RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 FAM196AQ6ZSG2 479 aa18.55■□□□□ 0.56
SPG7-215ENST00000566682 EYA1Q99502 592 aa18.55■□□□□ 0.56
SPG7-215ENST00000566682 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
SPG7-215ENST00000566682 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
SPG7-215ENST00000566682 ZNF316A6NFI3 1004 aaPredicted RBP18.53■□□□□ 0.56
SPG7-215ENST00000566682 TNS2Q63HR2 1409 aa18.53■□□□□ 0.56
SPG7-215ENST00000566682 EP400Q96L91 3159 aa18.52■□□□□ 0.56
SPG7-215ENST00000566682 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
SPG7-215ENST00000566682 RAPGEF4Q8WZA2 1011 aa18.52■□□□□ 0.56
SPG7-215ENST00000566682 MEGF6O75095 1541 aa18.52■□□□□ 0.56
SPG7-215ENST00000566682 OVOS2A0A0G2JMS6 1433 aa18.51■□□□□ 0.55
SPG7-215ENST00000566682 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
SPG7-215ENST00000566682 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
SPG7-215ENST00000566682 SBF2Q86WG5 1849 aa18.5■□□□□ 0.55
SPG7-215ENST00000566682 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 ABCB7O75027 752 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 TRIM37O94972 964 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 IL13P35225 146 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
SPG7-215ENST00000566682 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
SPG7-215ENST00000566682 SHANK3Q9BYB0 1731 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
SPG7-215ENST00000566682 DDX54Q8TDD1 881 aaKnown RBP18.48■□□□□ 0.55
SPG7-215ENST00000566682 TNS1Q9HBL0 1735 aaKnown RBP18.46■□□□□ 0.55
SPG7-215ENST00000566682 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
SPG7-215ENST00000566682 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
SPG7-215ENST00000566682 BCL9O00512 1426 aa18.46■□□□□ 0.55
SPG7-215ENST00000566682 KAT6BQ8WYB5 2073 aa18.46■□□□□ 0.55
SPG7-215ENST00000566682 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
SPG7-215ENST00000566682 DEFB132Q7Z7B7 95 aa18.44■□□□□ 0.54
SPG7-215ENST00000566682 COL3A1P02461 1466 aaPredicted RBP18.44■□□□□ 0.54
SPG7-215ENST00000566682 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
SPG7-215ENST00000566682 AEBP1Q8IUX7 1158 aa18.43■□□□□ 0.54
SPG7-215ENST00000566682 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
SPG7-215ENST00000566682 BAG6P46379 1132 aa18.42■□□□□ 0.54
SPG7-215ENST00000566682 RALBP1Q15311 655 aa18.42■□□□□ 0.54
SPG7-215ENST00000566682 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
SPG7-215ENST00000566682 SPG7Q9UQ90 795 aa18.42■□□□□ 0.54
SPG7-215ENST00000566682 APBA3O96018 575 aa18.41■□□□□ 0.54
SPG7-215ENST00000566682 PTF1AQ7RTS3 328 aa18.41■□□□□ 0.54
SPG7-215ENST00000566682 BCL11BQ9C0K0 894 aaPredicted RBP18.41■□□□□ 0.54
SPG7-215ENST00000566682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
SPG7-215ENST00000566682 PCDH11XQ9BZA7 1347 aa18.41■□□□□ 0.54
SPG7-215ENST00000566682 PCDH11YQ9BZA8 1340 aa18.41■□□□□ 0.54
SPG7-215ENST00000566682 KDRP35968 1356 aa18.41■□□□□ 0.54
SPG7-215ENST00000566682 CYP27B1O15528 508 aa18.4■□□□□ 0.54
SPG7-215ENST00000566682 KCNQ2O43526 872 aa18.4■□□□□ 0.54
SPG7-215ENST00000566682 HMOX1P09601 288 aa18.4■□□□□ 0.54
SPG7-215ENST00000566682 EN1Q05925 392 aaPredicted RBP18.4■□□□□ 0.54
SPG7-215ENST00000566682 NHSQ6T4R5 1651 aa18.39■□□□□ 0.53
SPG7-215ENST00000566682 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
SPG7-215ENST00000566682 PLEKHG2Q9H7P9 1386 aa18.38■□□□□ 0.53
SPG7-215ENST00000566682 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
SPG7-215ENST00000566682 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
SPG7-215ENST00000566682 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
SPG7-215ENST00000566682 EZH2Q15910 746 aaKnown RBP18.36■□□□□ 0.53
SPG7-215ENST00000566682 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
SPG7-215ENST00000566682 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
SPG7-215ENST00000566682 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
SPG7-215ENST00000566682 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
SPG7-215ENST00000566682 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
SPG7-215ENST00000566682 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
SPG7-215ENST00000566682 PHKG2P15735 406 aa18.35■□□□□ 0.53
SPG7-215ENST00000566682 PRIM1P49642 420 aaKnown RBP18.35■□□□□ 0.53
SPG7-215ENST00000566682 BTAF1O14981 1849 aa18.35■□□□□ 0.53
SPG7-215ENST00000566682 PLSCR1O15162 318 aa18.34■□□□□ 0.53
SPG7-215ENST00000566682 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
SPG7-215ENST00000566682 SYTL4Q96C24 671 aaPredicted RBP18.34■□□□□ 0.53
SPG7-215ENST00000566682 ITGB4P16144 1822 aa18.33■□□□□ 0.52
SPG7-215ENST00000566682 TOGARAM1Q9Y4F4 1720 aa18.32■□□□□ 0.52
SPG7-215ENST00000566682 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
SPG7-215ENST00000566682 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
SPG7-215ENST00000566682 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
SPG7-215ENST00000566682 RGPD3A6NKT7 1758 aaPredicted RBP18.31■□□□□ 0.52
SPG7-215ENST00000566682 RGPD4Q7Z3J3 1758 aa18.31■□□□□ 0.52
SPG7-215ENST00000566682 RREB1Q92766 1687 aa18.3■□□□□ 0.52
SPG7-215ENST00000566682 MTHFSDQ2M296 383 aaKnown RBP18.29■□□□□ 0.52
SPG7-215ENST00000566682 C1orf141Q5JVX7 400 aa18.29■□□□□ 0.52
SPG7-215ENST00000566682 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
SPG7-215ENST00000566682 FCHSD2O94868 740 aa18.28■□□□□ 0.52
SPG7-215ENST00000566682 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
SPG7-215ENST00000566682 PRKAR2BP31323 418 aa18.28■□□□□ 0.52
SPG7-215ENST00000566682 MPRIPQ6WCQ1 1025 aa18.28■□□□□ 0.52
SPG7-215ENST00000566682 PROM2Q8N271 834 aa18.28■□□□□ 0.52
SPG7-215ENST00000566682 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
SPG7-215ENST00000566682 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
SPG7-215ENST00000566682 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
SPG7-215ENST00000566682 TXNRD1Q16881 649 aa18.26■□□□□ 0.51
SPG7-215ENST00000566682 AKAP4Q5JQC9 854 aa18.26■□□□□ 0.51
SPG7-215ENST00000566682 PHACTR3Q96KR7 559 aa18.26■□□□□ 0.51
SPG7-215ENST00000566682 SCN11AQ9UI33 1791 aa18.25■□□□□ 0.51
SPG7-215ENST00000566682 PIGBQ92521 554 aa18.25■□□□□ 0.51
SPG7-215ENST00000566682 KDM6AO15550 1401 aaPredicted RBP18.24■□□□□ 0.51
SPG7-215ENST00000566682 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
SPG7-215ENST00000566682 TMOD3Q9NYL9 352 aa18.24■□□□□ 0.51
SPG7-215ENST00000566682 LY75O60449 1722 aa18.23■□□□□ 0.51
SPG7-215ENST00000566682 ANP32CO43423 234 aa18.23■□□□□ 0.51
SPG7-215ENST00000566682 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
SPG7-215ENST00000566682 LGR6Q9HBX8 967 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms