RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
GSE1-212ENST00000562659 MIER1Q8N108 512 aa17.38■□□□□ 0.37
GSE1-212ENST00000562659 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
GSE1-212ENST00000562659 RAPGEF4Q8WZA2 1011 aa17.38■□□□□ 0.37
GSE1-212ENST00000562659 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
GSE1-212ENST00000562659 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
GSE1-212ENST00000562659 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
GSE1-212ENST00000562659 RGPD1P0DJD0 1748 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
GSE1-212ENST00000562659 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
GSE1-212ENST00000562659 AMOTQ4VCS5 1084 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 GLI3P10071 1580 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
GSE1-212ENST00000562659 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
GSE1-212ENST00000562659 AEBP1Q8IUX7 1158 aa17.34■□□□□ 0.37
GSE1-212ENST00000562659 ADAMTS8Q9UP79 889 aa17.33■□□□□ 0.36
GSE1-212ENST00000562659 EXOC5O00471 708 aa17.32■□□□□ 0.36
GSE1-212ENST00000562659 HMOX1P09601 288 aa17.32■□□□□ 0.36
GSE1-212ENST00000562659 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
GSE1-212ENST00000562659 SEPT12Q8IYM1 358 aa17.32■□□□□ 0.36
GSE1-212ENST00000562659 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
GSE1-212ENST00000562659 MEGF6O75095 1541 aa17.31■□□□□ 0.36
GSE1-212ENST00000562659 DDB1Q16531 1140 aa17.31■□□□□ 0.36
GSE1-212ENST00000562659 ZCRB1Q8TBF4 217 aaKnown RBP17.31■□□□□ 0.36
GSE1-212ENST00000562659 PLEKHF1Q96S99 279 aa17.31■□□□□ 0.36
GSE1-212ENST00000562659 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
GSE1-212ENST00000562659 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
GSE1-212ENST00000562659 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
GSE1-212ENST00000562659 NEFMP07197 916 aa17.29■□□□□ 0.36
GSE1-212ENST00000562659 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
GSE1-212ENST00000562659 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
GSE1-212ENST00000562659 POTEHQ6S545 545 aa17.28■□□□□ 0.36
GSE1-212ENST00000562659 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
GSE1-212ENST00000562659 RUNDC1Q96C34 613 aa17.28■□□□□ 0.36
GSE1-212ENST00000562659 PDE3BQ13370 1112 aa17.27■□□□□ 0.36
GSE1-212ENST00000562659 BCL9O00512 1426 aa17.27■□□□□ 0.35
GSE1-212ENST00000562659 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
GSE1-212ENST00000562659 PHACTR3Q96KR7 559 aa17.26■□□□□ 0.35
GSE1-212ENST00000562659 RGS12O14924 1447 aa17.26■□□□□ 0.35
GSE1-212ENST00000562659 A0A0G2JS52 829 aa17.25■□□□□ 0.35
GSE1-212ENST00000562659 MYT1Q01538 1121 aa17.25■□□□□ 0.35
GSE1-212ENST00000562659 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
GSE1-212ENST00000562659 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
GSE1-212ENST00000562659 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
GSE1-212ENST00000562659 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
GSE1-212ENST00000562659 CYP27B1O15528 508 aa17.24■□□□□ 0.35
GSE1-212ENST00000562659 HSP90AB1P08238 724 aaKnown RBP17.24■□□□□ 0.35
GSE1-212ENST00000562659 KCNA4P22459 653 aa17.24■□□□□ 0.35
GSE1-212ENST00000562659 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
GSE1-212ENST00000562659 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
GSE1-212ENST00000562659 RGPD2P0DJD1 1756 aa17.23■□□□□ 0.35
GSE1-212ENST00000562659 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
GSE1-212ENST00000562659 PHKG2P15735 406 aa17.23■□□□□ 0.35
GSE1-212ENST00000562659 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
GSE1-212ENST00000562659 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
GSE1-212ENST00000562659 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
GSE1-212ENST00000562659 SLC4A2P04920 1241 aa17.22■□□□□ 0.35
GSE1-212ENST00000562659 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
GSE1-212ENST00000562659 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
GSE1-212ENST00000562659 FAM9BQ8IZU0 186 aa17.22■□□□□ 0.35
GSE1-212ENST00000562659 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
GSE1-212ENST00000562659 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
GSE1-212ENST00000562659 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
GSE1-212ENST00000562659 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
GSE1-212ENST00000562659 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
GSE1-212ENST00000562659 LRRC37A3O60309 1634 aa17.2■□□□□ 0.34
GSE1-212ENST00000562659 WNK3Q9BYP7 1800 aa17.19■□□□□ 0.34
GSE1-212ENST00000562659 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
GSE1-212ENST00000562659 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
GSE1-212ENST00000562659 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
GSE1-212ENST00000562659 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
GSE1-212ENST00000562659 ERVV-2B6SEH9 535 aa17.17■□□□□ 0.34
GSE1-212ENST00000562659 APAF1O14727 1248 aa17.17■□□□□ 0.34
GSE1-212ENST00000562659 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
GSE1-212ENST00000562659 RIPK4P57078 832 aa17.16■□□□□ 0.34
GSE1-212ENST00000562659 RTF1Q92541 710 aaKnown RBP17.15■□□□□ 0.34
GSE1-212ENST00000562659 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
GSE1-212ENST00000562659 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
GSE1-212ENST00000562659 IL17REQ8NFR9 667 aa17.13■□□□□ 0.33
GSE1-212ENST00000562659 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
GSE1-212ENST00000562659 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
GSE1-212ENST00000562659 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
GSE1-212ENST00000562659 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
GSE1-212ENST00000562659 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
GSE1-212ENST00000562659 CALD1Q05682 793 aaKnown RBP17.11■□□□□ 0.33
GSE1-212ENST00000562659 CCDC125Q86Z20 511 aa17.11■□□□□ 0.33
GSE1-212ENST00000562659 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
GSE1-212ENST00000562659 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
GSE1-212ENST00000562659 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
GSE1-212ENST00000562659 PRIM1P49642 420 aaKnown RBP17.09■□□□□ 0.33
GSE1-212ENST00000562659 CABP4P57796 275 aa17.09■□□□□ 0.33
GSE1-212ENST00000562659 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
GSE1-212ENST00000562659 RRP7AQ9Y3A4 280 aaKnown RBP17.09■□□□□ 0.33
GSE1-212ENST00000562659 ADAMTS7Q9UKP4 1686 aa17.09■□□□□ 0.33
GSE1-212ENST00000562659 MRC1P22897 1456 aa17.08■□□□□ 0.32
GSE1-212ENST00000562659 TEFQ10587 303 aa17.08■□□□□ 0.32
GSE1-212ENST00000562659 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
GSE1-212ENST00000562659 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms