-211ENST00000567139 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
CLCN7-211ENST00000567139 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.1
CLCN7-211ENST00000567139 PKD1L3Q7Z443 1732 aa28.2■■■□□ 2.1
CLCN7-211ENST00000567139 IGSF1Q8N6C5 1336 aa28.18■■■□□ 2.1
CLCN7-211ENST00000567139 NUP188Q5SRE5 1749 aa28.18■■■□□ 2.1
CLCN7-211ENST00000567139 BTAF1O14981 1849 aa28.18■■■□□ 2.1
CLCN7-211ENST00000567139 RGPD3A6NKT7 1758 aaPredicted RBP28.18■■■□□ 2.1
CLCN7-211ENST00000567139 RGPD4Q7Z3J3 1758 aa28.18■■■□□ 2.1
CLCN7-211ENST00000567139 PLSCR1O15162 318 aa28.17■■■□□ 2.1
CLCN7-211ENST00000567139 PCDH11XQ9BZA7 1347 aa28.17■■■□□ 2.1
CLCN7-211ENST00000567139 PCDH11YQ9BZA8 1340 aa28.17■■■□□ 2.1
CLCN7-211ENST00000567139 IL13P35225 146 aa28.15■■■□□ 2.1
CLCN7-211ENST00000567139 SYTL4Q96C24 671 aaPredicted RBP28.14■■■□□ 2.1
CLCN7-211ENST00000567139 PSDA5PKW4 1024 aaPredicted RBP28.13■■■□□ 2.09
CLCN7-211ENST00000567139 CYP27B1O15528 508 aa28.13■■■□□ 2.09
CLCN7-211ENST00000567139 SPG7Q9UQ90 795 aa28.13■■■□□ 2.09
CLCN7-211ENST00000567139 PRIM1P49642 420 aaKnown RBP28.12■■■□□ 2.09
CLCN7-211ENST00000567139 AEBP1Q8IUX7 1158 aa28.12■■■□□ 2.09
CLCN7-211ENST00000567139 R3HDM1Q15032 1099 aaKnown RBP28.09■■■□□ 2.09
CLCN7-211ENST00000567139 SULT6B1Q6IMI4 303 aa28.09■■■□□ 2.09
CLCN7-211ENST00000567139 PROM2Q8N271 834 aa28.09■■■□□ 2.09
CLCN7-211ENST00000567139 DIAPH1O60610 1272 aaKnown RBP28.08■■■□□ 2.09
CLCN7-211ENST00000567139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.08■■■□□ 2.09
CLCN7-211ENST00000567139 TOGARAM1Q9Y4F4 1720 aa28.07■■■□□ 2.08
CLCN7-211ENST00000567139 DDX10Q13206 875 aaKnown RBP28.07■■■□□ 2.08
CLCN7-211ENST00000567139 TXNRD1Q16881 649 aa28.07■■■□□ 2.08
CLCN7-211ENST00000567139 NBPF14Q5TI25 921 aa28.06■■■□□ 2.08
CLCN7-211ENST00000567139 COL3A1P02461 1466 aaPredicted RBP28.05■■■□□ 2.08
CLCN7-211ENST00000567139 ITGB4P16144 1822 aa28.05■■■□□ 2.08
CLCN7-211ENST00000567139 PPP2R1AP30153 589 aa28.04■■■□□ 2.08
CLCN7-211ENST00000567139 KDRP35968 1356 aa28.03■■■□□ 2.08
CLCN7-211ENST00000567139 HMOX1P09601 288 aa28.03■■■□□ 2.08
CLCN7-211ENST00000567139 PHKG2P15735 406 aa28.03■■■□□ 2.08
CLCN7-211ENST00000567139 PLEKHO1Q53GL0 409 aaPredicted RBP28.03■■■□□ 2.08
CLCN7-211ENST00000567139 IFNL2Q8IZJ0 200 aa28.03■■■□□ 2.08
CLCN7-211ENST00000567139 PLEKHG2Q9H7P9 1386 aa28.02■■■□□ 2.08
CLCN7-211ENST00000567139 NKX1-1Q15270 411 aaPredicted RBP28.02■■■□□ 2.08
CLCN7-211ENST00000567139 ZNF530Q6P9A1 599 aaPredicted RBP28■■■□□ 2.07
CLCN7-211ENST00000567139 CFAP53Q96M91 514 aa28■■■□□ 2.07
CLCN7-211ENST00000567139 ANO8Q9HCE9 1232 aaPredicted RBP28■■■□□ 2.07
CLCN7-211ENST00000567139 U2SURPO15042 1029 aaKnown RBP27.99■■■□□ 2.07
CLCN7-211ENST00000567139 AMOTQ4VCS5 1084 aa27.99■■■□□ 2.07
CLCN7-211ENST00000567139 MPRIPQ6WCQ1 1025 aa27.99■■■□□ 2.07
CLCN7-211ENST00000567139 LY75O60449 1722 aa27.98■■■□□ 2.07
CLCN7-211ENST00000567139 LRRC4BQ9NT99 713 aa27.95■■■□□ 2.06
CLCN7-211ENST00000567139 KCNQ4P56696 695 aa27.93■■■□□ 2.06
CLCN7-211ENST00000567139 C1orf141Q5JVX7 400 aa27.93■■■□□ 2.06
CLCN7-211ENST00000567139 STK32BQ9NY57 414 aa27.93■■■□□ 2.06
CLCN7-211ENST00000567139 HSP90AB1P08238 724 aaKnown RBP27.92■■■□□ 2.06
CLCN7-211ENST00000567139 PIGBQ92521 554 aa27.92■■■□□ 2.06
CLCN7-211ENST00000567139 PAPPAQ13219 1627 aa27.92■■■□□ 2.06
CLCN7-211ENST00000567139 TMOD3Q9NYL9 352 aa27.91■■■□□ 2.06
CLCN7-211ENST00000567139 SLC27A3Q5K4L6 730 aa27.9■■■□□ 2.06
CLCN7-211ENST00000567139 DCAF5Q96JK2 942 aa27.9■■■□□ 2.06
CLCN7-211ENST00000567139 SLC15A2Q16348 729 aa27.89■■■□□ 2.06
CLCN7-211ENST00000567139 CCNL1Q9UK58 526 aaPredicted RBP27.89■■■□□ 2.06
CLCN7-211ENST00000567139 NUDCQ9Y266 331 aa27.89■■■□□ 2.06
CLCN7-211ENST00000567139 KDM6AO15550 1401 aaPredicted RBP27.89■■■□□ 2.06
CLCN7-211ENST00000567139 PALLDQ8WX93 1383 aa27.88■■■□□ 2.05
CLCN7-211ENST00000567139 VIRMAQ69YN4 1812 aaKnown RBP27.86■■■□□ 2.05
CLCN7-211ENST00000567139 ZNF827Q17R98 1081 aa27.86■■■□□ 2.05
CLCN7-211ENST00000567139 MTHFSDQ2M296 383 aaKnown RBP27.86■■■□□ 2.05
CLCN7-211ENST00000567139 SCN11AQ9UI33 1791 aa27.86■■■□□ 2.05
CLCN7-211ENST00000567139 ERVV-2B6SEH9 535 aa27.85■■■□□ 2.05
CLCN7-211ENST00000567139 RALBP1Q15311 655 aa27.85■■■□□ 2.05
CLCN7-211ENST00000567139 AKAP4Q5JQC9 854 aa27.85■■■□□ 2.05
CLCN7-211ENST00000567139 SMARCC1Q92922 1105 aaPredicted RBP27.85■■■□□ 2.05
CLCN7-211ENST00000567139 LRP5O75197 1615 aa27.85■■■□□ 2.05
CLCN7-211ENST00000567139 U2AF1L5P0DN76 240 aaPredicted RBP27.84■■■□□ 2.05
CLCN7-211ENST00000567139 U2AF1Q01081 240 aaKnown RBP eCLIP27.84■■■□□ 2.05
CLCN7-211ENST00000567139 ASAP1Q9ULH1 1129 aa27.84■■■□□ 2.05
CLCN7-211ENST00000567139 CASZ1Q86V15 1759 aa27.83■■■□□ 2.05
CLCN7-211ENST00000567139 CABP4P57796 275 aa27.83■■■□□ 2.05
CLCN7-211ENST00000567139 PDGFDQ9GZP0 370 aaPredicted RBP27.83■■■□□ 2.05
CLCN7-211ENST00000567139 C5P01031 1676 aa27.81■■■□□ 2.04
CLCN7-211ENST00000567139 TAF1LQ8IZX4 1826 aa27.81■■■□□ 2.04
CLCN7-211ENST00000567139 PRKAR2BP31323 418 aa27.81■■■□□ 2.04
CLCN7-211ENST00000567139 AKT1S1Q96B36 256 aa27.81■■■□□ 2.04
CLCN7-211ENST00000567139 RSPH6AQ9H0K4 717 aa27.81■■■□□ 2.04
CLCN7-211ENST00000567139 ATG3Q9NT62 314 aa27.8■■■□□ 2.04
CLCN7-211ENST00000567139 TUBGCP6Q96RT7 1819 aa27.8■■■□□ 2.04
CLCN7-211ENST00000567139 LGR6Q9HBX8 967 aa27.79■■■□□ 2.04
CLCN7-211ENST00000567139 ZNF316A6NFI3 1004 aaPredicted RBP27.78■■■□□ 2.04
CLCN7-211ENST00000567139 NFATC2IPQ8NCF5 419 aa27.77■■■□□ 2.04
CLCN7-211ENST00000567139 PHACTR3Q96KR7 559 aa27.77■■■□□ 2.04
CLCN7-211ENST00000567139 LOC102724428A0A0B4J2F2 783 aa27.76■■■□□ 2.03
CLCN7-211ENST00000567139 RNMTO43148 476 aaKnown RBP27.76■■■□□ 2.03
CLCN7-211ENST00000567139 SIK1P57059 783 aa27.76■■■□□ 2.03
CLCN7-211ENST00000567139 GAS2L2Q8NHY3 880 aa27.76■■■□□ 2.03
CLCN7-211ENST00000567139 QSER1Q2KHR3 1735 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms