RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 MTHFSP49914 203 aa12.22□□□□□ -0.45
SNRPA1-214ENST00000560987 APBA3O96018 575 aa12.21□□□□□ -0.45
SNRPA1-214ENST00000560987 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
SNRPA1-214ENST00000560987 ZCRB1Q8TBF4 217 aaKnown RBP12.21□□□□□ -0.45
SNRPA1-214ENST00000560987 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
SNRPA1-214ENST00000560987 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
SNRPA1-214ENST00000560987 EYA1Q99502 592 aa12.2□□□□□ -0.46
SNRPA1-214ENST00000560987 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
SNRPA1-214ENST00000560987 EP400Q96L91 3159 aa12.19□□□□□ -0.46
SNRPA1-214ENST00000560987 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
SNRPA1-214ENST00000560987 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
SNRPA1-214ENST00000560987 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
SNRPA1-214ENST00000560987 RGPD2P0DJD1 1756 aa12.18□□□□□ -0.46
SNRPA1-214ENST00000560987 PEAK1Q9H792 1746 aa12.17□□□□□ -0.46
SNRPA1-214ENST00000560987 DIAPH1O60610 1272 aaKnown RBP12.16□□□□□ -0.46
SNRPA1-214ENST00000560987 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
SNRPA1-214ENST00000560987 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
SNRPA1-214ENST00000560987 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
SNRPA1-214ENST00000560987 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
SNRPA1-214ENST00000560987 PARP4Q9UKK3 1724 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 OVOS2A0A0G2JMS6 1433 aa12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 DISP2A7MBM2 1401 aa12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 NPC1L1Q9UHC9 1359 aa12.15□□□□□ -0.46
SNRPA1-214ENST00000560987 PSDA5PKW4 1024 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 U2SURPO15042 1029 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 KCNQ2O43526 872 aa12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 KCNA4P22459 653 aa12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 IL13P35225 146 aa12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
SNRPA1-214ENST00000560987 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
SNRPA1-214ENST00000560987 PRIM1P49642 420 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-214ENST00000560987 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
SNRPA1-214ENST00000560987 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
SNRPA1-214ENST00000560987 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 LRRC37A3O60309 1634 aa12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 HMOX1P09601 288 aa12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 NUDCQ9Y266 331 aa12.12□□□□□ -0.47
SNRPA1-214ENST00000560987 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
SNRPA1-214ENST00000560987 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
SNRPA1-214ENST00000560987 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
SNRPA1-214ENST00000560987 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
SNRPA1-214ENST00000560987 MEGF6O75095 1541 aa12.11□□□□□ -0.47
SNRPA1-214ENST00000560987 AEBP1Q8IUX7 1158 aa12.1□□□□□ -0.47
SNRPA1-214ENST00000560987 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
SNRPA1-214ENST00000560987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNRPA1-214ENST00000560987 IGSF1Q8N6C5 1336 aa12.1□□□□□ -0.47
SNRPA1-214ENST00000560987 RGPD1P0DJD0 1748 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 PLSCR1O15162 318 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 CYP27B1O15528 508 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 RALBP1Q15311 655 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 AMOTQ4VCS5 1084 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 C1orf141Q5JVX7 400 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
SNRPA1-214ENST00000560987 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-214ENST00000560987 SRCAPQ6ZRS2 3230 aa12.08□□□□□ -0.48
SNRPA1-214ENST00000560987 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-214ENST00000560987 PHKG2P15735 406 aa12.07□□□□□ -0.48
SNRPA1-214ENST00000560987 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNRPA1-214ENST00000560987 BCL9O00512 1426 aa12.06□□□□□ -0.48
SNRPA1-214ENST00000560987 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-214ENST00000560987 SBF2Q86WG5 1849 aa12.06□□□□□ -0.48
SNRPA1-214ENST00000560987 NEFMP07197 916 aa12.05□□□□□ -0.48
SNRPA1-214ENST00000560987 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
SNRPA1-214ENST00000560987 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
SNRPA1-214ENST00000560987 CABP4P57796 275 aa12.04□□□□□ -0.48
SNRPA1-214ENST00000560987 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-214ENST00000560987 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 PROM2Q8N271 834 aa12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 SPON1Q9HCB6 807 aa12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 PPP1R1BQ9UD71 204 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
SNRPA1-214ENST00000560987 ERVV-2B6SEH9 535 aa12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 PRKAR2BP31323 418 aa12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 KCNQ4P56696 695 aa12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 MTHFSDQ2M296 383 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 PIGBQ92521 554 aa12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 MYBBP1AQ9BQG0 1328 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-214ENST00000560987 FCHSD2O94868 740 aa12.01□□□□□ -0.49
SNRPA1-214ENST00000560987 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-214ENST00000560987 PNNQ9H307 717 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-214ENST00000560987 STK32BQ9NY57 414 aa12.01□□□□□ -0.49
SNRPA1-214ENST00000560987 ANP32CO43423 234 aa12□□□□□ -0.49
SNRPA1-214ENST00000560987 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
SNRPA1-214ENST00000560987 NFATC2IPQ8NCF5 419 aa12□□□□□ -0.49
SNRPA1-214ENST00000560987 GAS2L2Q8NHY3 880 aa12□□□□□ -0.49
SNRPA1-214ENST00000560987 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
SNRPA1-214ENST00000560987 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
SNRPA1-214ENST00000560987 KDRP35968 1356 aa12□□□□□ -0.49
SNRPA1-214ENST00000560987 PHACTR3Q96KR7 559 aa11.99□□□□□ -0.49
SNRPA1-214ENST00000560987 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms