RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 IBTKQ9P2D0 1353 aaPredicted RBP25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 CEP85Q6P2H3 762 aa25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.01■■□□□ 1.595e-7■■□□□ 13.6
MAP1LC3B-206ENST00000564844 TRIM6-TRIM34B2RNG4 842 aa25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 CWC22Q9HCG8 908 aaKnown RBP25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 IFT57Q9NWB7 429 aa25.01■■□□□ 1.59
MAP1LC3B-206ENST00000564844 EFCAB6Q5THR3 1501 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 AEBP1Q8IUX7 1158 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 TTC12Q9H892 705 aaPredicted RBP25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ANO2Q9NQ90 1003 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 DEPDC5O75140 1603 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 NECTIN2Q92692 538 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 MYO3AQ8NEV4 1616 aa25■■□□□ 1.59
MAP1LC3B-206ENST00000564844 CCDC39Q9UFE4 941 aa24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 USP25Q9UHP3 1055 aa24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 A0A0U1RQG5 324 aaPredicted RBP24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 MROH1Q8NDA8 1641 aa24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ERC2O15083 957 aa24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 REC8O95072 547 aa24.99■■□□□ 1.59
MAP1LC3B-206ENST00000564844 MED14O60244 1454 aa24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ANKRD44Q8N8A2 993 aa24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 CFAP44Q96MT7 982 aa24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 BCL11BQ9C0K0 894 aaPredicted RBP24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 LRRC7Q96NW7 1537 aa24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 VWDEQ8N2E2 1590 aa24.98■■□□□ 1.59
MAP1LC3B-206ENST00000564844 TSPY26PQ9H489 355 aa24.97■■□□□ 1.59
MAP1LC3B-206ENST00000564844 MAP4K4O95819 1239 aaPredicted RBP24.96■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ZNF428Q96B54 188 aa24.96■■□□□ 1.59
MAP1LC3B-206ENST00000564844 PRDM4Q9UKN5 801 aa24.96■■□□□ 1.59
MAP1LC3B-206ENST00000564844 ADGRB3O60242 1522 aa24.96■■□□□ 1.59
MAP1LC3B-206ENST00000564844 GLI2P10070 1586 aa24.96■■□□□ 1.59
MAP1LC3B-206ENST00000564844 SLC4A2P04920 1241 aa24.95■■□□□ 1.59
MAP1LC3B-206ENST00000564844 BRPF1P55201 1214 aaPredicted RBP24.95■■□□□ 1.58
MAP1LC3B-206ENST00000564844 HS1BP3Q53T59 392 aa24.95■■□□□ 1.58
MAP1LC3B-206ENST00000564844 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
MAP1LC3B-206ENST00000564844 MSH6P52701 1360 aa24.94■■□□□ 1.58
MAP1LC3B-206ENST00000564844 SASS6Q6UVJ0 657 aa24.94■■□□□ 1.58
MAP1LC3B-206ENST00000564844 RPGRIP1LQ68CZ1 1315 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 ZNF853P0CG23 659 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 CBX1P83916 185 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 CSPP1Q1MSJ5 1256 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 G2E3Q7L622 706 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 IFT172Q9UG01 1749 aa24.93■■□□□ 1.58
MAP1LC3B-206ENST00000564844 IL13P35225 146 aa24.92■■□□□ 1.58
MAP1LC3B-206ENST00000564844 KIAA2012Q0VF49 1180 aa24.92■■□□□ 1.58
MAP1LC3B-206ENST00000564844 CYB5RLQ6IPT4 315 aa24.92■■□□□ 1.58
MAP1LC3B-206ENST00000564844 USP48Q86UV5 1035 aa24.92■■□□□ 1.58
MAP1LC3B-206ENST00000564844 FAM135BQ49AJ0 1406 aa24.91■■□□□ 1.58
MAP1LC3B-206ENST00000564844 PDE1AP54750 535 aa24.91■■□□□ 1.58
MAP1LC3B-206ENST00000564844 SULT6B1Q6IMI4 303 aa24.91■■□□□ 1.58
MAP1LC3B-206ENST00000564844 HCLS1P14317 486 aaPredicted RBP24.9■■□□□ 1.58
MAP1LC3B-206ENST00000564844 ASXL2Q76L83 1435 aa24.9■■□□□ 1.58
MAP1LC3B-206ENST00000564844 PNPLA6Q8IY17 1366 aa24.9■■□□□ 1.58
MAP1LC3B-206ENST00000564844 DYNC1I1O14576 645 aa24.89■■□□□ 1.58
MAP1LC3B-206ENST00000564844 ZC3H13Q5T200 1668 aaKnown RBP24.89■■□□□ 1.58
MAP1LC3B-206ENST00000564844 PIK3R4Q99570 1358 aa24.89■■□□□ 1.58
MAP1LC3B-206ENST00000564844 CHMP3Q9Y3E7 222 aa24.89■■□□□ 1.58
MAP1LC3B-206ENST00000564844 CAMSAP1Q5T5Y3 1602 aa24.89■■□□□ 1.57
MAP1LC3B-206ENST00000564844 RPAP2Q8IXW5 612 aaPredicted RBP24.89■■□□□ 1.57
MAP1LC3B-206ENST00000564844 PUS7Q96PZ0 661 aaKnown RBP24.89■■□□□ 1.57
MAP1LC3B-206ENST00000564844 IGSF3O75054 1194 aa24.88■■□□□ 1.57
MAP1LC3B-206ENST00000564844 MBD3O95983 291 aa24.88■■□□□ 1.57
MAP1LC3B-206ENST00000564844 BRD1O95696 1058 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 UNC5CLQ8IV45 518 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 CD163L1Q9NR16 1453 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 INO80Q9ULG1 1556 aaPredicted RBP24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 TERF1P54274 439 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 IL1RAPL2Q9NP60 686 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 CNPY2Q9Y2B0 182 aa24.87■■□□□ 1.57
MAP1LC3B-206ENST00000564844 SPC24Q8NBT2 197 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 MAP7D2Q96T17 732 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 RTL1A6NKG5 1358 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 SPDYE4A6NLX3 237 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 ADCY5O95622 1261 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 DDX54Q8TDD1 881 aaKnown RBP24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 IL25Q9H293 177 aa24.86■■□□□ 1.57
MAP1LC3B-206ENST00000564844 TXNDC2Q86VQ3 553 aa24.85■■□□□ 1.57
MAP1LC3B-206ENST00000564844 YTHDC2Q9H6S0 1430 aaKnown RBP24.85■■□□□ 1.57
MAP1LC3B-206ENST00000564844 USP32Q8NFA0 1604 aa24.85■■□□□ 1.57
MAP1LC3B-206ENST00000564844 FIBPO43427 364 aa24.85■■□□□ 1.57
MAP1LC3B-206ENST00000564844 PPLO60437 1756 aa24.85■■□□□ 1.57
MAP1LC3B-206ENST00000564844 FOXO3O43524 673 aa24.84■■□□□ 1.57
MAP1LC3B-206ENST00000564844 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
MAP1LC3B-206ENST00000564844 ATP10DQ9P241 1426 aa24.84■■□□□ 1.57
MAP1LC3B-206ENST00000564844 ESYT1Q9BSJ8 1104 aa24.84■■□□□ 1.57
MAP1LC3B-206ENST00000564844 CPA1P15085 419 aa24.83■■□□□ 1.57
MAP1LC3B-206ENST00000564844 NOLC1Q14978 699 aaKnown RBP eCLIP24.83■■□□□ 1.57
MAP1LC3B-206ENST00000564844 RIMS2Q9UQ26 1411 aa24.82■■□□□ 1.56
MAP1LC3B-206ENST00000564844 GIMAP6Q6P9H5 292 aa24.82■■□□□ 1.56
MAP1LC3B-206ENST00000564844 ARHGEF28Q8N1W1 1705 aaKnown RBP24.81■■□□□ 1.56
MAP1LC3B-206ENST00000564844 PNMA6EA0A0J9YXQ4 647 aa24.81■■□□□ 1.56
MAP1LC3B-206ENST00000564844 NUTM1Q86Y26 1132 aa24.81■■□□□ 1.56
MAP1LC3B-206ENST00000564844 LMOD3Q0VAK6 560 aa24.8■■□□□ 1.56
MAP1LC3B-206ENST00000564844 COG3Q96JB2 828 aa24.8■■□□□ 1.56
MAP1LC3B-206ENST00000564844 SYAP1Q96A49 352 aaPredicted RBP24.8■■□□□ 1.56
MAP1LC3B-206ENST00000564844 MCM5P33992 734 aa24.8■■□□□ 1.56
MAP1LC3B-206ENST00000564844 ZNF710Q8N1W2 664 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms