RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ADD1P35611 737 aaKnown RBP9.79□□□□□ -0.84
LINC00254-201ENST00000563416 RELBQ01201 579 aa9.79□□□□□ -0.84
LINC00254-201ENST00000563416 OXLD1Q5BKU9 147 aa9.79□□□□□ -0.84
LINC00254-201ENST00000563416 PIK3CDO00329 1044 aa9.78□□□□□ -0.84
LINC00254-201ENST00000563416 CDCA7Q9BWT1 371 aaPredicted RBP9.78□□□□□ -0.84
LINC00254-201ENST00000563416 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
LINC00254-201ENST00000563416 PTGIRP43119 386 aa9.77□□□□□ -0.85
LINC00254-201ENST00000563416 SCTRP47872 440 aa9.77□□□□□ -0.85
LINC00254-201ENST00000563416 EML3Q32P44 896 aa9.77□□□□□ -0.85
LINC00254-201ENST00000563416 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
LINC00254-201ENST00000563416 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
LINC00254-201ENST00000563416 SPINT1O43278 529 aa9.76□□□□□ -0.85
LINC00254-201ENST00000563416 OSBPL3Q9H4L5 887 aa9.76□□□□□ -0.85
LINC00254-201ENST00000563416 ATP9BO43861 1147 aa9.75□□□□□ -0.85
LINC00254-201ENST00000563416 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
LINC00254-201ENST00000563416 USP17L5A8MUK1 530 aa9.74□□□□□ -0.85
LINC00254-201ENST00000563416 POTECB2RU33 542 aa9.74□□□□□ -0.85
LINC00254-201ENST00000563416 GNRH1P01148 92 aa9.74□□□□□ -0.85
LINC00254-201ENST00000563416 ZNF395Q9H8N7 513 aaPredicted RBP9.74□□□□□ -0.85
LINC00254-201ENST00000563416 TBC1D9Q6ZT07 1266 aa9.73□□□□□ -0.85
LINC00254-201ENST00000563416 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
LINC00254-201ENST00000563416 NOD1Q9Y239 953 aa9.73□□□□□ -0.85
LINC00254-201ENST00000563416 TTLL8A6PVC2 850 aa9.72□□□□□ -0.85
LINC00254-201ENST00000563416 MAN1A2O60476 641 aa9.72□□□□□ -0.85
LINC00254-201ENST00000563416 NCOA4Q13772 614 aa9.72□□□□□ -0.85
LINC00254-201ENST00000563416 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
LINC00254-201ENST00000563416 KDF1Q8NAX2 398 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-201ENST00000563416 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-201ENST00000563416 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
LINC00254-201ENST00000563416 USP17L3A6NCW0 530 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 USP17L4A6NCW7 530 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 SNRPBP14678 240 aaKnown RBP9.71□□□□□ -0.86
LINC00254-201ENST00000563416 ESCO1Q5FWF5 840 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 USP17L2Q6R6M4 530 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
LINC00254-201ENST00000563416 A0A1W2PRU2 124 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 MEN1O00255 615 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 DEPDC4Q8N2C3 294 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 PPP1R12CQ9BZL4 782 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
LINC00254-201ENST00000563416 TFIP11Q9UBB9 837 aaKnown RBP9.7□□□□□ -0.86
LINC00254-201ENST00000563416 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
LINC00254-201ENST00000563416 GPC1P35052 558 aa9.69□□□□□ -0.86
LINC00254-201ENST00000563416 CLN3Q13286 438 aa9.69□□□□□ -0.86
LINC00254-201ENST00000563416 CTSOP43234 321 aaPredicted RBP9.68□□□□□ -0.86
LINC00254-201ENST00000563416 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
LINC00254-201ENST00000563416 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.68□□□□□ -0.86
LINC00254-201ENST00000563416 MAFBQ9Y5Q3 323 aaPredicted RBP9.68□□□□□ -0.86
LINC00254-201ENST00000563416 GTF2IP78347 998 aa9.67□□□□□ -0.86
LINC00254-201ENST00000563416 PSME1Q06323 249 aa9.67□□□□□ -0.86
LINC00254-201ENST00000563416 ESYT1Q9BSJ8 1104 aa9.67□□□□□ -0.86
LINC00254-201ENST00000563416 RAB6BQ9NRW1 208 aa9.67□□□□□ -0.86
LINC00254-201ENST00000563416 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
LINC00254-201ENST00000563416 SLC27A3Q5K4L6 730 aa9.66□□□□□ -0.86
LINC00254-201ENST00000563416 CNKSR1Q969H4 720 aa9.66□□□□□ -0.86
LINC00254-201ENST00000563416 CCDC97Q96F63 343 aaPredicted RBP9.66□□□□□ -0.86
LINC00254-201ENST00000563416 DNMT3LQ9UJW3 386 aa9.66□□□□□ -0.86
LINC00254-201ENST00000563416 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
LINC00254-201ENST00000563416 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
LINC00254-201ENST00000563416 RNF217Q8TC41 542 aa9.65□□□□□ -0.86
LINC00254-201ENST00000563416 MKRN1Q9UHC7 482 aaKnown RBP9.65□□□□□ -0.86
LINC00254-201ENST00000563416 SOBPA7XYQ1 873 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 GTF2E1P29083 439 aaPredicted RBP9.64□□□□□ -0.87
LINC00254-201ENST00000563416 LMOD1P29536 600 aaPredicted RBP9.64□□□□□ -0.87
LINC00254-201ENST00000563416 GDF10P55107 478 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 LYSMD3Q7Z3D4 306 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 XAGE2Q96GT9 111 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 ETNK1Q9HBU6 452 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 SERPINA10Q9UK55 444 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 PCDHGA11Q9Y5H2 935 aa9.64□□□□□ -0.87
LINC00254-201ENST00000563416 WASLO00401 505 aaPredicted RBP9.63□□□□□ -0.87
LINC00254-201ENST00000563416 IL2RAP01589 272 aa9.63□□□□□ -0.87
LINC00254-201ENST00000563416 RBM19Q9Y4C8 960 aaKnown RBP9.63□□□□□ -0.87
LINC00254-201ENST00000563416 ARID3CA6NKF2 412 aa9.62□□□□□ -0.87
LINC00254-201ENST00000563416 INHAP05111 366 aa9.62□□□□□ -0.87
LINC00254-201ENST00000563416 DNAAF2Q9NVR5 837 aaKnown RBP9.62□□□□□ -0.87
LINC00254-201ENST00000563416 BACH1O14867 736 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 SCNN1DP51172 638 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 CENPCQ03188 943 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 LARGE2Q8N3Y3 721 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 OGFOD1Q8N543 542 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
LINC00254-201ENST00000563416 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
LINC00254-201ENST00000563416 RASA1P20936 1047 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 TLR1Q15399 786 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
LINC00254-201ENST00000563416 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
LINC00254-201ENST00000563416 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
LINC00254-201ENST00000563416 CLDN10P78369 228 aa9.59□□□□□ -0.87
LINC00254-201ENST00000563416 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
LINC00254-201ENST00000563416 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
LINC00254-201ENST00000563416 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
LINC00254-201ENST00000563416 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
LINC00254-201ENST00000563416 HRH3Q9Y5N1 445 aa9.59□□□□□ -0.87
LINC00254-201ENST00000563416 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms