RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 BCL9O00512 1426 aa18.65■□□□□ 0.58
PKD1-228ENST00000564865 KCNQ2O43526 872 aa18.64■□□□□ 0.57
PKD1-228ENST00000564865 MTHFSP49914 203 aa18.64■□□□□ 0.57
PKD1-228ENST00000564865 NPC1L1Q9UHC9 1359 aa18.63■□□□□ 0.57
PKD1-228ENST00000564865 SBF2Q86WG5 1849 aa18.63■□□□□ 0.57
PKD1-228ENST00000564865 NCAPD2Q15021 1401 aa18.6■□□□□ 0.57
PKD1-228ENST00000564865 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
PKD1-228ENST00000564865 PLSCR1O15162 318 aa18.59■□□□□ 0.57
PKD1-228ENST00000564865 SYTL4Q96C24 671 aaPredicted RBP18.59■□□□□ 0.57
PKD1-228ENST00000564865 IGSF1Q8N6C5 1336 aa18.58■□□□□ 0.57
PKD1-228ENST00000564865 PCDH11XQ9BZA7 1347 aa18.58■□□□□ 0.57
PKD1-228ENST00000564865 PCDH11YQ9BZA8 1340 aa18.58■□□□□ 0.57
PKD1-228ENST00000564865 IL13P35225 146 aa18.58■□□□□ 0.56
PKD1-228ENST00000564865 SPG7Q9UQ90 795 aa18.58■□□□□ 0.56
PKD1-228ENST00000564865 PSDA5PKW4 1024 aaPredicted RBP18.57■□□□□ 0.56
PKD1-228ENST00000564865 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
PKD1-228ENST00000564865 SHANK3Q9BYB0 1731 aa18.57■□□□□ 0.56
PKD1-228ENST00000564865 CYP27B1O15528 508 aa18.56■□□□□ 0.56
PKD1-228ENST00000564865 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
PKD1-228ENST00000564865 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
PKD1-228ENST00000564865 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
PKD1-228ENST00000564865 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
PKD1-228ENST00000564865 AEBP1Q8IUX7 1158 aa18.55■□□□□ 0.56
PKD1-228ENST00000564865 R3HDM1Q15032 1099 aaKnown RBP18.54■□□□□ 0.56
PKD1-228ENST00000564865 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
PKD1-228ENST00000564865 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
PKD1-228ENST00000564865 PROM2Q8N271 834 aa18.53■□□□□ 0.56
PKD1-228ENST00000564865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.53■□□□□ 0.56
PKD1-228ENST00000564865 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
PKD1-228ENST00000564865 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
PKD1-228ENST00000564865 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
PKD1-228ENST00000564865 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.55
PKD1-228ENST00000564865 RREB1Q92766 1687 aa18.51■□□□□ 0.55
PKD1-228ENST00000564865 HMOX1P09601 288 aa18.51■□□□□ 0.55
PKD1-228ENST00000564865 DOT1LQ8TEK3 1739 aa18.51■□□□□ 0.55
PKD1-228ENST00000564865 U2SURPO15042 1029 aaKnown RBP18.5■□□□□ 0.55
PKD1-228ENST00000564865 PHKG2P15735 406 aa18.5■□□□□ 0.55
PKD1-228ENST00000564865 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
PKD1-228ENST00000564865 CFAP53Q96M91 514 aa18.5■□□□□ 0.55
PKD1-228ENST00000564865 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
PKD1-228ENST00000564865 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
PKD1-228ENST00000564865 BTAF1O14981 1849 aa18.49■□□□□ 0.55
PKD1-228ENST00000564865 NKX1-1Q15270 411 aaPredicted RBP18.49■□□□□ 0.55
PKD1-228ENST00000564865 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
PKD1-228ENST00000564865 RGPD3A6NKT7 1758 aaPredicted RBP18.48■□□□□ 0.55
PKD1-228ENST00000564865 RGPD4Q7Z3J3 1758 aa18.48■□□□□ 0.55
PKD1-228ENST00000564865 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
PKD1-228ENST00000564865 KDRP35968 1356 aa18.47■□□□□ 0.55
PKD1-228ENST00000564865 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
PKD1-228ENST00000564865 PLEKHG2Q9H7P9 1386 aa18.46■□□□□ 0.55
PKD1-228ENST00000564865 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
PKD1-228ENST00000564865 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
PKD1-228ENST00000564865 HSP90AB1P08238 724 aaKnown RBP18.44■□□□□ 0.54
PKD1-228ENST00000564865 STK32BQ9NY57 414 aa18.44■□□□□ 0.54
PKD1-228ENST00000564865 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
PKD1-228ENST00000564865 KCNQ4P56696 695 aa18.43■□□□□ 0.54
PKD1-228ENST00000564865 PIGBQ92521 554 aa18.43■□□□□ 0.54
PKD1-228ENST00000564865 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
PKD1-228ENST00000564865 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
PKD1-228ENST00000564865 TOGARAM1Q9Y4F4 1720 aa18.43■□□□□ 0.54
PKD1-228ENST00000564865 SLC27A3Q5K4L6 730 aa18.42■□□□□ 0.54
PKD1-228ENST00000564865 DCAF5Q96JK2 942 aa18.42■□□□□ 0.54
PKD1-228ENST00000564865 SLC15A2Q16348 729 aa18.41■□□□□ 0.54
PKD1-228ENST00000564865 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
PKD1-228ENST00000564865 U2AF1L5P0DN76 240 aaPredicted RBP18.4■□□□□ 0.54
PKD1-228ENST00000564865 U2AF1Q01081 240 aaKnown RBP eCLIP18.4■□□□□ 0.54
PKD1-228ENST00000564865 RALBP1Q15311 655 aa18.4■□□□□ 0.54
PKD1-228ENST00000564865 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
PKD1-228ENST00000564865 ERVV-2B6SEH9 535 aa18.39■□□□□ 0.53
PKD1-228ENST00000564865 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.53
PKD1-228ENST00000564865 SMARCC1Q92922 1105 aaPredicted RBP18.39■□□□□ 0.53
PKD1-228ENST00000564865 ITGB4P16144 1822 aa18.39■□□□□ 0.53
PKD1-228ENST00000564865 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
PKD1-228ENST00000564865 ZNF316A6NFI3 1004 aaPredicted RBP18.38■□□□□ 0.53
PKD1-228ENST00000564865 CABP4P57796 275 aa18.38■□□□□ 0.53
PKD1-228ENST00000564865 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
PKD1-228ENST00000564865 ASAP1Q9ULH1 1129 aa18.37■□□□□ 0.53
PKD1-228ENST00000564865 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
PKD1-228ENST00000564865 LY75O60449 1722 aa18.36■□□□□ 0.53
PKD1-228ENST00000564865 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
PKD1-228ENST00000564865 PDGFDQ9GZP0 370 aaPredicted RBP18.36■□□□□ 0.53
PKD1-228ENST00000564865 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
PKD1-228ENST00000564865 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
PKD1-228ENST00000564865 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
PKD1-228ENST00000564865 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
PKD1-228ENST00000564865 AKT1S1Q96B36 256 aa18.34■□□□□ 0.53
PKD1-228ENST00000564865 PHACTR3Q96KR7 559 aa18.34■□□□□ 0.53
PKD1-228ENST00000564865 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
PKD1-228ENST00000564865 RNMTO43148 476 aaKnown RBP18.33■□□□□ 0.52
PKD1-228ENST00000564865 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
PKD1-228ENST00000564865 TFCP2L1Q9NZI6 479 aa18.33■□□□□ 0.52
PKD1-228ENST00000564865 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
PKD1-228ENST00000564865 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
PKD1-228ENST00000564865 FCHSD2O94868 740 aa18.32■□□□□ 0.52
PKD1-228ENST00000564865 SIK1P57059 783 aa18.32■□□□□ 0.52
PKD1-228ENST00000564865 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
PKD1-228ENST00000564865 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
PKD1-228ENST00000564865 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
PKD1-228ENST00000564865 SPON1Q9HCB6 807 aa18.31■□□□□ 0.52
PKD1-228ENST00000564865 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms