RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 KNSTRNQ9Y448 316 aa24.71■■□□□ 1.55
FANCA-206ENST00000561660 NHSQ6T4R5 1651 aa24.71■■□□□ 1.55
FANCA-206ENST00000561660 MAP2P11137 1827 aaKnown RBP24.7■■□□□ 1.55
FANCA-206ENST00000561660 RGPD3A6NKT7 1758 aaPredicted RBP24.7■■□□□ 1.55
FANCA-206ENST00000561660 RGPD4Q7Z3J3 1758 aa24.7■■□□□ 1.55
FANCA-206ENST00000561660 RAPGEF4Q8WZA2 1011 aa24.7■■□□□ 1.54
FANCA-206ENST00000561660 NCAPD2Q15021 1401 aa24.69■■□□□ 1.54
FANCA-206ENST00000561660 TATP17735 454 aaPredicted RBP24.69■■□□□ 1.54
FANCA-206ENST00000561660 NBPF14Q5TI25 921 aa24.69■■□□□ 1.54
FANCA-206ENST00000561660 EYA1Q99502 592 aa24.69■■□□□ 1.54
FANCA-206ENST00000561660 ANO8Q9HCE9 1232 aaPredicted RBP24.69■■□□□ 1.54
FANCA-206ENST00000561660 SHANK3Q9BYB0 1731 aa24.69■■□□□ 1.54
FANCA-206ENST00000561660 PER1O15534 1290 aaPredicted RBP24.68■■□□□ 1.54
FANCA-206ENST00000561660 EIF4A2Q14240 407 aaKnown RBP24.68■■□□□ 1.54
FANCA-206ENST00000561660 TXNRD1Q16881 649 aa24.68■■□□□ 1.54
FANCA-206ENST00000561660 MORC1Q86VD1 984 aa24.68■■□□□ 1.54
FANCA-206ENST00000561660 PRIM1P49642 420 aaKnown RBP24.65■■□□□ 1.54
FANCA-206ENST00000561660 CYP27B1O15528 508 aa24.62■■□□□ 1.53
FANCA-206ENST00000561660 BTAF1O14981 1849 aa24.61■■□□□ 1.53
FANCA-206ENST00000561660 LRP5O75197 1615 aa24.61■■□□□ 1.53
FANCA-206ENST00000561660 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
FANCA-206ENST00000561660 KAT6BQ8WYB5 2073 aa24.6■■□□□ 1.53
FANCA-206ENST00000561660 PCDH11XQ9BZA7 1347 aa24.6■■□□□ 1.53
FANCA-206ENST00000561660 PCDH11YQ9BZA8 1340 aa24.6■■□□□ 1.53
FANCA-206ENST00000561660 LRRC4BQ9NT99 713 aa24.59■■□□□ 1.53
FANCA-206ENST00000561660 PDGFDQ9GZP0 370 aaPredicted RBP24.58■■□□□ 1.53
FANCA-206ENST00000561660 IGSF1Q8N6C5 1336 aa24.58■■□□□ 1.52
FANCA-206ENST00000561660 DOT1LQ8TEK3 1739 aa24.57■■□□□ 1.52
FANCA-206ENST00000561660 SLC15A2Q16348 729 aa24.55■■□□□ 1.52
FANCA-206ENST00000561660 CC2D1BQ5T0F9 858 aaKnown RBP24.55■■□□□ 1.52
FANCA-206ENST00000561660 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
FANCA-206ENST00000561660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.54■■□□□ 1.523e-7■■□□□ 12.5
FANCA-206ENST00000561660 NKX1-1Q15270 411 aaPredicted RBP24.53■■□□□ 1.52
FANCA-206ENST00000561660 STK32BQ9NY57 414 aa24.53■■□□□ 1.52
FANCA-206ENST00000561660 SPG7Q9UQ90 795 aa24.53■■□□□ 1.52
FANCA-206ENST00000561660 IL13P35225 146 aa24.52■■□□□ 1.52
FANCA-206ENST00000561660 KCNQ4P56696 695 aa24.52■■□□□ 1.52
FANCA-206ENST00000561660 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
FANCA-206ENST00000561660 MTHFSP49914 203 aa24.51■■□□□ 1.51
FANCA-206ENST00000561660 ZNF827Q17R98 1081 aa24.51■■□□□ 1.51
FANCA-206ENST00000561660 AEBP1Q8IUX7 1158 aa24.51■■□□□ 1.51
FANCA-206ENST00000561660 NPC1L1Q9UHC9 1359 aa24.51■■□□□ 1.51
FANCA-206ENST00000561660 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
FANCA-206ENST00000561660 PHKG2P15735 406 aa24.49■■□□□ 1.51
FANCA-206ENST00000561660 CNGB1Q14028 1251 aaPredicted RBP24.48■■□□□ 1.51
FANCA-206ENST00000561660 MPRIPQ6WCQ1 1025 aa24.48■■□□□ 1.51
FANCA-206ENST00000561660 CASZ1Q86V15 1759 aa24.48■■□□□ 1.51
FANCA-206ENST00000561660 AKT1S1Q96B36 256 aa24.48■■□□□ 1.51
FANCA-206ENST00000561660 TOGARAM1Q9Y4F4 1720 aa24.48■■□□□ 1.51
FANCA-206ENST00000561660 PLEKHG2Q9H7P9 1386 aa24.46■■□□□ 1.51
FANCA-206ENST00000561660 IFNL2Q8IZJ0 200 aa24.46■■□□□ 1.51
FANCA-206ENST00000561660 PIGBQ92521 554 aa24.46■■□□□ 1.51
FANCA-206ENST00000561660 SPON1Q9HCB6 807 aa24.46■■□□□ 1.51
FANCA-206ENST00000561660 SULT6B1Q6IMI4 303 aa24.45■■□□□ 1.5
FANCA-206ENST00000561660 ZBTB7AO95365 584 aa24.44■■□□□ 1.5
FANCA-206ENST00000561660 CCNL1Q9UK58 526 aaPredicted RBP24.44■■□□□ 1.5
FANCA-206ENST00000561660 LY75O60449 1722 aa24.44■■□□□ 1.5
FANCA-206ENST00000561660 KDRP35968 1356 aa24.43■■□□□ 1.5
FANCA-206ENST00000561660 PLEKHO1Q53GL0 409 aaPredicted RBP24.42■■□□□ 1.5
FANCA-206ENST00000561660 PALLDQ8WX93 1383 aa24.41■■□□□ 1.5
FANCA-206ENST00000561660 ATF5Q9Y2D1 282 aaPredicted RBP24.4■■□□□ 1.5
FANCA-206ENST00000561660 PTGER2P43116 358 aa24.39■■□□□ 1.49
FANCA-206ENST00000561660 AMOTQ4VCS5 1084 aa24.39■■□□□ 1.49
FANCA-206ENST00000561660 ZNF530Q6P9A1 599 aaPredicted RBP24.39■■□□□ 1.49
FANCA-206ENST00000561660 ITGB4P16144 1822 aa24.39■■□□□ 1.49
FANCA-206ENST00000561660 PNPLA7Q6ZV29 1317 aa24.37■■□□□ 1.49
FANCA-206ENST00000561660 DIAPH1O60610 1272 aaKnown RBP24.37■■□□□ 1.49
FANCA-206ENST00000561660 TMOD3Q9NYL9 352 aa24.37■■□□□ 1.49
FANCA-206ENST00000561660 COL3A1P02461 1466 aaPredicted RBP24.37■■□□□ 1.49
FANCA-206ENST00000561660 HMOX1P09601 288 aa24.36■■□□□ 1.49
FANCA-206ENST00000561660 SMARCC1Q92922 1105 aaPredicted RBP24.36■■□□□ 1.49
FANCA-206ENST00000561660 SGIP1Q9BQI5 828 aa24.36■■□□□ 1.49
FANCA-206ENST00000561660 MTFR1LQ9H019 292 aa24.36■■□□□ 1.49
FANCA-206ENST00000561660 ASAP1Q9ULH1 1129 aa24.36■■□□□ 1.49
FANCA-206ENST00000561660 KDM6AO15550 1401 aaPredicted RBP24.35■■□□□ 1.49
FANCA-206ENST00000561660 DCAF5Q96JK2 942 aa24.35■■□□□ 1.49
FANCA-206ENST00000561660 TFCP2L1Q9NZI6 479 aa24.35■■□□□ 1.49
FANCA-206ENST00000561660 ATG3Q9NT62 314 aa24.34■■□□□ 1.49
FANCA-206ENST00000561660 ERVV-2B6SEH9 535 aa24.33■■□□□ 1.49
FANCA-206ENST00000561660 HSP90AB1P08238 724 aaKnown RBP24.33■■□□□ 1.49
FANCA-206ENST00000561660 PPP1R1BQ9UD71 204 aaPredicted RBP24.33■■□□□ 1.49
FANCA-206ENST00000561660 LOC102724428A0A0B4J2F2 783 aa24.3■■□□□ 1.48
FANCA-206ENST00000561660 SIK1P57059 783 aa24.3■■□□□ 1.48
FANCA-206ENST00000561660 C1orf141Q5JVX7 400 aa24.3■■□□□ 1.48
FANCA-206ENST00000561660 TUBGCP6Q96RT7 1819 aa24.29■■□□□ 1.48
FANCA-206ENST00000561660 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
FANCA-206ENST00000561660 COL23A1Q86Y22 540 aaPredicted RBP24.29■■□□□ 1.48
FANCA-206ENST00000561660 QSER1Q2KHR3 1735 aa24.28■■□□□ 1.48
FANCA-206ENST00000561660 ITPK1Q13572 414 aa24.28■■□□□ 1.48
FANCA-206ENST00000561660 AMIGO3Q86WK7 504 aa24.28■■□□□ 1.48
FANCA-206ENST00000561660 SLC16A10Q8TF71 515 aa24.28■■□□□ 1.48
FANCA-206ENST00000561660 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
FANCA-206ENST00000561660 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
FANCA-206ENST00000561660 LINC00116Q8NCU8 138 aa24.27■■□□□ 1.48
FANCA-206ENST00000561660 SLC4A9Q96Q91 983 aa24.27■■□□□ 1.48
FANCA-206ENST00000561660 C5P01031 1676 aa24.27■■□□□ 1.48
FANCA-206ENST00000561660 U2SURPO15042 1029 aaKnown RBP24.26■■□□□ 1.47
FANCA-206ENST00000561660 CABP4P57796 275 aa24.26■■□□□ 1.47
FANCA-206ENST00000561660 SMIM5Q71RC9 77 aa24.25■■□□□ 1.47
FANCA-206ENST00000561660 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms