RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	IGHD	P01880	384 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	AKAP17A	Q02040	695 aa	Known RBP	5	□□□□□ -1.61
MACF1-231	ENST00000564288	MAP3K11	Q16584	847 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	PPFIBP1	Q86W92	1011 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	PANK1	Q8TE04	598 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	DDX41	Q9UJV9	622 aa	Known RBP	5	□□□□□ -1.61
MACF1-231	ENST00000564288	OPA1	O60313	960 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	ERLIN2	O94905	339 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	RBBP5	Q15291	538 aa	Known RBP	5	□□□□□ -1.61
MACF1-231	ENST00000564288	IFT140	Q96RY7	1462 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	CAPN2	P17655	700 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	ICE2	Q659A1	982 aa		5	□□□□□ -1.61
MACF1-231	ENST00000564288	ZBTB7C	A1YPR0	619 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	SMC2	O95347	1197 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ANTXR1	Q9H6X2	564 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	BRD3	Q15059	726 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	RPGRIP1L	Q68CZ1	1315 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	HIP1	O00291	1037 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	MPHOSPH10	O00566	681 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ERC1	Q8IUD2	1116 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	NCAPG	Q9BPX3	1015 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ITSN2	Q9NZM3	1697 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	RBSN	Q9H1K0	784 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	KDM5D	Q9BY66	1539 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ARHGAP25	P42331	645 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	NBPF8	Q3BBV2	869 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	CRACR2A	Q9BSW2	395 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	FANCD2	Q9BXW9	1451 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	CFAP43	Q8NDM7	1665 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	KIF5C	O60282	957 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	CCDC146	Q8IYE0	955 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	RERE	Q9P2R6	1566 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	GAPVD1	Q14C86	1478 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	TRO	Q12816	1431 aa	Predicted RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	IMPACT	Q9P2X3	320 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	SPAG9	O60271	1321 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	MIPOL1	Q8TD10	442 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	EXOC4	Q96A65	974 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	NCOA2	Q15596	1464 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ANAPC15	P60006	121 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	TPRN	Q4KMQ1	711 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	DHX37	Q8IY37	1157 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	TNMD	Q9H2S6	317 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	HNRNPH2	P55795	449 aa	Known RBP	4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	ANKRD18B	A2A2Z9	1011 aa		4.99	□□□□□ -1.61
MACF1-231	ENST00000564288	GPR161	Q8N6U8	529 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SPC24	Q8NBT2	197 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	C8orf34	Q49A92	452 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SH2D4B	Q5SQS7	431 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	POTED	Q86YR6	584 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ARHGAP45	Q92619	1136 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	CEP83	Q9Y592	693 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SYCE3	A1L190	88 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SFPQ	P23246	707 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	LIMCH1	Q9UPQ0	1083 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	EFCAB2	Q5VUJ9	269 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	KRBA2	Q6ZNG9	492 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	CEP112	Q8N8E3	955 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SENP3-EIF4A1	A0A087X0R7	540 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ARMC2	Q8NEN0	867 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	RPRD2	Q5VT52	1461 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	LMAN1	P49257	510 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ANKRD18A	Q8IVF6	992 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	RUFY1	Q96T51	708 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	TMEM51	Q9NW97	253 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	MYO1B	O43795	1136 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ZSCAN26	Q16670	478 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SMARCE1	Q969G3	411 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	JMY	Q8N9B5	988 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SPTLC3	Q9NUV7	552 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	VEZT	Q9HBM0	779 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	TCOF1	Q13428	1488 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	KRT85	P78386	507 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	DDX19A	Q9NUU7	478 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	SMC1A	Q14683	1233 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ARAP1	Q96P48	1450 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	PRDM2	Q13029	1718 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	NUCB1	Q02818	461 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	MVP	Q14764	893 aa	Known RBP	4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	MPHOSPH8	Q99549	860 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ASXL2	Q76L83	1435 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	IL16	Q14005	1332 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	ZNF165	P49910	485 aa		4.98	□□□□□ -1.61
MACF1-231	ENST00000564288	GBP2	P32456	591 aa	Predicted RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	CEP89	Q96ST8	783 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	LRRFIP2	Q9Y608	721 aa	Known RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	MRVI1	Q9Y6F6	885 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	RARS	P54136	660 aa	Known RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	OS9	Q13438	667 aa	Predicted RBP	4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	CCDC148	Q8NFR7	591 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	SBNO2	Q9Y2G9	1366 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	NEXN	Q0ZGT2	675 aa		4.97	□□□□□ -1.61
MACF1-231	ENST00000564288	DACH1	Q9UI36	760 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms