RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
TPM1-221ENST00000559831 MTHFSDQ2M296 383 aaKnown RBP13.72□□□□□ -0.21
TPM1-221ENST00000559831 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
TPM1-221ENST00000559831 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
TPM1-221ENST00000559831 SPATA31A1Q5TZJ5 1347 aa13.71□□□□□ -0.21
TPM1-221ENST00000559831 SPATA31A5Q5VU36 1347 aa13.71□□□□□ -0.21
TPM1-221ENST00000559831 SPATA31A7Q8IWB4 1347 aa13.71□□□□□ -0.21
TPM1-221ENST00000559831 IL2RBP14784 551 aa13.71□□□□□ -0.21
TPM1-221ENST00000559831 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
TPM1-221ENST00000559831 VPS72Q15906 364 aa13.7□□□□□ -0.22
TPM1-221ENST00000559831 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
TPM1-221ENST00000559831 ZNF530Q6P9A1 599 aaPredicted RBP13.7□□□□□ -0.22
TPM1-221ENST00000559831 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
TPM1-221ENST00000559831 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
TPM1-221ENST00000559831 SPG7Q9UQ90 795 aa13.69□□□□□ -0.22
TPM1-221ENST00000559831 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 C1orf141Q5JVX7 400 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 WWC1Q8IX03 1113 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
TPM1-221ENST00000559831 GLI3P10071 1580 aa13.67□□□□□ -0.22
TPM1-221ENST00000559831 ATRNO75882 1429 aa13.67□□□□□ -0.22
TPM1-221ENST00000559831 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
TPM1-221ENST00000559831 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
TPM1-221ENST00000559831 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
TPM1-221ENST00000559831 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
TPM1-221ENST00000559831 THRAP3Q9Y2W1 955 aaKnown RBP13.67□□□□□ -0.22
TPM1-221ENST00000559831 LRRC37A3O60309 1634 aa13.67□□□□□ -0.22
TPM1-221ENST00000559831 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
TPM1-221ENST00000559831 SCN11AQ9UI33 1791 aa13.66□□□□□ -0.22
TPM1-221ENST00000559831 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
TPM1-221ENST00000559831 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
TPM1-221ENST00000559831 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
TPM1-221ENST00000559831 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
TPM1-221ENST00000559831 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
TPM1-221ENST00000559831 MCM10Q7L590 875 aa13.66□□□□□ -0.22
TPM1-221ENST00000559831 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
TPM1-221ENST00000559831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■■■■□ 19.9
TPM1-221ENST00000559831 ZNF521Q96K83 1311 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 A0A0G2JS52 829 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 MYT1Q01538 1121 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 GOLGA2Q08379 1002 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
TPM1-221ENST00000559831 QTRT2Q9H974 415 aaKnown RBP13.65□□□□□ -0.22
TPM1-221ENST00000559831 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.22
TPM1-221ENST00000559831 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
TPM1-221ENST00000559831 MPRIPQ6WCQ1 1025 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 IFNL2Q8IZJ0 200 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 DDX54Q8TDD1 881 aaKnown RBP13.64□□□□□ -0.23
TPM1-221ENST00000559831 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
TPM1-221ENST00000559831 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
TPM1-221ENST00000559831 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 EXOC5O00471 708 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 CYP27B1O15528 508 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
TPM1-221ENST00000559831 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
TPM1-221ENST00000559831 PHKG2P15735 406 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
TPM1-221ENST00000559831 LAS1LQ9Y4W2 734 aaKnown RBP13.63□□□□□ -0.23
TPM1-221ENST00000559831 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
TPM1-221ENST00000559831 DDB1Q16531 1140 aa13.62□□□□□ -0.23
TPM1-221ENST00000559831 ADAMTS7Q9UKP4 1686 aa13.62□□□□□ -0.23
TPM1-221ENST00000559831 RNMTO43148 476 aaKnown RBP13.61□□□□□ -0.23
TPM1-221ENST00000559831 HSP90AB1P08238 724 aaKnown RBP13.61□□□□□ -0.23
TPM1-221ENST00000559831 IL17REQ8NFR9 667 aa13.61□□□□□ -0.23
TPM1-221ENST00000559831 LGR6Q9HBX8 967 aa13.61□□□□□ -0.23
TPM1-221ENST00000559831 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
TPM1-221ENST00000559831 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
TPM1-221ENST00000559831 E9PSI1 815 aa13.6□□□□□ -0.23
TPM1-221ENST00000559831 KDM6AO15550 1401 aaPredicted RBP13.6□□□□□ -0.23
TPM1-221ENST00000559831 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
TPM1-221ENST00000559831 TOGARAM1Q9Y4F4 1720 aa13.6□□□□□ -0.23
TPM1-221ENST00000559831 IL16Q14005 1332 aa13.6□□□□□ -0.23
TPM1-221ENST00000559831 BRWD3Q6RI45 1802 aa13.6□□□□□ -0.23
TPM1-221ENST00000559831 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
TPM1-221ENST00000559831 ITGB4P16144 1822 aa13.59□□□□□ -0.23
TPM1-221ENST00000559831 GNAI1P63096 354 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 TEFQ10587 303 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
TPM1-221ENST00000559831 DCAF5Q96JK2 942 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 MYH16Q9H6N6 1097 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 IFT57Q9NWB7 429 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
TPM1-221ENST00000559831 RBM6P78332 1123 aaKnown RBP13.57□□□□□ -0.24
TPM1-221ENST00000559831 SEPT12Q8IYM1 358 aa13.57□□□□□ -0.24
TPM1-221ENST00000559831 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
TPM1-221ENST00000559831 CABP4P57796 275 aa13.56□□□□□ -0.24
TPM1-221ENST00000559831 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
TPM1-221ENST00000559831 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
TPM1-221ENST00000559831 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
TPM1-221ENST00000559831 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
TPM1-221ENST00000559831 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
TPM1-221ENST00000559831 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms