RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
TCF4-211ENST00000561992 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
TCF4-211ENST00000561992 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
TCF4-211ENST00000561992 SYAP1Q96A49 352 aaPredicted RBP12.12□□□□□ -0.47
TCF4-211ENST00000561992 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
TCF4-211ENST00000561992 PHF14O94880 888 aa12.11□□□□□ -0.47
TCF4-211ENST00000561992 ARHGEF40Q8TER5 1519 aa12.1□□□□□ -0.47
TCF4-211ENST00000561992 DLC1Q96QB1 1528 aa12.1□□□□□ -0.47
TCF4-211ENST00000561992 AATKQ6ZMQ8 1374 aa12.1□□□□□ -0.47
TCF4-211ENST00000561992 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
TCF4-211ENST00000561992 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
TCF4-211ENST00000561992 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
TCF4-211ENST00000561992 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 ILDR1Q86SU0 546 aaPredicted RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 R3HCC1Q9Y3T6 440 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 CCDC9Q9Y3X0 531 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 ERC2O15083 957 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 UVSSAQ2YD98 709 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 INTS4Q96HW7 963 aaKnown RBP12.09□□□□□ -0.47
TCF4-211ENST00000561992 ARID3AQ99856 593 aa12.09□□□□□ -0.47
TCF4-211ENST00000561992 ATP10DQ9P241 1426 aa12.08□□□□□ -0.47
TCF4-211ENST00000561992 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.47
TCF4-211ENST00000561992 PTPRCP08575 1304 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 PRPF40AO75400 957 aaKnown RBP12.08□□□□□ -0.48
TCF4-211ENST00000561992 ANAPC15P60006 121 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
TCF4-211ENST00000561992 GPT2Q8TD30 523 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 MBIPQ9NS73 344 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 UQCRHP07919 91 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
TCF4-211ENST00000561992 KNDC1Q76NI1 1749 aa12.07□□□□□ -0.48
TCF4-211ENST00000561992 SSH2Q76I76 1423 aa12.07□□□□□ -0.48
TCF4-211ENST00000561992 RIMS2Q9UQ26 1411 aa12.07□□□□□ -0.48
TCF4-211ENST00000561992 KIAA0232Q92628 1395 aa12.07□□□□□ -0.48
TCF4-211ENST00000561992 HMMRO75330 724 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 SDSP20132 328 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
TCF4-211ENST00000561992 CUL4AQ13619 759 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 PRIMPOLQ96LW4 560 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 ZDHHC9Q9Y397 364 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 MCCP23508 829 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
TCF4-211ENST00000561992 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
TCF4-211ENST00000561992 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
TCF4-211ENST00000561992 BRD1O95696 1058 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 IL13P35225 146 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 TSPY26PQ9H489 355 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 TMEM131LA2VDJ0 1609 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 GGT6Q6P531 493 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 TMEM63CQ9P1W3 806 aa12.05□□□□□ -0.48
TCF4-211ENST00000561992 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
TCF4-211ENST00000561992 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
TCF4-211ENST00000561992 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
TCF4-211ENST00000561992 NEO1Q92859 1461 aa12.04□□□□□ -0.48
TCF4-211ENST00000561992 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
TCF4-211ENST00000561992 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
TCF4-211ENST00000561992 CDK19Q9BWU1 502 aa12.03□□□□□ -0.48
TCF4-211ENST00000561992 RTL1A6NKG5 1358 aa12.03□□□□□ -0.48
TCF4-211ENST00000561992 RGS12O14924 1447 aa12.03□□□□□ -0.48
TCF4-211ENST00000561992 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
TCF4-211ENST00000561992 FAM13BQ9NYF5 915 aa12.03□□□□□ -0.48
TCF4-211ENST00000561992 SYCE3A1L190 88 aa12.02□□□□□ -0.48
TCF4-211ENST00000561992 GTF2F1P35269 517 aaKnown RBP eCLIP12.02□□□□□ -0.48
TCF4-211ENST00000561992 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.48
TCF4-211ENST00000561992 C8orf58Q8NAV2 365 aa12.02□□□□□ -0.48
TCF4-211ENST00000561992 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.48
TCF4-211ENST00000561992 MYRIPQ8NFW9 859 aa12.02□□□□□ -0.48
TCF4-211ENST00000561992 ALKQ9UM73 1620 aa12.02□□□□□ -0.48
TCF4-211ENST00000561992 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
TCF4-211ENST00000561992 PKP1Q13835 747 aa12.02□□□□□ -0.49
TCF4-211ENST00000561992 UTP14CQ5TAP6 766 aaKnown RBP12.02□□□□□ -0.49
TCF4-211ENST00000561992 TMX3Q96JJ7 454 aa12.02□□□□□ -0.49
TCF4-211ENST00000561992 TPM3P06753 285 aa12.01□□□□□ -0.49
TCF4-211ENST00000561992 IDI1Q13907 227 aa12.01□□□□□ -0.49
TCF4-211ENST00000561992 CCDC94Q9BW85 323 aaPredicted RBP12.01□□□□□ -0.49
TCF4-211ENST00000561992 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
TCF4-211ENST00000561992 RBM27Q9P2N5 1060 aaKnown RBP12.01□□□□□ -0.49
TCF4-211ENST00000561992 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
TCF4-211ENST00000561992 RBM10P98175 930 aaKnown RBP12.01□□□□□ -0.49
TCF4-211ENST00000561992 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
TCF4-211ENST00000561992 WDR33Q9C0J8 1336 aaKnown RBP12□□□□□ -0.49
TCF4-211ENST00000561992 ARHGEF10O15013 1369 aa12□□□□□ -0.49
TCF4-211ENST00000561992 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
TCF4-211ENST00000561992 PTMAP06454 111 aaKnown RBP12□□□□□ -0.49
TCF4-211ENST00000561992 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
TCF4-211ENST00000561992 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
TCF4-211ENST00000561992 SRCIN1Q9C0H9 1055 aa12□□□□□ -0.49
TCF4-211ENST00000561992 STK26Q9P289 416 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms