RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 IL2RBP14784 551 aa20.53■□□□□ 0.88
SNHG20-204ENST00000566583 GJD4Q96KN9 370 aaPredicted RBP20.53■□□□□ 0.88
SNHG20-204ENST00000566583 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNHG20-204ENST00000566583 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
SNHG20-204ENST00000566583 RAPGEF4Q8WZA2 1011 aa20.53■□□□□ 0.88
SNHG20-204ENST00000566583 QTRT2Q9H974 415 aaKnown RBP20.53■□□□□ 0.88
SNHG20-204ENST00000566583 USP35Q9P2H5 1018 aa20.53■□□□□ 0.88
SNHG20-204ENST00000566583 SCN11AQ9UI33 1791 aa20.52■□□□□ 0.88
SNHG20-204ENST00000566583 BRWD3Q6RI45 1802 aa20.52■□□□□ 0.88
SNHG20-204ENST00000566583 APAF1O14727 1248 aa20.52■□□□□ 0.87
SNHG20-204ENST00000566583 ONECUT3O60422 494 aaPredicted RBP20.52■□□□□ 0.87
SNHG20-204ENST00000566583 TATP17735 454 aaPredicted RBP20.52■□□□□ 0.87
SNHG20-204ENST00000566583 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
SNHG20-204ENST00000566583 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
SNHG20-204ENST00000566583 TMPOP42166 694 aaKnown RBP20.5■□□□□ 0.87
SNHG20-204ENST00000566583 AMOTQ4VCS5 1084 aa20.5■□□□□ 0.87
SNHG20-204ENST00000566583 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
SNHG20-204ENST00000566583 MAPK8IP3Q9UPT6 1336 aa20.49■□□□□ 0.87
SNHG20-204ENST00000566583 TNS2Q63HR2 1409 aa20.49■□□□□ 0.87
SNHG20-204ENST00000566583 NFE2L2Q16236 605 aa20.49■□□□□ 0.87
SNHG20-204ENST00000566583 PLEKHO1Q53GL0 409 aaPredicted RBP20.49■□□□□ 0.87
SNHG20-204ENST00000566583 PHF23Q9BUL5 403 aaPredicted RBP20.49■□□□□ 0.87
SNHG20-204ENST00000566583 CCDC9Q9Y3X0 531 aaKnown RBP20.49■□□□□ 0.87
SNHG20-204ENST00000566583 SIPA1L3O60292 1781 aaPredicted RBP20.47■□□□□ 0.87
SNHG20-204ENST00000566583 GAS2L2Q8NHY3 880 aa20.47■□□□□ 0.87
SNHG20-204ENST00000566583 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
SNHG20-204ENST00000566583 CYP27B1O15528 508 aa20.46■□□□□ 0.87
SNHG20-204ENST00000566583 FAM98CQ17RN3 349 aaKnown RBP20.46■□□□□ 0.87
SNHG20-204ENST00000566583 NGEFQ8N5V2 710 aa20.46■□□□□ 0.87
SNHG20-204ENST00000566583 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
SNHG20-204ENST00000566583 NEFMP07197 916 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 POTEAQ6S8J7 498 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 TRIM35Q9UPQ4 493 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 ZNF521Q96K83 1311 aa20.45■□□□□ 0.86
SNHG20-204ENST00000566583 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
SNHG20-204ENST00000566583 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
SNHG20-204ENST00000566583 RRP7AQ9Y3A4 280 aaKnown RBP20.44■□□□□ 0.86
SNHG20-204ENST00000566583 ITGB4P16144 1822 aa20.44■□□□□ 0.86
SNHG20-204ENST00000566583 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
SNHG20-204ENST00000566583 PHKG2P15735 406 aa20.43■□□□□ 0.86
SNHG20-204ENST00000566583 RIPK4P57078 832 aa20.43■□□□□ 0.86
SNHG20-204ENST00000566583 SENP3-EIF4A1A0A087X0R7 540 aa20.42■□□□□ 0.86
SNHG20-204ENST00000566583 HNRNPUQ00839 825 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNHG20-204ENST00000566583 AKAP4Q5JQC9 854 aa20.42■□□□□ 0.86
SNHG20-204ENST00000566583 PCDH11XQ9BZA7 1347 aa20.42■□□□□ 0.86
SNHG20-204ENST00000566583 PCDH11YQ9BZA8 1340 aa20.42■□□□□ 0.86
SNHG20-204ENST00000566583 SBF2Q86WG5 1849 aa20.42■□□□□ 0.86
SNHG20-204ENST00000566583 KDM6AO15550 1401 aaPredicted RBP20.41■□□□□ 0.86
SNHG20-204ENST00000566583 HTATSF1O43719 755 aaKnown RBP20.41■□□□□ 0.86
SNHG20-204ENST00000566583 NKX1-1Q15270 411 aaPredicted RBP20.41■□□□□ 0.86
SNHG20-204ENST00000566583 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 EXOC5O00471 708 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 DDB1Q16531 1140 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 IFNL2Q8IZJ0 200 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 MRC1P22897 1456 aa20.4■□□□□ 0.86
SNHG20-204ENST00000566583 NEUROD2Q15784 382 aa20.39■□□□□ 0.85
SNHG20-204ENST00000566583 WWC1Q8IX03 1113 aa20.39■□□□□ 0.85
SNHG20-204ENST00000566583 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.85
SNHG20-204ENST00000566583 SEPT12Q8IYM1 358 aa20.38■□□□□ 0.85
SNHG20-204ENST00000566583 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
SNHG20-204ENST00000566583 KAT6BQ8WYB5 2073 aa20.38■□□□□ 0.85
SNHG20-204ENST00000566583 RXRBP28702 533 aa20.37■□□□□ 0.85
SNHG20-204ENST00000566583 MARCH10Q8NA82 808 aaPredicted RBP20.37■□□□□ 0.85
SNHG20-204ENST00000566583 RGS12O14924 1447 aa20.37■□□□□ 0.85
SNHG20-204ENST00000566583 LMOD3Q0VAK6 560 aa20.36■□□□□ 0.85
SNHG20-204ENST00000566583 C1orf141Q5JVX7 400 aa20.36■□□□□ 0.85
SNHG20-204ENST00000566583 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
SNHG20-204ENST00000566583 BCL9O00512 1426 aa20.35■□□□□ 0.85
SNHG20-204ENST00000566583 RNMTO43148 476 aaKnown RBP20.35■□□□□ 0.85
SNHG20-204ENST00000566583 DCTN1Q14203 1278 aa20.35■□□□□ 0.85
SNHG20-204ENST00000566583 DDX54Q8TDD1 881 aaKnown RBP20.35■□□□□ 0.85
SNHG20-204ENST00000566583 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
SNHG20-204ENST00000566583 SALL2Q9Y467 1007 aaPredicted RBP20.35■□□□□ 0.85
SNHG20-204ENST00000566583 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
SNHG20-204ENST00000566583 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
SNHG20-204ENST00000566583 MCM10Q7L590 875 aa20.34■□□□□ 0.85
SNHG20-204ENST00000566583 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
SNHG20-204ENST00000566583 WDR63Q8IWG1 891 aa20.33■□□□□ 0.85
SNHG20-204ENST00000566583 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
SNHG20-204ENST00000566583 THUMPD2Q9BTF0 503 aaKnown RBP20.33■□□□□ 0.85
SNHG20-204ENST00000566583 PAPPAQ13219 1627 aa20.33■□□□□ 0.85
SNHG20-204ENST00000566583 NHSQ6T4R5 1651 aa20.33■□□□□ 0.84
SNHG20-204ENST00000566583 IL16Q14005 1332 aa20.32■□□□□ 0.84
SNHG20-204ENST00000566583 ZNF853P0CG23 659 aa20.3■□□□□ 0.84
SNHG20-204ENST00000566583 RTF1Q92541 710 aaKnown RBP20.3■□□□□ 0.84
SNHG20-204ENST00000566583 UBR2Q8IWV8 1755 aa20.3■□□□□ 0.84
SNHG20-204ENST00000566583 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
SNHG20-204ENST00000566583 A0A0G2JS52 829 aa20.28■□□□□ 0.84
SNHG20-204ENST00000566583 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
SNHG20-204ENST00000566583 MYT1Q01538 1121 aa20.28■□□□□ 0.84
SNHG20-204ENST00000566583 PDE3BQ13370 1112 aa20.28■□□□□ 0.84
SNHG20-204ENST00000566583 TRMT2AQ8IZ69 625 aaKnown RBP20.27■□□□□ 0.84
SNHG20-204ENST00000566583 SLC52A2Q9HAB3 445 aa20.27■□□□□ 0.84
SNHG20-204ENST00000566583 BTAF1O14981 1849 aa20.27■□□□□ 0.84
SNHG20-204ENST00000566583 GOLGA2Q08379 1002 aa20.27■□□□□ 0.83
SNHG20-204ENST00000566583 SLFN5Q08AF3 891 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms