RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 RAPGEF4Q8WZA2 1011 aa16.43■□□□□ 0.22
USP8-212ENST00000560730 BCL9O00512 1426 aa16.42■□□□□ 0.22
USP8-212ENST00000560730 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
USP8-212ENST00000560730 KCNQ2O43526 872 aa16.41■□□□□ 0.22
USP8-212ENST00000560730 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
USP8-212ENST00000560730 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
USP8-212ENST00000560730 IGSF1Q8N6C5 1336 aa16.39■□□□□ 0.21
USP8-212ENST00000560730 IL13P35225 146 aa16.39■□□□□ 0.21
USP8-212ENST00000560730 EZH2Q15910 746 aaKnown RBP16.39■□□□□ 0.21
USP8-212ENST00000560730 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
USP8-212ENST00000560730 BCL11BQ9C0K0 894 aaPredicted RBP16.39■□□□□ 0.21
USP8-212ENST00000560730 PKD1L3Q7Z443 1732 aa16.38■□□□□ 0.21
USP8-212ENST00000560730 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
USP8-212ENST00000560730 CYP27B1O15528 508 aa16.36■□□□□ 0.21
USP8-212ENST00000560730 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
USP8-212ENST00000560730 DOT1LQ8TEK3 1739 aa16.35■□□□□ 0.21
USP8-212ENST00000560730 BTAF1O14981 1849 aa16.35■□□□□ 0.21
USP8-212ENST00000560730 PPP2R1AP30153 589 aa16.35■□□□□ 0.21
USP8-212ENST00000560730 COL3A1P02461 1466 aaPredicted RBP16.34■□□□□ 0.21
USP8-212ENST00000560730 PCDH11XQ9BZA7 1347 aa16.34■□□□□ 0.21
USP8-212ENST00000560730 PCDH11YQ9BZA8 1340 aa16.34■□□□□ 0.21
USP8-212ENST00000560730 RREB1Q92766 1687 aa16.34■□□□□ 0.21
USP8-212ENST00000560730 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
USP8-212ENST00000560730 PLSCR1O15162 318 aa16.33■□□□□ 0.2
USP8-212ENST00000560730 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
USP8-212ENST00000560730 PRIM1P49642 420 aaKnown RBP16.33■□□□□ 0.2
USP8-212ENST00000560730 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
USP8-212ENST00000560730 NUP188Q5SRE5 1749 aa16.32■□□□□ 0.2
USP8-212ENST00000560730 PROM2Q8N271 834 aa16.32■□□□□ 0.2
USP8-212ENST00000560730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.32■□□□□ 0.24e-8■■■■■ 28.5
USP8-212ENST00000560730 RGPD3A6NKT7 1758 aaPredicted RBP16.32■□□□□ 0.2
USP8-212ENST00000560730 RGPD4Q7Z3J3 1758 aa16.32■□□□□ 0.2
USP8-212ENST00000560730 KDRP35968 1356 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 MSH5O43196 834 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 HMOX1P09601 288 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 ITGB4P16144 1822 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
USP8-212ENST00000560730 SYTL4Q96C24 671 aaPredicted RBP16.3■□□□□ 0.2
USP8-212ENST00000560730 PHKG2P15735 406 aa16.28■□□□□ 0.2
USP8-212ENST00000560730 NKX1-1Q15270 411 aaPredicted RBP16.28■□□□□ 0.2
USP8-212ENST00000560730 PSDA5PKW4 1024 aaPredicted RBP16.28■□□□□ 0.2
USP8-212ENST00000560730 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
USP8-212ENST00000560730 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
USP8-212ENST00000560730 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
USP8-212ENST00000560730 IFNL2Q8IZJ0 200 aa16.28■□□□□ 0.2
USP8-212ENST00000560730 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
USP8-212ENST00000560730 ZNF530Q6P9A1 599 aaPredicted RBP16.27■□□□□ 0.19
USP8-212ENST00000560730 CFAP53Q96M91 514 aa16.27■□□□□ 0.19
USP8-212ENST00000560730 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
USP8-212ENST00000560730 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
USP8-212ENST00000560730 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
USP8-212ENST00000560730 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
USP8-212ENST00000560730 ANO8Q9HCE9 1232 aaPredicted RBP16.24■□□□□ 0.19
USP8-212ENST00000560730 KCNQ4P56696 695 aa16.23■□□□□ 0.19
USP8-212ENST00000560730 RALBP1Q15311 655 aa16.23■□□□□ 0.19
USP8-212ENST00000560730 PIAS4Q8N2W9 510 aaPredicted RBP16.23■□□□□ 0.19
USP8-212ENST00000560730 PIGBQ92521 554 aa16.23■□□□□ 0.19
USP8-212ENST00000560730 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
USP8-212ENST00000560730 LY75O60449 1722 aa16.23■□□□□ 0.19
USP8-212ENST00000560730 KDM6AO15550 1401 aaPredicted RBP16.22■□□□□ 0.19
USP8-212ENST00000560730 VIRMAQ69YN4 1812 aaKnown RBP16.21■□□□□ 0.19
USP8-212ENST00000560730 MTHFSDQ2M296 383 aaKnown RBP16.21■□□□□ 0.19
USP8-212ENST00000560730 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
USP8-212ENST00000560730 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
USP8-212ENST00000560730 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
USP8-212ENST00000560730 C1orf141Q5JVX7 400 aa16.2■□□□□ 0.18
USP8-212ENST00000560730 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
USP8-212ENST00000560730 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
USP8-212ENST00000560730 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
USP8-212ENST00000560730 SCN11AQ9UI33 1791 aa16.2■□□□□ 0.18
USP8-212ENST00000560730 HSP90AB1P08238 724 aaKnown RBP16.19■□□□□ 0.18
USP8-212ENST00000560730 PHACTR3Q96KR7 559 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 ASAP1Q9ULH1 1129 aa16.19■□□□□ 0.18
USP8-212ENST00000560730 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
USP8-212ENST00000560730 PRKRIP1Q9H875 184 aaPredicted RBP16.18■□□□□ 0.18
USP8-212ENST00000560730 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
USP8-212ENST00000560730 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
USP8-212ENST00000560730 MYBBP1AQ9BQG0 1328 aaKnown RBP16.17■□□□□ 0.18
USP8-212ENST00000560730 ADRA2BP18089 450 aa16.17■□□□□ 0.18
USP8-212ENST00000560730 SLC27A3Q5K4L6 730 aa16.17■□□□□ 0.18
USP8-212ENST00000560730 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
USP8-212ENST00000560730 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
USP8-212ENST00000560730 PDGFDQ9GZP0 370 aaPredicted RBP16.16■□□□□ 0.18
USP8-212ENST00000560730 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
USP8-212ENST00000560730 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
USP8-212ENST00000560730 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
USP8-212ENST00000560730 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
USP8-212ENST00000560730 FCHSD2O94868 740 aa16.15■□□□□ 0.18
USP8-212ENST00000560730 CABP4P57796 275 aa16.15■□□□□ 0.18
USP8-212ENST00000560730 SLC15A2Q16348 729 aa16.15■□□□□ 0.18
USP8-212ENST00000560730 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
USP8-212ENST00000560730 SMARCC1Q92922 1105 aaPredicted RBP16.15■□□□□ 0.18
USP8-212ENST00000560730 STK32BQ9NY57 414 aa16.15■□□□□ 0.18
USP8-212ENST00000560730 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.17
USP8-212ENST00000560730 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms