RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SHANK3Q9BYB0 1731 aa27.01■■□□□ 1.91
TSPAN3-210ENST00000561277 PTF1AQ7RTS3 328 aa26.99■■□□□ 1.91
TSPAN3-210ENST00000561277 ACSBG1Q96GR2 724 aa26.98■■□□□ 1.91
TSPAN3-210ENST00000561277 IGSF1Q8N6C5 1336 aa26.97■■□□□ 1.91
TSPAN3-210ENST00000561277 EZH2Q15910 746 aaKnown RBP26.96■■□□□ 1.91
TSPAN3-210ENST00000561277 BCL11BQ9C0K0 894 aaPredicted RBP26.96■■□□□ 1.91
TSPAN3-210ENST00000561277 NHSQ6T4R5 1651 aa26.95■■□□□ 1.9
TSPAN3-210ENST00000561277 KCNQ2O43526 872 aa26.94■■□□□ 1.9
TSPAN3-210ENST00000561277 DDX10Q13206 875 aaKnown RBP26.94■■□□□ 1.9
TSPAN3-210ENST00000561277 PKD1L3Q7Z443 1732 aa26.93■■□□□ 1.9
TSPAN3-210ENST00000561277 PCDH11XQ9BZA7 1347 aa26.93■■□□□ 1.9
TSPAN3-210ENST00000561277 PCDH11YQ9BZA8 1340 aa26.93■■□□□ 1.9
TSPAN3-210ENST00000561277 IL13P35225 146 aa26.92■■□□□ 1.9
TSPAN3-210ENST00000561277 CAMKK2Q96RR4 588 aa26.92■■□□□ 1.9
TSPAN3-210ENST00000561277 DOT1LQ8TEK3 1739 aa26.91■■□□□ 1.9
TSPAN3-210ENST00000561277 AEBP1Q8IUX7 1158 aa26.9■■□□□ 1.9
TSPAN3-210ENST00000561277 KAT6BQ8WYB5 2073 aa26.9■■□□□ 1.9
TSPAN3-210ENST00000561277 SULT6B1Q6IMI4 303 aa26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 SPG7Q9UQ90 795 aa26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 PARD3Q8TEW0 1356 aa26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 CYP27B1O15528 508 aa26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 DIAPH1O60610 1272 aaKnown RBP26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 SYTL4Q96C24 671 aaPredicted RBP26.88■■□□□ 1.89
TSPAN3-210ENST00000561277 PPP2R1AP30153 589 aa26.87■■□□□ 1.89
TSPAN3-210ENST00000561277 COL3A1P02461 1466 aaPredicted RBP26.86■■□□□ 1.89
TSPAN3-210ENST00000561277 RREB1Q92766 1687 aa26.86■■□□□ 1.89
TSPAN3-210ENST00000561277 BTAF1O14981 1849 aa26.85■■□□□ 1.89
TSPAN3-210ENST00000561277 RGPD3A6NKT7 1758 aaPredicted RBP26.85■■□□□ 1.89
TSPAN3-210ENST00000561277 RGPD4Q7Z3J3 1758 aa26.85■■□□□ 1.89
TSPAN3-210ENST00000561277 PLSCR1O15162 318 aa26.84■■□□□ 1.89
TSPAN3-210ENST00000561277 PRIM1P49642 420 aaKnown RBP26.84■■□□□ 1.89
TSPAN3-210ENST00000561277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.84■■□□□ 1.89
TSPAN3-210ENST00000561277 KDRP35968 1356 aa26.83■■□□□ 1.89
TSPAN3-210ENST00000561277 HMOX1P09601 288 aa26.83■■□□□ 1.89
TSPAN3-210ENST00000561277 CFAP53Q96M91 514 aa26.83■■□□□ 1.89
TSPAN3-210ENST00000561277 NUP188Q5SRE5 1749 aa26.82■■□□□ 1.88
TSPAN3-210ENST00000561277 U2SURPO15042 1029 aaKnown RBP26.81■■□□□ 1.88
TSPAN3-210ENST00000561277 PLEKHG2Q9H7P9 1386 aa26.81■■□□□ 1.88
TSPAN3-210ENST00000561277 PLEKHO1Q53GL0 409 aaPredicted RBP26.8■■□□□ 1.88
TSPAN3-210ENST00000561277 TOGARAM1Q9Y4F4 1720 aa26.79■■□□□ 1.88
TSPAN3-210ENST00000561277 PHKG2P15735 406 aa26.79■■□□□ 1.88
TSPAN3-210ENST00000561277 IFNL2Q8IZJ0 200 aa26.79■■□□□ 1.88
TSPAN3-210ENST00000561277 PSDA5PKW4 1024 aaPredicted RBP26.77■■□□□ 1.88
TSPAN3-210ENST00000561277 AMOTQ4VCS5 1084 aa26.77■■□□□ 1.88
TSPAN3-210ENST00000561277 ZNF530Q6P9A1 599 aaPredicted RBP26.76■■□□□ 1.87
TSPAN3-210ENST00000561277 NKX1-1Q15270 411 aaPredicted RBP26.75■■□□□ 1.87
TSPAN3-210ENST00000561277 TXNRD1Q16881 649 aa26.75■■□□□ 1.87
TSPAN3-210ENST00000561277 PROM2Q8N271 834 aa26.75■■□□□ 1.87
TSPAN3-210ENST00000561277 MPRIPQ6WCQ1 1025 aa26.75■■□□□ 1.87
TSPAN3-210ENST00000561277 R3HDM1Q15032 1099 aaKnown RBP26.74■■□□□ 1.87
TSPAN3-210ENST00000561277 ZNF316A6NFI3 1004 aaPredicted RBP26.73■■□□□ 1.87
TSPAN3-210ENST00000561277 ITGB4P16144 1822 aa26.72■■□□□ 1.87
TSPAN3-210ENST00000561277 NBPF14Q5TI25 921 aa26.72■■□□□ 1.87
TSPAN3-210ENST00000561277 RALBP1Q15311 655 aa26.71■■□□□ 1.87
TSPAN3-210ENST00000561277 C1orf141Q5JVX7 400 aa26.71■■□□□ 1.87
TSPAN3-210ENST00000561277 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
TSPAN3-210ENST00000561277 SRCAPQ6ZRS2 3230 aa26.71■■□□□ 1.87
TSPAN3-210ENST00000561277 ANO8Q9HCE9 1232 aaPredicted RBP26.69■■□□□ 1.86
TSPAN3-210ENST00000561277 HSP90AB1P08238 724 aaKnown RBP26.68■■□□□ 1.86
TSPAN3-210ENST00000561277 U2AF1L5P0DN76 240 aaPredicted RBP26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 U2AF1Q01081 240 aaKnown RBP eCLIP26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 DCAF5Q96JK2 942 aa26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 KDM6AO15550 1401 aaPredicted RBP26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 PIGBQ92521 554 aa26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 TMOD3Q9NYL9 352 aa26.67■■□□□ 1.86
TSPAN3-210ENST00000561277 LY75O60449 1722 aa26.66■■□□□ 1.86
TSPAN3-210ENST00000561277 KCNQ4P56696 695 aa26.65■■□□□ 1.86
TSPAN3-210ENST00000561277 LRRC4BQ9NT99 713 aa26.65■■□□□ 1.86
TSPAN3-210ENST00000561277 MTHFSDQ2M296 383 aaKnown RBP26.64■■□□□ 1.86
TSPAN3-210ENST00000561277 PALLDQ8WX93 1383 aa26.64■■□□□ 1.86
TSPAN3-210ENST00000561277 PRKAR2BP31323 418 aa26.63■■□□□ 1.85
TSPAN3-210ENST00000561277 AKAP4Q5JQC9 854 aa26.63■■□□□ 1.85
TSPAN3-210ENST00000561277 MYBBP1AQ9BQG0 1328 aaKnown RBP26.63■■□□□ 1.85
TSPAN3-210ENST00000561277 SLC27A3Q5K4L6 730 aa26.63■■□□□ 1.85
TSPAN3-210ENST00000561277 RSPH6AQ9H0K4 717 aa26.63■■□□□ 1.85
TSPAN3-210ENST00000561277 CCNL1Q9UK58 526 aaPredicted RBP26.62■■□□□ 1.85
TSPAN3-210ENST00000561277 PAPPAQ13219 1627 aa26.61■■□□□ 1.85
TSPAN3-210ENST00000561277 ERVV-2B6SEH9 535 aa26.61■■□□□ 1.85
TSPAN3-210ENST00000561277 STK32BQ9NY57 414 aa26.61■■□□□ 1.85
TSPAN3-210ENST00000561277 CABP4P57796 275 aa26.59■■□□□ 1.85
TSPAN3-210ENST00000561277 PRKRIP1Q9H875 184 aaPredicted RBP26.59■■□□□ 1.85
TSPAN3-210ENST00000561277 SMARCC1Q92922 1105 aaPredicted RBP26.58■■□□□ 1.85
TSPAN3-210ENST00000561277 ASAP1Q9ULH1 1129 aa26.58■■□□□ 1.85
TSPAN3-210ENST00000561277 SCN11AQ9UI33 1791 aa26.58■■□□□ 1.85
TSPAN3-210ENST00000561277 SLC15A2Q16348 729 aa26.58■■□□□ 1.85
TSPAN3-210ENST00000561277 PHACTR3Q96KR7 559 aa26.58■■□□□ 1.85
TSPAN3-210ENST00000561277 GAS2L2Q8NHY3 880 aa26.57■■□□□ 1.84
TSPAN3-210ENST00000561277 FCHSD2O94868 740 aa26.56■■□□□ 1.84
TSPAN3-210ENST00000561277 ZNF827Q17R98 1081 aa26.55■■□□□ 1.84
TSPAN3-210ENST00000561277 LGR6Q9HBX8 967 aa26.55■■□□□ 1.84
TSPAN3-210ENST00000561277 ATG3Q9NT62 314 aa26.54■■□□□ 1.84
TSPAN3-210ENST00000561277 MAP3K5Q99683 1374 aa26.54■■□□□ 1.84
TSPAN3-210ENST00000561277 RNMTO43148 476 aaKnown RBP26.54■■□□□ 1.84
TSPAN3-210ENST00000561277 NFATC2IPQ8NCF5 419 aa26.54■■□□□ 1.84
TSPAN3-210ENST00000561277 VIRMAQ69YN4 1812 aaKnown RBP26.54■■□□□ 1.84
TSPAN3-210ENST00000561277 C5P01031 1676 aa26.52■■□□□ 1.84
TSPAN3-210ENST00000561277 LOC102724428A0A0B4J2F2 783 aa26.51■■□□□ 1.83
TSPAN3-210ENST00000561277 GNAT3A8MTJ3 354 aa26.51■■□□□ 1.83
TSPAN3-210ENST00000561277 SIK1P57059 783 aa26.51■■□□□ 1.83
TSPAN3-210ENST00000561277 PDGFDQ9GZP0 370 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms