RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 RALBP1Q15311 655 aa22.71■■□□□ 1.23
RPL28-209ENST00000560055 KDRP35968 1356 aa22.71■■□□□ 1.23
RPL28-209ENST00000560055 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
RPL28-209ENST00000560055 DIAPH1O60610 1272 aaKnown RBP22.7■■□□□ 1.22
RPL28-209ENST00000560055 ZCRB1Q8TBF4 217 aaKnown RBP22.7■■□□□ 1.22
RPL28-209ENST00000560055 SHANK3Q9BYB0 1731 aa22.7■■□□□ 1.22
RPL28-209ENST00000560055 AEBP1Q8IUX7 1158 aa22.68■■□□□ 1.22
RPL28-209ENST00000560055 TNS1Q9HBL0 1735 aaKnown RBP22.68■■□□□ 1.22
RPL28-209ENST00000560055 BAG6P46379 1132 aa22.67■■□□□ 1.22
RPL28-209ENST00000560055 PKD1L3Q7Z443 1732 aa22.67■■□□□ 1.22
RPL28-209ENST00000560055 EN1Q05925 392 aaPredicted RBP22.66■■□□□ 1.22
RPL28-209ENST00000560055 SULT6B1Q6IMI4 303 aa22.66■■□□□ 1.22
RPL28-209ENST00000560055 CFAP53Q96M91 514 aa22.66■■□□□ 1.22
RPL28-209ENST00000560055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.66■■□□□ 1.22
RPL28-209ENST00000560055 PRKRIP1Q9H875 184 aaPredicted RBP22.65■■□□□ 1.22
RPL28-209ENST00000560055 PCDH11XQ9BZA7 1347 aa22.64■■□□□ 1.22
RPL28-209ENST00000560055 PCDH11YQ9BZA8 1340 aa22.64■■□□□ 1.22
RPL28-209ENST00000560055 TRIM37O94972 964 aa22.64■■□□□ 1.21
RPL28-209ENST00000560055 DDX54Q8TDD1 881 aaKnown RBP22.64■■□□□ 1.21
RPL28-209ENST00000560055 SBF2Q86WG5 1849 aa22.64■■□□□ 1.21
RPL28-209ENST00000560055 MYBBP1AQ9BQG0 1328 aaKnown RBP22.62■■□□□ 1.21
RPL28-209ENST00000560055 CYP27B1O15528 508 aa22.62■■□□□ 1.21
RPL28-209ENST00000560055 SPG7Q9UQ90 795 aa22.61■■□□□ 1.21
RPL28-209ENST00000560055 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
RPL28-209ENST00000560055 HMOX1P09601 288 aa22.59■■□□□ 1.21
RPL28-209ENST00000560055 PTF1AQ7RTS3 328 aa22.59■■□□□ 1.21
RPL28-209ENST00000560055 BCL11BQ9C0K0 894 aaPredicted RBP22.59■■□□□ 1.21
RPL28-209ENST00000560055 U2SURPO15042 1029 aaKnown RBP22.58■■□□□ 1.21
RPL28-209ENST00000560055 EZH2Q15910 746 aaKnown RBP22.58■■□□□ 1.21
RPL28-209ENST00000560055 NHSQ6T4R5 1651 aa22.58■■□□□ 1.2
RPL28-209ENST00000560055 NKX1-1Q15270 411 aaPredicted RBP22.57■■□□□ 1.2
RPL28-209ENST00000560055 AMOTQ4VCS5 1084 aa22.57■■□□□ 1.2
RPL28-209ENST00000560055 NUDCQ9Y266 331 aa22.57■■□□□ 1.2
RPL28-209ENST00000560055 KCNQ2O43526 872 aa22.56■■□□□ 1.2
RPL28-209ENST00000560055 PLEKHO1Q53GL0 409 aaPredicted RBP22.56■■□□□ 1.2
RPL28-209ENST00000560055 APBA3O96018 575 aa22.55■■□□□ 1.2
RPL28-209ENST00000560055 PHKG2P15735 406 aa22.55■■□□□ 1.2
RPL28-209ENST00000560055 ACSBG1Q96GR2 724 aa22.55■■□□□ 1.2
RPL28-209ENST00000560055 CAMKK2Q96RR4 588 aa22.55■■□□□ 1.2
RPL28-209ENST00000560055 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
RPL28-209ENST00000560055 RSPH6AQ9H0K4 717 aa22.54■■□□□ 1.2
RPL28-209ENST00000560055 DOT1LQ8TEK3 1739 aa22.53■■□□□ 1.2
RPL28-209ENST00000560055 U2AF1L5P0DN76 240 aaPredicted RBP22.52■■□□□ 1.2
RPL28-209ENST00000560055 U2AF1Q01081 240 aaKnown RBP eCLIP22.52■■□□□ 1.2
RPL28-209ENST00000560055 PRIM1P49642 420 aaKnown RBP22.51■■□□□ 1.19
RPL28-209ENST00000560055 ZNF530Q6P9A1 599 aaPredicted RBP22.51■■□□□ 1.19
RPL28-209ENST00000560055 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
RPL28-209ENST00000560055 PLSCR1O15162 318 aa22.5■■□□□ 1.19
RPL28-209ENST00000560055 FCHSD2O94868 740 aa22.5■■□□□ 1.19
RPL28-209ENST00000560055 R3HDM1Q15032 1099 aaKnown RBP22.5■■□□□ 1.19
RPL28-209ENST00000560055 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
RPL28-209ENST00000560055 RGPD3A6NKT7 1758 aaPredicted RBP22.48■■□□□ 1.19
RPL28-209ENST00000560055 RGPD4Q7Z3J3 1758 aa22.48■■□□□ 1.19
RPL28-209ENST00000560055 PRKAR2BP31323 418 aa22.48■■□□□ 1.19
RPL28-209ENST00000560055 MTHFSDQ2M296 383 aaKnown RBP22.48■■□□□ 1.19
RPL28-209ENST00000560055 RREB1Q92766 1687 aa22.48■■□□□ 1.19
RPL28-209ENST00000560055 KDM6AO15550 1401 aaPredicted RBP22.48■■□□□ 1.19
RPL28-209ENST00000560055 BTAF1O14981 1849 aa22.47■■□□□ 1.19
RPL28-209ENST00000560055 HSP90AB1P08238 724 aaKnown RBP22.47■■□□□ 1.19
RPL28-209ENST00000560055 ANP32CO43423 234 aa22.46■■□□□ 1.19
RPL28-209ENST00000560055 AKAP4Q5JQC9 854 aa22.46■■□□□ 1.19
RPL28-209ENST00000560055 C1orf141Q5JVX7 400 aa22.46■■□□□ 1.19
RPL28-209ENST00000560055 SYTL4Q96C24 671 aaPredicted RBP22.46■■□□□ 1.19
RPL28-209ENST00000560055 DCAF5Q96JK2 942 aa22.46■■□□□ 1.19
RPL28-209ENST00000560055 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
RPL28-209ENST00000560055 NUP188Q5SRE5 1749 aa22.45■■□□□ 1.19
RPL28-209ENST00000560055 LRP5O75197 1615 aa22.44■■□□□ 1.18
RPL28-209ENST00000560055 PROM2Q8N271 834 aa22.43■■□□□ 1.18
RPL28-209ENST00000560055 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
RPL28-209ENST00000560055 PLEKHF1Q96S99 279 aa22.43■■□□□ 1.18
RPL28-209ENST00000560055 ITGB4P16144 1822 aa22.43■■□□□ 1.18
RPL28-209ENST00000560055 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
RPL28-209ENST00000560055 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
RPL28-209ENST00000560055 PIGBQ92521 554 aa22.41■■□□□ 1.18
RPL28-209ENST00000560055 ADAMTS7Q9UKP4 1686 aa22.41■■□□□ 1.18
RPL28-209ENST00000560055 CCDC184Q52MB2 194 aa22.39■■□□□ 1.17
RPL28-209ENST00000560055 TMOD3Q9NYL9 352 aa22.39■■□□□ 1.17
RPL28-209ENST00000560055 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
RPL28-209ENST00000560055 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
RPL28-209ENST00000560055 TXNRD1Q16881 649 aa22.38■■□□□ 1.17
RPL28-209ENST00000560055 MRC1P22897 1456 aa22.38■■□□□ 1.17
RPL28-209ENST00000560055 RNMTO43148 476 aaKnown RBP22.37■■□□□ 1.17
RPL28-209ENST00000560055 PNNQ9H307 717 aaKnown RBP22.37■■□□□ 1.17
RPL28-209ENST00000560055 LGR6Q9HBX8 967 aa22.37■■□□□ 1.17
RPL28-209ENST00000560055 GNAT3A8MTJ3 354 aa22.36■■□□□ 1.17
RPL28-209ENST00000560055 WDR43Q15061 677 aaKnown RBP eCLIP22.36■■□□□ 1.17
RPL28-209ENST00000560055 LY75O60449 1722 aa22.35■■□□□ 1.17
RPL28-209ENST00000560055 PALLDQ8WX93 1383 aa22.35■■□□□ 1.17
RPL28-209ENST00000560055 CABP4P57796 275 aa22.34■■□□□ 1.17
RPL28-209ENST00000560055 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
RPL28-209ENST00000560055 LRRC4BQ9NT99 713 aa22.34■■□□□ 1.17
RPL28-209ENST00000560055 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
RPL28-209ENST00000560055 CEMIPQ8WUJ3 1361 aa22.34■■□□□ 1.17
RPL28-209ENST00000560055 SLC27A3Q5K4L6 730 aa22.33■■□□□ 1.17
RPL28-209ENST00000560055 NBPF14Q5TI25 921 aa22.33■■□□□ 1.17
RPL28-209ENST00000560055 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.17
RPL28-209ENST00000560055 SMARCC1Q92922 1105 aaPredicted RBP22.33■■□□□ 1.17
RPL28-209ENST00000560055 SLC52A2Q9HAB3 445 aa22.33■■□□□ 1.17
RPL28-209ENST00000560055 ASAP1Q9ULH1 1129 aa22.33■■□□□ 1.17
RPL28-209ENST00000560055 NEFMP07197 916 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms