RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
HDGFL3-204ENST00000563790 C5P01031 1676 aa16.66■□□□□ 0.26
HDGFL3-204ENST00000563790 VEGFBP49765 207 aa16.66■□□□□ 0.26
HDGFL3-204ENST00000563790 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
HDGFL3-204ENST00000563790 VEGFAP15692 232 aaPredicted RBP16.65■□□□□ 0.26
HDGFL3-204ENST00000563790 KCNQ4P56696 695 aa16.65■□□□□ 0.26
HDGFL3-204ENST00000563790 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
HDGFL3-204ENST00000563790 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
HDGFL3-204ENST00000563790 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
HDGFL3-204ENST00000563790 UBR3Q6ZT12 1888 aa16.62■□□□□ 0.25
HDGFL3-204ENST00000563790 ADGRF5Q8IZF2 1346 aa16.62■□□□□ 0.25
HDGFL3-204ENST00000563790 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
HDGFL3-204ENST00000563790 MCOLN1Q9GZU1 580 aa16.61■□□□□ 0.25
HDGFL3-204ENST00000563790 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
HDGFL3-204ENST00000563790 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
HDGFL3-204ENST00000563790 GCP02774 474 aa16.6■□□□□ 0.25
HDGFL3-204ENST00000563790 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 SAFB2Q14151 953 aaKnown RBP eCLIP16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 CARD10Q9BWT7 1032 aa16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 RNF181Q9P0P0 153 aa16.59■□□□□ 0.25
HDGFL3-204ENST00000563790 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
HDGFL3-204ENST00000563790 ZC3H4Q9UPT8 1303 aaKnown RBP16.58■□□□□ 0.24
HDGFL3-204ENST00000563790 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
HDGFL3-204ENST00000563790 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
HDGFL3-204ENST00000563790 FLAD1Q8NFF5 587 aa16.57■□□□□ 0.24
HDGFL3-204ENST00000563790 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
HDGFL3-204ENST00000563790 PIK3C2GO75747 1445 aa16.56■□□□□ 0.24
HDGFL3-204ENST00000563790 DOT1LQ8TEK3 1739 aa16.56■□□□□ 0.24
HDGFL3-204ENST00000563790 PPIP5K1Q6PFW1 1433 aa16.55■□□□□ 0.24
HDGFL3-204ENST00000563790 CEP290O15078 2479 aa16.55■□□□□ 0.24
HDGFL3-204ENST00000563790 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
HDGFL3-204ENST00000563790 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
HDGFL3-204ENST00000563790 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
HDGFL3-204ENST00000563790 FCHSD2O94868 740 aa16.53■□□□□ 0.24
HDGFL3-204ENST00000563790 TGFB2P61812 414 aa16.53■□□□□ 0.24
HDGFL3-204ENST00000563790 GLTPD2A6NH11 291 aa16.52■□□□□ 0.24
HDGFL3-204ENST00000563790 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
HDGFL3-204ENST00000563790 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
HDGFL3-204ENST00000563790 NLRP13Q86W25 1043 aa16.51■□□□□ 0.23
HDGFL3-204ENST00000563790 AXIN2Q9Y2T1 843 aa16.51■□□□□ 0.23
HDGFL3-204ENST00000563790 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
HDGFL3-204ENST00000563790 SLIT3O75094 1523 aa16.5■□□□□ 0.23
HDGFL3-204ENST00000563790 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
HDGFL3-204ENST00000563790 SOX10P56693 466 aa16.5■□□□□ 0.23
HDGFL3-204ENST00000563790 CHADLQ6NUI6 762 aa16.5■□□□□ 0.23
HDGFL3-204ENST00000563790 DICER1Q9UPY3 1922 aaKnown RBP16.5■□□□□ 0.23
HDGFL3-204ENST00000563790 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
HDGFL3-204ENST00000563790 ZBTB7CA1YPR0 619 aa16.49■□□□□ 0.23
HDGFL3-204ENST00000563790 POTECB2RU33 542 aa16.49■□□□□ 0.23
HDGFL3-204ENST00000563790 KDM6AO15550 1401 aaPredicted RBP16.49■□□□□ 0.23
HDGFL3-204ENST00000563790 ROCK1Q13464 1354 aa16.48■□□□□ 0.23
HDGFL3-204ENST00000563790 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
HDGFL3-204ENST00000563790 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
HDGFL3-204ENST00000563790 SLC17A8Q8NDX2 589 aa16.47■□□□□ 0.23
HDGFL3-204ENST00000563790 POGKQ9P215 609 aa16.47■□□□□ 0.23
HDGFL3-204ENST00000563790 RASSF10A6NK89 507 aa16.46■□□□□ 0.23
HDGFL3-204ENST00000563790 TMEM88BA6NKF7 163 aa16.46■□□□□ 0.23
HDGFL3-204ENST00000563790 UNC80Q8N2C7 3258 aa16.46■□□□□ 0.22
HDGFL3-204ENST00000563790 ERBB3P21860 1342 aa16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 DGKZQ13574 1117 aa16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 DCAF5Q96JK2 942 aa16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 NSD2O96028 1365 aa16.45■□□□□ 0.22
HDGFL3-204ENST00000563790 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
HDGFL3-204ENST00000563790 DPEP1P16444 411 aa16.43■□□□□ 0.22
HDGFL3-204ENST00000563790 NBPF15Q8N660 670 aa16.43■□□□□ 0.22
HDGFL3-204ENST00000563790 CSB-PGBD3P0DP91 1061 aa16.42■□□□□ 0.22
HDGFL3-204ENST00000563790 DEFB115Q30KQ5 88 aa16.42■□□□□ 0.22
HDGFL3-204ENST00000563790 SMIM5Q71RC9 77 aa16.42■□□□□ 0.22
HDGFL3-204ENST00000563790 MINK1Q8N4C8 1332 aaPredicted RBP16.42■□□□□ 0.22
HDGFL3-204ENST00000563790 ANKRD36BQ8N2N9 1353 aa16.41■□□□□ 0.22
HDGFL3-204ENST00000563790 ACEP12821 1306 aa16.41■□□□□ 0.22
HDGFL3-204ENST00000563790 KCNA3P22001 575 aa16.4■□□□□ 0.22
HDGFL3-204ENST00000563790 HMGB2P26583 209 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-204ENST00000563790 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
HDGFL3-204ENST00000563790 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
HDGFL3-204ENST00000563790 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
HDGFL3-204ENST00000563790 SCN4AP35499 1836 aa16.39■□□□□ 0.21
HDGFL3-204ENST00000563790 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
HDGFL3-204ENST00000563790 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
HDGFL3-204ENST00000563790 C4AP0C0L4 1744 aa16.38■□□□□ 0.21
HDGFL3-204ENST00000563790 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 IL2RBP14784 551 aa16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 FAM50AQ14320 339 aaKnown RBP16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
HDGFL3-204ENST00000563790 MMP10P09238 476 aa16.36■□□□□ 0.21
HDGFL3-204ENST00000563790 PIM2Q9P1W9 311 aa16.35■□□□□ 0.21
HDGFL3-204ENST00000563790 USP47Q96K76 1375 aa16.35■□□□□ 0.21
HDGFL3-204ENST00000563790 TRPM7Q96QT4 1865 aa16.34■□□□□ 0.21
HDGFL3-204ENST00000563790 DALRD3Q5D0E6 543 aaKnown RBP16.34■□□□□ 0.21
HDGFL3-204ENST00000563790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
HDGFL3-204ENST00000563790 CA12O43570 354 aa16.33■□□□□ 0.2
HDGFL3-204ENST00000563790 LMNB1P20700 586 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms