RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
TPM1-227ENST00000560970 ZNF827Q17R98 1081 aa15.04■□□□□ -0
TPM1-227ENST00000560970 COG3Q96JB2 828 aa15.04■□□□□ -0
TPM1-227ENST00000560970 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
TPM1-227ENST00000560970 FHDC1Q9C0D6 1143 aaPredicted RBP15.04■□□□□ -0
TPM1-227ENST00000560970 ST20-MTHFSA0A0A6YYL1 179 aa15.03■□□□□ -0
TPM1-227ENST00000560970 HOXC9P31274 260 aa15.03■□□□□ -0
TPM1-227ENST00000560970 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
TPM1-227ENST00000560970 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
TPM1-227ENST00000560970 SLC24A1O60721 1099 aa15.02■□□□□ -0
TPM1-227ENST00000560970 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
TPM1-227ENST00000560970 C4BP0C0L5 1744 aa15.01□□□□□ -0.01
TPM1-227ENST00000560970 SLC27A3Q5K4L6 730 aa15.01□□□□□ -0.01
TPM1-227ENST00000560970 GOLGB1Q14789 3259 aaKnown RBP15□□□□□ -0.01
TPM1-227ENST00000560970 SYT17Q9BSW7 474 aa15□□□□□ -0.01
TPM1-227ENST00000560970 LRRC4BQ9NT99 713 aa15□□□□□ -0.01
TPM1-227ENST00000560970 AMPHP49418 695 aa14.99□□□□□ -0.01
TPM1-227ENST00000560970 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
TPM1-227ENST00000560970 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
TPM1-227ENST00000560970 ARXQ96QS3 562 aa14.99□□□□□ -0.01
TPM1-227ENST00000560970 FLT4P35916 1363 aa14.98□□□□□ -0.01
TPM1-227ENST00000560970 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
TPM1-227ENST00000560970 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
TPM1-227ENST00000560970 PNPLA7Q6ZV29 1317 aa14.97□□□□□ -0.01
TPM1-227ENST00000560970 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
TPM1-227ENST00000560970 NCAPD2Q15021 1401 aa14.97□□□□□ -0.01
TPM1-227ENST00000560970 TMF1P82094 1093 aa14.96□□□□□ -0.01
TPM1-227ENST00000560970 SLC16A10Q8TF71 515 aa14.96□□□□□ -0.01
TPM1-227ENST00000560970 INSRP06213 1382 aa14.96□□□□□ -0.02
TPM1-227ENST00000560970 NSD3Q9BZ95 1437 aa14.95□□□□□ -0.02
TPM1-227ENST00000560970 RRS1Q15050 365 aaKnown RBP14.95□□□□□ -0.02
TPM1-227ENST00000560970 ZCRB1Q8TBF4 217 aaKnown RBP14.95□□□□□ -0.02
TPM1-227ENST00000560970 PCDH11XQ9BZA7 1347 aa14.94□□□□□ -0.02
TPM1-227ENST00000560970 PCDH11YQ9BZA8 1340 aa14.94□□□□□ -0.02
TPM1-227ENST00000560970 POLD1P28340 1107 aa14.94□□□□□ -0.02
TPM1-227ENST00000560970 PRIM1P49642 420 aaKnown RBP14.94□□□□□ -0.02
TPM1-227ENST00000560970 ZNF784Q8NCA9 323 aaPredicted RBP14.94□□□□□ -0.02
TPM1-227ENST00000560970 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
TPM1-227ENST00000560970 COL5A3P25940 1745 aaPredicted RBP14.94□□□□□ -0.02
TPM1-227ENST00000560970 ZNF831Q5JPB2 1677 aa14.93□□□□□ -0.02
TPM1-227ENST00000560970 FBLN1P23142 703 aa14.93□□□□□ -0.02
TPM1-227ENST00000560970 RAPGEF4Q8WZA2 1011 aa14.93□□□□□ -0.02
TPM1-227ENST00000560970 CCNL1Q9UK58 526 aaPredicted RBP14.93□□□□□ -0.02
TPM1-227ENST00000560970 VIRMAQ69YN4 1812 aaKnown RBP14.92□□□□□ -0.02
TPM1-227ENST00000560970 FYB1O15117 783 aa14.92□□□□□ -0.02
TPM1-227ENST00000560970 NBPF6Q5VWK0 638 aa14.92□□□□□ -0.02
TPM1-227ENST00000560970 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
TPM1-227ENST00000560970 NBPF4Q96M43 638 aa14.92□□□□□ -0.02
TPM1-227ENST00000560970 TFCP2L1Q9NZI6 479 aa14.92□□□□□ -0.02
TPM1-227ENST00000560970 HSPA5P11021 654 aaKnown RBP14.91□□□□□ -0.02
TPM1-227ENST00000560970 KCNQ4P56696 695 aa14.91□□□□□ -0.02
TPM1-227ENST00000560970 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
TPM1-227ENST00000560970 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
TPM1-227ENST00000560970 KIF13BQ9NQT8 1826 aa14.91□□□□□ -0.02
TPM1-227ENST00000560970 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
TPM1-227ENST00000560970 C4AP0C0L4 1744 aa14.9□□□□□ -0.02
TPM1-227ENST00000560970 TATP17735 454 aaPredicted RBP14.89□□□□□ -0.03
TPM1-227ENST00000560970 EIF4G2P78344 907 aaKnown RBP eCLIP14.88□□□□□ -0.03
TPM1-227ENST00000560970 KIAA1551Q9HCM1 1747 aa14.88□□□□□ -0.03
TPM1-227ENST00000560970 GPR162Q16538 588 aa14.87□□□□□ -0.03
TPM1-227ENST00000560970 HSP90AB2PQ58FF8 381 aa14.87□□□□□ -0.03
TPM1-227ENST00000560970 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
TPM1-227ENST00000560970 BRCA1P38398 1863 aaKnown RBP14.86□□□□□ -0.03
TPM1-227ENST00000560970 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
TPM1-227ENST00000560970 NLGN2Q8NFZ4 835 aa14.85□□□□□ -0.03
TPM1-227ENST00000560970 HMGB2P26583 209 aaKnown RBP14.84□□□□□ -0.03
TPM1-227ENST00000560970 COL23A1Q86Y22 540 aaPredicted RBP14.84□□□□□ -0.03
TPM1-227ENST00000560970 PELP1Q8IZL8 1130 aaKnown RBP14.84□□□□□ -0.03
TPM1-227ENST00000560970 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
TPM1-227ENST00000560970 SCN11AQ9UI33 1791 aa14.83□□□□□ -0.03
TPM1-227ENST00000560970 CYP27B1O15528 508 aa14.83□□□□□ -0.04
TPM1-227ENST00000560970 MSH5O43196 834 aa14.83□□□□□ -0.04
TPM1-227ENST00000560970 N4BP2Q86UW6 1770 aaPredicted RBP14.83□□□□□ -0.04
TPM1-227ENST00000560970 MSL1Q68DK7 614 aa14.82□□□□□ -0.04
TPM1-227ENST00000560970 MPRIPQ6WCQ1 1025 aa14.82□□□□□ -0.04
TPM1-227ENST00000560970 CARD14Q9BXL6 1004 aa14.82□□□□□ -0.04
TPM1-227ENST00000560970 TJP1Q07157 1748 aa14.82□□□□□ -0.04
TPM1-227ENST00000560970 FLAD1Q8NFF5 587 aa14.81□□□□□ -0.04
TPM1-227ENST00000560970 SMARCC1Q92922 1105 aaPredicted RBP14.81□□□□□ -0.04
TPM1-227ENST00000560970 AK7Q96M32 723 aa14.8□□□□□ -0.04
TPM1-227ENST00000560970 ARFGEF1Q9Y6D6 1849 aa14.8□□□□□ -0.04
TPM1-227ENST00000560970 SENP3-EIF4A1A0A087X0R7 540 aa14.79□□□□□ -0.04
TPM1-227ENST00000560970 GIGYF1O75420 1035 aaPredicted RBP14.79□□□□□ -0.04
TPM1-227ENST00000560970 YBX3P16989 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
TPM1-227ENST00000560970 KDRP35968 1356 aa14.79□□□□□ -0.04
TPM1-227ENST00000560970 C1QTNF8P60827 252 aa14.79□□□□□ -0.04
TPM1-227ENST00000560970 WASHC2AQ641Q2 1341 aa14.79□□□□□ -0.04
TPM1-227ENST00000560970 SPG7Q9UQ90 795 aa14.79□□□□□ -0.04
TPM1-227ENST00000560970 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
TPM1-227ENST00000560970 GRIN3BO60391 1043 aa14.78□□□□□ -0.04
TPM1-227ENST00000560970 NKX1-1Q15270 411 aaPredicted RBP14.78□□□□□ -0.04
TPM1-227ENST00000560970 POLR3GLQ9BT43 218 aa14.78□□□□□ -0.04
TPM1-227ENST00000560970 ATP10DQ9P241 1426 aa14.77□□□□□ -0.04
TPM1-227ENST00000560970 ADCY9O60503 1353 aa14.77□□□□□ -0.04
TPM1-227ENST00000560970 MYH14Q7Z406 1995 aaKnown RBP14.77□□□□□ -0.04
TPM1-227ENST00000560970 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.05
TPM1-227ENST00000560970 PIGBQ92521 554 aa14.76□□□□□ -0.05
TPM1-227ENST00000560970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.055e-8■■■■□ 19.9
TPM1-227ENST00000560970 TMOD3Q9NYL9 352 aa14.76□□□□□ -0.05
TPM1-227ENST00000560970 KIF7Q2M1P5 1343 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms