RNA–Protein interactions for RNA: ENST00000564070.1

SPSB3-205, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 714 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-205ENST00000564070 NBPF14Q5TI25 921 aa21.83■■□□□ 1.09
SPSB3-205ENST00000564070 RAPGEF4Q8WZA2 1011 aa21.82■■□□□ 1.08
SPSB3-205ENST00000564070 BCL11BQ9C0K0 894 aaPredicted RBP21.82■■□□□ 1.08
SPSB3-205ENST00000564070 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
SPSB3-205ENST00000564070 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
SPSB3-205ENST00000564070 PROM2Q8N271 834 aa21.81■■□□□ 1.08
SPSB3-205ENST00000564070 PLSCR1O15162 318 aa21.8■■□□□ 1.08
SPSB3-205ENST00000564070 EIF4A2Q14240 407 aaKnown RBP21.8■■□□□ 1.08
SPSB3-205ENST00000564070 ANO8Q9HCE9 1232 aaPredicted RBP21.8■■□□□ 1.08
SPSB3-205ENST00000564070 SHANK3Q9BYB0 1731 aa21.8■■□□□ 1.08
SPSB3-205ENST00000564070 TATP17735 454 aaPredicted RBP21.79■■□□□ 1.08
SPSB3-205ENST00000564070 ZCRB1Q8TBF4 217 aaKnown RBP21.79■■□□□ 1.08
SPSB3-205ENST00000564070 NHSQ6T4R5 1651 aa21.79■■□□□ 1.08
SPSB3-205ENST00000564070 KCNQ2O43526 872 aa21.78■■□□□ 1.08
SPSB3-205ENST00000564070 EYA1Q99502 592 aa21.78■■□□□ 1.08
SPSB3-205ENST00000564070 RGPD3A6NKT7 1758 aaPredicted RBP21.77■■□□□ 1.08
SPSB3-205ENST00000564070 RGPD4Q7Z3J3 1758 aa21.77■■□□□ 1.08
SPSB3-205ENST00000564070 DDX54Q8TDD1 881 aaKnown RBP21.76■■□□□ 1.07
SPSB3-205ENST00000564070 PDGFDQ9GZP0 370 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-205ENST00000564070 PKD1L3Q7Z443 1732 aa21.75■■□□□ 1.07
SPSB3-205ENST00000564070 ACSBG1Q96GR2 724 aa21.75■■□□□ 1.07
SPSB3-205ENST00000564070 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
SPSB3-205ENST00000564070 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
SPSB3-205ENST00000564070 MTHFSP49914 203 aa21.73■■□□□ 1.07
SPSB3-205ENST00000564070 PCDH11XQ9BZA7 1347 aa21.73■■□□□ 1.07
SPSB3-205ENST00000564070 PCDH11YQ9BZA8 1340 aa21.73■■□□□ 1.07
SPSB3-205ENST00000564070 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
SPSB3-205ENST00000564070 DOT1LQ8TEK3 1739 aa21.7■■□□□ 1.06
SPSB3-205ENST00000564070 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
SPSB3-205ENST00000564070 SPON1Q9HCB6 807 aa21.7■■□□□ 1.06
SPSB3-205ENST00000564070 IL13P35225 146 aa21.69■■□□□ 1.06
SPSB3-205ENST00000564070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.69■■□□□ 1.06
SPSB3-205ENST00000564070 SPG7Q9UQ90 795 aa21.69■■□□□ 1.06
SPSB3-205ENST00000564070 BTAF1O14981 1849 aa21.67■■□□□ 1.06
SPSB3-205ENST00000564070 KDRP35968 1356 aa21.66■■□□□ 1.06
SPSB3-205ENST00000564070 CYP27B1O15528 508 aa21.66■■□□□ 1.06
SPSB3-205ENST00000564070 ZBTB7AO95365 584 aa21.66■■□□□ 1.06
SPSB3-205ENST00000564070 CASZ1Q86V15 1759 aa21.66■■□□□ 1.06
SPSB3-205ENST00000564070 PPP1R1BQ9UD71 204 aaPredicted RBP21.65■■□□□ 1.06
SPSB3-205ENST00000564070 COL3A1P02461 1466 aaPredicted RBP21.64■■□□□ 1.06
SPSB3-205ENST00000564070 DIAPH1O60610 1272 aaKnown RBP21.64■■□□□ 1.05
SPSB3-205ENST00000564070 PRIM1P49642 420 aaKnown RBP21.63■■□□□ 1.05
SPSB3-205ENST00000564070 SULT6B1Q6IMI4 303 aa21.63■■□□□ 1.05
SPSB3-205ENST00000564070 STK32BQ9NY57 414 aa21.63■■□□□ 1.05
SPSB3-205ENST00000564070 ATF5Q9Y2D1 282 aaPredicted RBP21.63■■□□□ 1.05
SPSB3-205ENST00000564070 NKX1-1Q15270 411 aaPredicted RBP21.62■■□□□ 1.05
SPSB3-205ENST00000564070 SLC15A2Q16348 729 aa21.62■■□□□ 1.05
SPSB3-205ENST00000564070 AEBP1Q8IUX7 1158 aa21.62■■□□□ 1.05
SPSB3-205ENST00000564070 SYTL4Q96C24 671 aaPredicted RBP21.62■■□□□ 1.05
SPSB3-205ENST00000564070 TOGARAM1Q9Y4F4 1720 aa21.61■■□□□ 1.05
SPSB3-205ENST00000564070 PHKG2P15735 406 aa21.6■■□□□ 1.05
SPSB3-205ENST00000564070 PPP2R1AP30153 589 aa21.6■■□□□ 1.05
SPSB3-205ENST00000564070 AMOTQ4VCS5 1084 aa21.6■■□□□ 1.05
SPSB3-205ENST00000564070 PLEKHO1Q53GL0 409 aaPredicted RBP21.6■■□□□ 1.05
SPSB3-205ENST00000564070 IFNL2Q8IZJ0 200 aa21.6■■□□□ 1.05
SPSB3-205ENST00000564070 PTGER2P43116 358 aa21.59■■□□□ 1.05
SPSB3-205ENST00000564070 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
SPSB3-205ENST00000564070 LRRC4BQ9NT99 713 aa21.59■■□□□ 1.05
SPSB3-205ENST00000564070 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.05
SPSB3-205ENST00000564070 KAT6BQ8WYB5 2073 aa21.58■■□□□ 1.05
SPSB3-205ENST00000564070 ZNF827Q17R98 1081 aa21.57■■□□□ 1.04
SPSB3-205ENST00000564070 KCNQ4P56696 695 aa21.56■■□□□ 1.04
SPSB3-205ENST00000564070 ITGB4P16144 1822 aa21.55■■□□□ 1.04
SPSB3-205ENST00000564070 LY75O60449 1722 aa21.55■■□□□ 1.04
SPSB3-205ENST00000564070 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
SPSB3-205ENST00000564070 HSP90AB1P08238 724 aaKnown RBP21.54■■□□□ 1.04
SPSB3-205ENST00000564070 HMOX1P09601 288 aa21.54■■□□□ 1.04
SPSB3-205ENST00000564070 ZNF530Q6P9A1 599 aaPredicted RBP21.54■■□□□ 1.04
SPSB3-205ENST00000564070 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
SPSB3-205ENST00000564070 SLC27A3Q5K4L6 730 aa21.53■■□□□ 1.04
SPSB3-205ENST00000564070 MPRIPQ6WCQ1 1025 aa21.53■■□□□ 1.04
SPSB3-205ENST00000564070 C1orf141Q5JVX7 400 aa21.52■■□□□ 1.04
SPSB3-205ENST00000564070 DCAF5Q96JK2 942 aa21.52■■□□□ 1.04
SPSB3-205ENST00000564070 RALBP1Q15311 655 aa21.51■■□□□ 1.03
SPSB3-205ENST00000564070 SGIP1Q9BQI5 828 aa21.51■■□□□ 1.03
SPSB3-205ENST00000564070 NUDCQ9Y266 331 aa21.51■■□□□ 1.03
SPSB3-205ENST00000564070 UTRNP46939 3433 aa21.51■■□□□ 1.03
SPSB3-205ENST00000564070 MTFR1LQ9H019 292 aa21.5■■□□□ 1.03
SPSB3-205ENST00000564070 TMOD3Q9NYL9 352 aa21.5■■□□□ 1.03
SPSB3-205ENST00000564070 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
SPSB3-205ENST00000564070 PIGBQ92521 554 aa21.49■■□□□ 1.03
SPSB3-205ENST00000564070 AKT1S1Q96B36 256 aa21.49■■□□□ 1.03
SPSB3-205ENST00000564070 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
SPSB3-205ENST00000564070 ERVV-2B6SEH9 535 aa21.48■■□□□ 1.03
SPSB3-205ENST00000564070 YY1P25490 414 aa21.48■■□□□ 1.03
SPSB3-205ENST00000564070 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
SPSB3-205ENST00000564070 SMARCC1Q92922 1105 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-205ENST00000564070 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-205ENST00000564070 CCNL1Q9UK58 526 aaPredicted RBP21.46■■□□□ 1.03
SPSB3-205ENST00000564070 MTHFSDQ2M296 383 aaKnown RBP21.45■■□□□ 1.02
SPSB3-205ENST00000564070 SYT17Q9BSW7 474 aa21.45■■□□□ 1.02
SPSB3-205ENST00000564070 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
SPSB3-205ENST00000564070 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
SPSB3-205ENST00000564070 RSPH6AQ9H0K4 717 aa21.44■■□□□ 1.02
SPSB3-205ENST00000564070 U2AF1L5P0DN76 240 aaPredicted RBP21.43■■□□□ 1.02
SPSB3-205ENST00000564070 U2AF1Q01081 240 aaKnown RBP eCLIP21.43■■□□□ 1.02
SPSB3-205ENST00000564070 PNPLA7Q6ZV29 1317 aa21.43■■□□□ 1.02
SPSB3-205ENST00000564070 ZNF316A6NFI3 1004 aaPredicted RBP21.42■■□□□ 1.02
SPSB3-205ENST00000564070 C5P01031 1676 aa21.42■■□□□ 1.02
SPSB3-205ENST00000564070 CABP4P57796 275 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms