RNA–Protein interactions for RNA: ENST00000562789.5

COMMD4-207, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-207ENST00000562789 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
COMMD4-207ENST00000562789 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
COMMD4-207ENST00000562789 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
COMMD4-207ENST00000562789 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
COMMD4-207ENST00000562789 DDX54Q8TDD1 881 aaKnown RBP21.96■■□□□ 1.11
COMMD4-207ENST00000562789 PARD3Q8TEW0 1356 aa21.96■■□□□ 1.11
COMMD4-207ENST00000562789 EIF4A2Q14240 407 aaKnown RBP21.95■■□□□ 1.1
COMMD4-207ENST00000562789 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
COMMD4-207ENST00000562789 ACSBG1Q96GR2 724 aa21.94■■□□□ 1.1
COMMD4-207ENST00000562789 BCL11BQ9C0K0 894 aaPredicted RBP21.94■■□□□ 1.1
COMMD4-207ENST00000562789 PTF1AQ7RTS3 328 aa21.93■■□□□ 1.1
COMMD4-207ENST00000562789 CAMKK2Q96RR4 588 aa21.93■■□□□ 1.1
COMMD4-207ENST00000562789 NPC1L1Q9UHC9 1359 aa21.93■■□□□ 1.1
COMMD4-207ENST00000562789 EYA1Q99502 592 aa21.92■■□□□ 1.1
COMMD4-207ENST00000562789 ITGB4P16144 1822 aa21.92■■□□□ 1.1
COMMD4-207ENST00000562789 TOGARAM1Q9Y4F4 1720 aa21.92■■□□□ 1.1
COMMD4-207ENST00000562789 PCDH11XQ9BZA7 1347 aa21.9■■□□□ 1.1
COMMD4-207ENST00000562789 PCDH11YQ9BZA8 1340 aa21.9■■□□□ 1.1
COMMD4-207ENST00000562789 KCNQ2O43526 872 aa21.89■■□□□ 1.09
COMMD4-207ENST00000562789 IGSF1Q8N6C5 1336 aa21.88■■□□□ 1.09
COMMD4-207ENST00000562789 MTHFSP49914 203 aa21.86■■□□□ 1.09
COMMD4-207ENST00000562789 SYTL4Q96C24 671 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-207ENST00000562789 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
COMMD4-207ENST00000562789 PSDA5PKW4 1024 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-207ENST00000562789 PLSCR1O15162 318 aa21.85■■□□□ 1.09
COMMD4-207ENST00000562789 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
COMMD4-207ENST00000562789 LY75O60449 1722 aa21.85■■□□□ 1.09
COMMD4-207ENST00000562789 SPG7Q9UQ90 795 aa21.84■■□□□ 1.09
COMMD4-207ENST00000562789 COL3A1P02461 1466 aaPredicted RBP21.82■■□□□ 1.08
COMMD4-207ENST00000562789 CYP27B1O15528 508 aa21.81■■□□□ 1.08
COMMD4-207ENST00000562789 R3HDM1Q15032 1099 aaKnown RBP21.81■■□□□ 1.08
COMMD4-207ENST00000562789 PLEKHG2Q9H7P9 1386 aa21.8■■□□□ 1.08
COMMD4-207ENST00000562789 IL13P35225 146 aa21.8■■□□□ 1.08
COMMD4-207ENST00000562789 PRIM1P49642 420 aaKnown RBP21.8■■□□□ 1.08
COMMD4-207ENST00000562789 NBPF14Q5TI25 921 aa21.8■■□□□ 1.08
COMMD4-207ENST00000562789 AEBP1Q8IUX7 1158 aa21.8■■□□□ 1.08
COMMD4-207ENST00000562789 SULT6B1Q6IMI4 303 aa21.79■■□□□ 1.08
COMMD4-207ENST00000562789 PAPPAQ13219 1627 aa21.79■■□□□ 1.08
COMMD4-207ENST00000562789 LRP5O75197 1615 aa21.78■■□□□ 1.08
COMMD4-207ENST00000562789 TXNRD1Q16881 649 aa21.78■■□□□ 1.08
COMMD4-207ENST00000562789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.78■■□□□ 1.08
COMMD4-207ENST00000562789 KDRP35968 1356 aa21.77■■□□□ 1.08
COMMD4-207ENST00000562789 DIAPH1O60610 1272 aaKnown RBP21.77■■□□□ 1.08
COMMD4-207ENST00000562789 SCN11AQ9UI33 1791 aa21.76■■□□□ 1.07
COMMD4-207ENST00000562789 TUBGCP6Q96RT7 1819 aa21.76■■□□□ 1.07
COMMD4-207ENST00000562789 C5P01031 1676 aa21.75■■□□□ 1.07
COMMD4-207ENST00000562789 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
COMMD4-207ENST00000562789 PROM2Q8N271 834 aa21.75■■□□□ 1.07
COMMD4-207ENST00000562789 TAF1LQ8IZX4 1826 aa21.75■■□□□ 1.07
COMMD4-207ENST00000562789 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
COMMD4-207ENST00000562789 PHKG2P15735 406 aa21.74■■□□□ 1.07
COMMD4-207ENST00000562789 PLEKHO1Q53GL0 409 aaPredicted RBP21.74■■□□□ 1.07
COMMD4-207ENST00000562789 CFAP53Q96M91 514 aa21.74■■□□□ 1.07
COMMD4-207ENST00000562789 HMOX1P09601 288 aa21.73■■□□□ 1.07
COMMD4-207ENST00000562789 PPP2R1AP30153 589 aa21.73■■□□□ 1.07
COMMD4-207ENST00000562789 ANO8Q9HCE9 1232 aaPredicted RBP21.73■■□□□ 1.07
COMMD4-207ENST00000562789 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
COMMD4-207ENST00000562789 U2SURPO15042 1029 aaKnown RBP21.72■■□□□ 1.07
COMMD4-207ENST00000562789 DDX10Q13206 875 aaKnown RBP21.72■■□□□ 1.07
COMMD4-207ENST00000562789 AMOTQ4VCS5 1084 aa21.72■■□□□ 1.07
COMMD4-207ENST00000562789 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
COMMD4-207ENST00000562789 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
COMMD4-207ENST00000562789 NKX1-1Q15270 411 aaPredicted RBP21.71■■□□□ 1.07
COMMD4-207ENST00000562789 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
COMMD4-207ENST00000562789 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
COMMD4-207ENST00000562789 PALLDQ8WX93 1383 aa21.68■■□□□ 1.06
COMMD4-207ENST00000562789 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-207ENST00000562789 HSP90AB1P08238 724 aaKnown RBP21.67■■□□□ 1.06
COMMD4-207ENST00000562789 SLC27A3Q5K4L6 730 aa21.67■■□□□ 1.06
COMMD4-207ENST00000562789 LRRC4BQ9NT99 713 aa21.67■■□□□ 1.06
COMMD4-207ENST00000562789 TMOD3Q9NYL9 352 aa21.67■■□□□ 1.06
COMMD4-207ENST00000562789 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
COMMD4-207ENST00000562789 KCNQ4P56696 695 aa21.65■■□□□ 1.06
COMMD4-207ENST00000562789 SLC15A2Q16348 729 aa21.65■■□□□ 1.06
COMMD4-207ENST00000562789 PIGBQ92521 554 aa21.65■■□□□ 1.06
COMMD4-207ENST00000562789 DCAF5Q96JK2 942 aa21.65■■□□□ 1.06
COMMD4-207ENST00000562789 ADAMTS7Q9UKP4 1686 aa21.63■■□□□ 1.05
COMMD4-207ENST00000562789 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
COMMD4-207ENST00000562789 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
COMMD4-207ENST00000562789 SMARCC1Q92922 1105 aaPredicted RBP21.62■■□□□ 1.05
COMMD4-207ENST00000562789 ZNF827Q17R98 1081 aa21.61■■□□□ 1.05
COMMD4-207ENST00000562789 ERVV-2B6SEH9 535 aa21.6■■□□□ 1.05
COMMD4-207ENST00000562789 AKAP4Q5JQC9 854 aa21.6■■□□□ 1.05
COMMD4-207ENST00000562789 ZNF831Q5JPB2 1677 aa21.6■■□□□ 1.05
COMMD4-207ENST00000562789 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
COMMD4-207ENST00000562789 U2AF1L5P0DN76 240 aaPredicted RBP21.59■■□□□ 1.05
COMMD4-207ENST00000562789 COL5A3P25940 1745 aaPredicted RBP21.59■■□□□ 1.05
COMMD4-207ENST00000562789 CABP4P57796 275 aa21.59■■□□□ 1.05
COMMD4-207ENST00000562789 U2AF1Q01081 240 aaKnown RBP eCLIP21.59■■□□□ 1.05
COMMD4-207ENST00000562789 RALBP1Q15311 655 aa21.59■■□□□ 1.05
COMMD4-207ENST00000562789 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
COMMD4-207ENST00000562789 UBR3Q6ZT12 1888 aa21.59■■□□□ 1.05
COMMD4-207ENST00000562789 MRC1P22897 1456 aa21.58■■□□□ 1.05
COMMD4-207ENST00000562789 PDGFDQ9GZP0 370 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-207ENST00000562789 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
COMMD4-207ENST00000562789 SIPA1L3O60292 1781 aaPredicted RBP21.58■■□□□ 1.04
COMMD4-207ENST00000562789 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
COMMD4-207ENST00000562789 PRKAR2BP31323 418 aa21.57■■□□□ 1.04
COMMD4-207ENST00000562789 AKT1S1Q96B36 256 aa21.57■■□□□ 1.04
COMMD4-207ENST00000562789 RSPH6AQ9H0K4 717 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms