RNA–Protein interactions for RNA: ENST00000566749.5

PPP4C-209, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 5

Gene PPP4C, Length 1,490 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-209	ENST00000566749	MTHFS	P49914	203 aa		33.42	■■■□□ 2.94
PPP4C-209	ENST00000566749	EZH2	Q15910	746 aa	Known RBP	33.42	■■■□□ 2.94
PPP4C-209	ENST00000566749	KAT6B	Q8WYB5	2073 aa		33.41	■■■□□ 2.94
PPP4C-209	ENST00000566749	PTF1A	Q7RTS3	328 aa		33.41	■■■□□ 2.94
PPP4C-209	ENST00000566749	ACSBG1	Q96GR2	724 aa		33.41	■■■□□ 2.94
PPP4C-209	ENST00000566749	SHANK3	Q9BYB0	1731 aa		33.4	■■■□□ 2.94
PPP4C-209	ENST00000566749	CAMKK2	Q96RR4	588 aa		33.4	■■■□□ 2.94
PPP4C-209	ENST00000566749	KCNQ2	O43526	872 aa		33.37	■■■□□ 2.93
PPP4C-209	ENST00000566749	IGSF1	Q8N6C5	1336 aa		33.37	■■■□□ 2.93
PPP4C-209	ENST00000566749	PARD3	Q8TEW0	1356 aa		33.37	■■■□□ 2.93
PPP4C-209	ENST00000566749	NHS	Q6T4R5	1651 aa		33.35	■■■□□ 2.93
PPP4C-209	ENST00000566749	PCDH11X	Q9BZA7	1347 aa		33.35	■■■□□ 2.93
PPP4C-209	ENST00000566749	PCDH11Y	Q9BZA8	1340 aa		33.35	■■■□□ 2.93
PPP4C-209	ENST00000566749	PLSCR1	O15162	318 aa		33.31	■■■□□ 2.92
PPP4C-209	ENST00000566749	IL13	P35225	146 aa		33.31	■■■□□ 2.92
PPP4C-209	ENST00000566749	SPG7	Q9UQ90	795 aa		33.31	■■■□□ 2.92
PPP4C-209	ENST00000566749	PKD1L3	Q7Z443	1732 aa		33.31	■■■□□ 2.92
PPP4C-209	ENST00000566749	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.28	■■■□□ 2.92
PPP4C-209	ENST00000566749	RGPD4	Q7Z3J3	1758 aa		33.28	■■■□□ 2.92
PPP4C-209	ENST00000566749	SYTL4	Q96C24	671 aa	Predicted RBP	33.28	■■■□□ 2.92
PPP4C-209	ENST00000566749	DOT1L	Q8TEK3	1739 aa		33.27	■■■□□ 2.92
PPP4C-209	ENST00000566749	RREB1	Q92766	1687 aa		33.27	■■■□□ 2.92
PPP4C-209	ENST00000566749	CYP27B1	O15528	508 aa		33.27	■■■□□ 2.92
PPP4C-209	ENST00000566749	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
PPP4C-209	ENST00000566749	DIAPH1	O60610	1272 aa	Known RBP	33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	PRIM1	P49642	420 aa	Known RBP	33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	DDX10	Q13206	875 aa	Known RBP	33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	SULT6B1	Q6IMI4	303 aa		33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	AEBP1	Q8IUX7	1158 aa		33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	BTAF1	O14981	1849 aa		33.25	■■■□□ 2.91
PPP4C-209	ENST00000566749	PLEKHG2	Q9H7P9	1386 aa		33.22	■■■□□ 2.91
PPP4C-209	ENST00000566749	NUP188	Q5SRE5	1749 aa		33.22	■■■□□ 2.91
PPP4C-209	ENST00000566749	PPP2R1A	P30153	589 aa		33.21	■■■□□ 2.91
PPP4C-209	ENST00000566749	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.19	■■■□□ 2.9
PPP4C-209	ENST00000566749	CFAP53	Q96M91	514 aa		33.19	■■■□□ 2.9
PPP4C-209	ENST00000566749	KDR	P35968	1356 aa		33.19	■■■□□ 2.9
PPP4C-209	ENST00000566749	PSD	A5PKW4	1024 aa	Predicted RBP	33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	TXNRD1	Q16881	649 aa		33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	NBPF14	Q5TI25	921 aa		33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	IFNL2	Q8IZJ0	200 aa		33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	COL3A1	P02461	1466 aa	Predicted RBP	33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	PROM2	Q8N271	834 aa		33.18	■■■□□ 2.9
PPP4C-209	ENST00000566749	PHKG2	P15735	406 aa		33.17	■■■□□ 2.9
PPP4C-209	ENST00000566749	HMOX1	P09601	288 aa		33.16	■■■□□ 2.9
PPP4C-209	ENST00000566749	NKX1-1	Q15270	411 aa	Predicted RBP	33.16	■■■□□ 2.9
PPP4C-209	ENST00000566749	AMOT	Q4VCS5	1084 aa		33.16	■■■□□ 2.9
PPP4C-209	ENST00000566749	R3HDM1	Q15032	1099 aa	Known RBP	33.15	■■■□□ 2.9
PPP4C-209	ENST00000566749	U2SURP	O15042	1029 aa	Known RBP	33.13	■■■□□ 2.89
PPP4C-209	ENST00000566749	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.12	■■■□□ 2.89
PPP4C-209	ENST00000566749	MPRIP	Q6WCQ1	1025 aa		33.12	■■■□□ 2.89
PPP4C-209	ENST00000566749	TOGARAM1	Q9Y4F4	1720 aa		33.11	■■■□□ 2.89
PPP4C-209	ENST00000566749	ITGB4	P16144	1822 aa		33.09	■■■□□ 2.89
PPP4C-209	ENST00000566749	HSP90AB1	P08238	724 aa	Known RBP	33.07	■■■□□ 2.88
PPP4C-209	ENST00000566749	C1orf141	Q5JVX7	400 aa		33.07	■■■□□ 2.88
PPP4C-209	ENST00000566749	NUDC	Q9Y266	331 aa		33.06	■■■□□ 2.88
PPP4C-209	ENST00000566749	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.05	■■■□□ 2.88
PPP4C-209	ENST00000566749	RALBP1	Q15311	655 aa		33.04	■■■□□ 2.88
PPP4C-209	ENST00000566749	DCAF5	Q96JK2	942 aa		33.04	■■■□□ 2.88
PPP4C-209	ENST00000566749	SLC27A3	Q5K4L6	730 aa		33.03	■■■□□ 2.88
PPP4C-209	ENST00000566749	TMOD3	Q9NYL9	352 aa		33.03	■■■□□ 2.88
PPP4C-209	ENST00000566749	PIGB	Q92521	554 aa		33.02	■■■□□ 2.88
PPP4C-209	ENST00000566749	LY75	O60449	1722 aa		33.01	■■■□□ 2.88
PPP4C-209	ENST00000566749	LRRC4B	Q9NT99	713 aa		33.01	■■■□□ 2.88
PPP4C-209	ENST00000566749	STK32B	Q9NY57	414 aa		33.01	■■■□□ 2.88
PPP4C-209	ENST00000566749	SRCAP	Q6ZRS2	3230 aa		32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	ERVV-2	B6SEH9	535 aa		32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	AKAP4	Q5JQC9	854 aa		32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	CCNL1	Q9UK58	526 aa	Predicted RBP	32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	PALLD	Q8WX93	1383 aa		32.98	■■■□□ 2.87
PPP4C-209	ENST00000566749	KDM6A	O15550	1401 aa	Predicted RBP	32.97	■■■□□ 2.87
PPP4C-209	ENST00000566749	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.97	■■■□□ 2.87
PPP4C-209	ENST00000566749	KCNQ4	P56696	695 aa		32.97	■■■□□ 2.87
PPP4C-209	ENST00000566749	SLC15A2	Q16348	729 aa		32.97	■■■□□ 2.87
PPP4C-209	ENST00000566749	SMARCC1	Q92922	1105 aa	Predicted RBP	32.97	■■■□□ 2.87
PPP4C-209	ENST00000566749	MTHFSD	Q2M296	383 aa	Known RBP	32.96	■■■□□ 2.87
PPP4C-209	ENST00000566749	PAPPA	Q13219	1627 aa		32.95	■■■□□ 2.87
PPP4C-209	ENST00000566749	CABP4	P57796	275 aa		32.93	■■■□□ 2.86
PPP4C-209	ENST00000566749	PRKAR2B	P31323	418 aa		32.93	■■■□□ 2.86
PPP4C-209	ENST00000566749	RSPH6A	Q9H0K4	717 aa		32.93	■■■□□ 2.86
PPP4C-209	ENST00000566749	ASAP1	Q9ULH1	1129 aa		32.91	■■■□□ 2.86
PPP4C-209	ENST00000566749	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.9	■■■□□ 2.86
PPP4C-209	ENST00000566749	SCN11A	Q9UI33	1791 aa		32.9	■■■□□ 2.86
PPP4C-209	ENST00000566749	ZNF827	Q17R98	1081 aa		32.89	■■■□□ 2.86
PPP4C-209	ENST00000566749	GAS2L2	Q8NHY3	880 aa		32.89	■■■□□ 2.86
PPP4C-209	ENST00000566749	FCHSD2	O94868	740 aa		32.88	■■■□□ 2.85
PPP4C-209	ENST00000566749	ATG3	Q9NT62	314 aa		32.87	■■■□□ 2.85
PPP4C-209	ENST00000566749	NFATC2IP	Q8NCF5	419 aa		32.86	■■■□□ 2.85
PPP4C-209	ENST00000566749	AKT1S1	Q96B36	256 aa		32.86	■■■□□ 2.85
PPP4C-209	ENST00000566749	PHACTR3	Q96KR7	559 aa		32.86	■■■□□ 2.85
PPP4C-209	ENST00000566749	LGR6	Q9HBX8	967 aa		32.86	■■■□□ 2.85
PPP4C-209	ENST00000566749	RNMT	O43148	476 aa	Known RBP	32.85	■■■□□ 2.85
PPP4C-209	ENST00000566749	HMGB2	P26583	209 aa	Known RBP	32.85	■■■□□ 2.85
PPP4C-209	ENST00000566749	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.85	■■■□□ 2.85
PPP4C-209	ENST00000566749	VIRMA	Q69YN4	1812 aa	Known RBP	32.84	■■■□□ 2.85
PPP4C-209	ENST00000566749	LOC102724428	A0A0B4J2F2	783 aa		32.84	■■■□□ 2.85
PPP4C-209	ENST00000566749	SIK1	P57059	783 aa		32.84	■■■□□ 2.85
PPP4C-209	ENST00000566749	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.84	■■■□□ 2.85
PPP4C-209	ENST00000566749	C5	P01031	1676 aa		32.83	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms