RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 PNISRQ8TF01 805 aaKnown RBP20.36■□□□□ 0.85
KNOP1-203ENST00000565844 NLRP2Q9NX02 1062 aa20.36■□□□□ 0.85
KNOP1-203ENST00000565844 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
KNOP1-203ENST00000565844 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
KNOP1-203ENST00000565844 EYA1Q99502 592 aa20.35■□□□□ 0.85
KNOP1-203ENST00000565844 THRAP3Q9Y2W1 955 aaKnown RBP20.35■□□□□ 0.85
KNOP1-203ENST00000565844 IGSF1Q8N6C5 1336 aa20.35■□□□□ 0.85
KNOP1-203ENST00000565844 APBA3O96018 575 aa20.34■□□□□ 0.85
KNOP1-203ENST00000565844 NBPF6Q5VWK0 638 aa20.34■□□□□ 0.85
KNOP1-203ENST00000565844 NBPF4Q96M43 638 aa20.34■□□□□ 0.85
KNOP1-203ENST00000565844 USHBP1Q8N6Y0 703 aa20.34■□□□□ 0.85
KNOP1-203ENST00000565844 RREB1Q92766 1687 aa20.33■□□□□ 0.84
KNOP1-203ENST00000565844 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
KNOP1-203ENST00000565844 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.84
KNOP1-203ENST00000565844 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
KNOP1-203ENST00000565844 HMOX1P09601 288 aa20.32■□□□□ 0.84
KNOP1-203ENST00000565844 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
KNOP1-203ENST00000565844 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
KNOP1-203ENST00000565844 DISP2A7MBM2 1401 aa20.31■□□□□ 0.84
KNOP1-203ENST00000565844 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
KNOP1-203ENST00000565844 CARD10Q9BWT7 1032 aa20.31■□□□□ 0.84
KNOP1-203ENST00000565844 KDRP35968 1356 aa20.3■□□□□ 0.84
KNOP1-203ENST00000565844 R3HDM1Q15032 1099 aaKnown RBP20.3■□□□□ 0.84
KNOP1-203ENST00000565844 DDB1Q16531 1140 aa20.3■□□□□ 0.84
KNOP1-203ENST00000565844 KAT6BQ8WYB5 2073 aa20.3■□□□□ 0.84
KNOP1-203ENST00000565844 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
KNOP1-203ENST00000565844 RSPH6AQ9H0K4 717 aa20.28■□□□□ 0.84
KNOP1-203ENST00000565844 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
KNOP1-203ENST00000565844 FCHSD2O94868 740 aa20.27■□□□□ 0.84
KNOP1-203ENST00000565844 LRP5O75197 1615 aa20.26■□□□□ 0.83
KNOP1-203ENST00000565844 PRKAR2BP31323 418 aa20.26■□□□□ 0.83
KNOP1-203ENST00000565844 PTF1AQ7RTS3 328 aa20.26■□□□□ 0.83
KNOP1-203ENST00000565844 MEGF6O75095 1541 aa20.26■□□□□ 0.83
KNOP1-203ENST00000565844 CCDC146Q8IYE0 955 aa20.24■□□□□ 0.83
KNOP1-203ENST00000565844 MARCH10Q8NA82 808 aaPredicted RBP20.24■□□□□ 0.83
KNOP1-203ENST00000565844 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
KNOP1-203ENST00000565844 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
KNOP1-203ENST00000565844 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
KNOP1-203ENST00000565844 MAPK8IP3Q9UPT6 1336 aa20.22■□□□□ 0.83
KNOP1-203ENST00000565844 NEFMP07197 916 aa20.21■□□□□ 0.83
KNOP1-203ENST00000565844 IL2RBP14784 551 aa20.21■□□□□ 0.83
KNOP1-203ENST00000565844 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
KNOP1-203ENST00000565844 RUNDC1Q96C34 613 aa20.21■□□□□ 0.83
KNOP1-203ENST00000565844 PLEKHF1Q96S99 279 aa20.21■□□□□ 0.83
KNOP1-203ENST00000565844 SHANK3Q9BYB0 1731 aa20.2■□□□□ 0.83
KNOP1-203ENST00000565844 PHACTR3Q96KR7 559 aa20.2■□□□□ 0.82
KNOP1-203ENST00000565844 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
KNOP1-203ENST00000565844 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
KNOP1-203ENST00000565844 EXOC5O00471 708 aa20.19■□□□□ 0.82
KNOP1-203ENST00000565844 CDCA7Q9BWT1 371 aaPredicted RBP20.19■□□□□ 0.82
KNOP1-203ENST00000565844 TNS2Q63HR2 1409 aa20.19■□□□□ 0.82
KNOP1-203ENST00000565844 RGPD3A6NKT7 1758 aaPredicted RBP20.18■□□□□ 0.82
KNOP1-203ENST00000565844 RGPD4Q7Z3J3 1758 aa20.18■□□□□ 0.82
KNOP1-203ENST00000565844 PLEKHO1Q53GL0 409 aaPredicted RBP20.16■□□□□ 0.82
KNOP1-203ENST00000565844 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
KNOP1-203ENST00000565844 NHSQ6T4R5 1651 aa20.15■□□□□ 0.82
KNOP1-203ENST00000565844 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
KNOP1-203ENST00000565844 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
KNOP1-203ENST00000565844 BTAF1O14981 1849 aa20.14■□□□□ 0.81
KNOP1-203ENST00000565844 VIRMAQ69YN4 1812 aaKnown RBP20.14■□□□□ 0.81
KNOP1-203ENST00000565844 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
KNOP1-203ENST00000565844 APAF1O14727 1248 aa20.14■□□□□ 0.81
KNOP1-203ENST00000565844 KCNQ2O43526 872 aa20.14■□□□□ 0.81
KNOP1-203ENST00000565844 MTHFSDQ2M296 383 aaKnown RBP20.14■□□□□ 0.81
KNOP1-203ENST00000565844 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
KNOP1-203ENST00000565844 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.14■□□□□ 0.815e-7■■■■□ 20.9
KNOP1-203ENST00000565844 NBPF14Q5TI25 921 aa20.13■□□□□ 0.81
KNOP1-203ENST00000565844 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
KNOP1-203ENST00000565844 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
KNOP1-203ENST00000565844 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
KNOP1-203ENST00000565844 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
KNOP1-203ENST00000565844 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
KNOP1-203ENST00000565844 TMPOP42166 694 aaKnown RBP20.11■□□□□ 0.81
KNOP1-203ENST00000565844 ANO8Q9HCE9 1232 aaPredicted RBP20.11■□□□□ 0.81
KNOP1-203ENST00000565844 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
KNOP1-203ENST00000565844 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
KNOP1-203ENST00000565844 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
KNOP1-203ENST00000565844 BCL9O00512 1426 aa20.09■□□□□ 0.81
KNOP1-203ENST00000565844 MAP3K5Q99683 1374 aa20.09■□□□□ 0.81
KNOP1-203ENST00000565844 PLSCR1O15162 318 aa20.09■□□□□ 0.81
KNOP1-203ENST00000565844 C1orf141Q5JVX7 400 aa20.09■□□□□ 0.81
KNOP1-203ENST00000565844 RIPK4P57078 832 aa20.08■□□□□ 0.81
KNOP1-203ENST00000565844 HNRNPUQ00839 825 aaKnown RBP eCLIP20.08■□□□□ 0.81
KNOP1-203ENST00000565844 PROM2Q8N271 834 aa20.08■□□□□ 0.81
KNOP1-203ENST00000565844 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
KNOP1-203ENST00000565844 DOT1LQ8TEK3 1739 aa20.08■□□□□ 0.81
KNOP1-203ENST00000565844 SCN11AQ9UI33 1791 aa20.08■□□□□ 0.8
KNOP1-203ENST00000565844 CYP27B1O15528 508 aa20.07■□□□□ 0.8
KNOP1-203ENST00000565844 PHKG2P15735 406 aa20.07■□□□□ 0.8
KNOP1-203ENST00000565844 AKAP4Q5JQC9 854 aa20.07■□□□□ 0.8
KNOP1-203ENST00000565844 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
KNOP1-203ENST00000565844 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
KNOP1-203ENST00000565844 SALL2Q9Y467 1007 aaPredicted RBP20.07■□□□□ 0.8
KNOP1-203ENST00000565844 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
KNOP1-203ENST00000565844 ADAMTS7Q9UKP4 1686 aa20.06■□□□□ 0.8
KNOP1-203ENST00000565844 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
KNOP1-203ENST00000565844 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
KNOP1-203ENST00000565844 TXNRD1Q16881 649 aa20.05■□□□□ 0.8
KNOP1-203ENST00000565844 PDGFDQ9GZP0 370 aaPredicted RBP20.05■□□□□ 0.8
KNOP1-203ENST00000565844 TOGARAM1Q9Y4F4 1720 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms