RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 HSPA1LP34931 641 aa18.46■□□□□ 0.55
RABGGTA-212ENST00000559974 GNAI1P63096 354 aa18.46■□□□□ 0.55
RABGGTA-212ENST00000559974 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-212ENST00000559974 IPO8O15397 1037 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-212ENST00000559974 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-212ENST00000559974 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-212ENST00000559974 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
RABGGTA-212ENST00000559974 ZNF853P0CG23 659 aa18.44■□□□□ 0.54
RABGGTA-212ENST00000559974 ABCA3Q99758 1704 aa18.44■□□□□ 0.54
RABGGTA-212ENST00000559974 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
RABGGTA-212ENST00000559974 PHRF1Q9P1Y6 1649 aaKnown RBP18.44■□□□□ 0.54
RABGGTA-212ENST00000559974 ITPRIPQ8IWB1 547 aa18.42■□□□□ 0.54
RABGGTA-212ENST00000559974 DDRGK1Q96HY6 314 aa18.42■□□□□ 0.54
RABGGTA-212ENST00000559974 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 NFAT5O94916 1531 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 VAMP4O75379 141 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 TMEM57Q8N5G2 664 aa18.41■□□□□ 0.54
RABGGTA-212ENST00000559974 USP19O94966 1318 aa18.4■□□□□ 0.54
RABGGTA-212ENST00000559974 SLIT3O75094 1523 aa18.4■□□□□ 0.54
RABGGTA-212ENST00000559974 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
RABGGTA-212ENST00000559974 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.53
RABGGTA-212ENST00000559974 LTN1O94822 1766 aa18.39■□□□□ 0.53
RABGGTA-212ENST00000559974 PDZRN3Q9UPQ7 1066 aa18.39■□□□□ 0.53
RABGGTA-212ENST00000559974 ARHGEF10O15013 1369 aa18.38■□□□□ 0.53
RABGGTA-212ENST00000559974 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
RABGGTA-212ENST00000559974 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-212ENST00000559974 COL22A1Q8NFW1 1626 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-212ENST00000559974 MAP3K19Q56UN5 1328 aa18.38■□□□□ 0.53
RABGGTA-212ENST00000559974 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 TSPYL6Q8N831 410 aa18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 FLT4P35916 1363 aa18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 ZBTB7CA1YPR0 619 aa18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 GCP02774 474 aa18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 ZC3H6P61129 1189 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-212ENST00000559974 TWISTNBQ3B726 338 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-212ENST00000559974 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
RABGGTA-212ENST00000559974 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
RABGGTA-212ENST00000559974 DCTN1Q14203 1278 aa18.35■□□□□ 0.53
RABGGTA-212ENST00000559974 RGPD5Q99666 1765 aa18.34■□□□□ 0.53
RABGGTA-212ENST00000559974 NUTM2BA6NNL0 878 aaPredicted RBP18.33■□□□□ 0.53
RABGGTA-212ENST00000559974 NUTM2EB1AL46 878 aaPredicted RBP18.33■□□□□ 0.53
RABGGTA-212ENST00000559974 NUTM2AQ8IVF1 878 aaPredicted RBP18.33■□□□□ 0.53
RABGGTA-212ENST00000559974 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.53
RABGGTA-212ENST00000559974 ELL2O00472 640 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-212ENST00000559974 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
RABGGTA-212ENST00000559974 KDRP35968 1356 aa18.32■□□□□ 0.52
RABGGTA-212ENST00000559974 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
RABGGTA-212ENST00000559974 LRP6O75581 1613 aa18.31■□□□□ 0.52
RABGGTA-212ENST00000559974 AMPHP49418 695 aa18.31■□□□□ 0.52
RABGGTA-212ENST00000559974 FBXO41Q8TF61 875 aa18.31■□□□□ 0.52
RABGGTA-212ENST00000559974 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-212ENST00000559974 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
RABGGTA-212ENST00000559974 COL18A1P39060 1754 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 SMC5Q8IY18 1101 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 ABCC4O15439 1325 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 JCADQ9P266 1359 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 ADAMTS2O95450 1211 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
RABGGTA-212ENST00000559974 CHL1O00533 1208 aa18.29■□□□□ 0.52
RABGGTA-212ENST00000559974 MCM10Q7L590 875 aa18.29■□□□□ 0.52
RABGGTA-212ENST00000559974 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
RABGGTA-212ENST00000559974 HAP1P54257 671 aaPredicted RBP18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 NBR1Q14596 966 aa18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 KCNH5Q8NCM2 988 aa18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 API5Q9BZZ5 524 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 CRB1P82279 1406 aa18.28■□□□□ 0.52
RABGGTA-212ENST00000559974 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.51
RABGGTA-212ENST00000559974 HOXC9P31274 260 aa18.26■□□□□ 0.51
RABGGTA-212ENST00000559974 EYA1Q99502 592 aa18.26■□□□□ 0.51
RABGGTA-212ENST00000559974 SEC24BO95487 1268 aa18.26■□□□□ 0.51
RABGGTA-212ENST00000559974 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
RABGGTA-212ENST00000559974 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-212ENST00000559974 LTV1Q96GA3 475 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-212ENST00000559974 DAXXQ9UER7 740 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-212ENST00000559974 LRRC37A3O60309 1634 aa18.25■□□□□ 0.51
RABGGTA-212ENST00000559974 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
RABGGTA-212ENST00000559974 CAMTA1Q9Y6Y1 1673 aa18.24■□□□□ 0.51
RABGGTA-212ENST00000559974 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
RABGGTA-212ENST00000559974 CPDO75976 1380 aa18.23■□□□□ 0.51
RABGGTA-212ENST00000559974 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-212ENST00000559974 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
RABGGTA-212ENST00000559974 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
RABGGTA-212ENST00000559974 NUCB1Q02818 461 aa18.22■□□□□ 0.51
RABGGTA-212ENST00000559974 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
RABGGTA-212ENST00000559974 IP6K1Q92551 441 aa18.22■□□□□ 0.51
RABGGTA-212ENST00000559974 UPF2Q9HAU5 1272 aaKnown RBP18.21■□□□□ 0.51
RABGGTA-212ENST00000559974 RGS12O14924 1447 aa18.2■□□□□ 0.5
RABGGTA-212ENST00000559974 SLC4A3P48751 1232 aa18.2■□□□□ 0.5
RABGGTA-212ENST00000559974 C1orf115Q9H7X2 142 aa18.2■□□□□ 0.5
RABGGTA-212ENST00000559974 HTATSF1O43719 755 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-212ENST00000559974 RTL5Q5HYW3 569 aaPredicted RBP18.19■□□□□ 0.5
RABGGTA-212ENST00000559974 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
RABGGTA-212ENST00000559974 COL14A1Q05707 1796 aaKnown RBP18.19■□□□□ 0.5
RABGGTA-212ENST00000559974 USHBP1Q8N6Y0 703 aa18.19■□□□□ 0.5
RABGGTA-212ENST00000559974 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms