RNA–Protein interactions for RNA: ENST00000559554.5

CHRNA5-203, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA5, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-203ENST00000559554 C10orf71Q711Q0 1435 aa21.9■■□□□ 1.1
CHRNA5-203ENST00000559554 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
CHRNA5-203ENST00000559554 ARHGAP27Q6ZUM4 889 aa21.9■■□□□ 1.1
CHRNA5-203ENST00000559554 ABHD8Q96I13 439 aa21.9■■□□□ 1.1
CHRNA5-203ENST00000559554 CCNL1Q9UK58 526 aaPredicted RBP21.9■■□□□ 1.1
CHRNA5-203ENST00000559554 USP54Q70EL1 1684 aa21.89■■□□□ 1.1
CHRNA5-203ENST00000559554 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
CHRNA5-203ENST00000559554 TNRC6CQ9HCJ0 1690 aaKnown RBP21.88■■□□□ 1.09
CHRNA5-203ENST00000559554 TNRC18O15417 2968 aaPredicted RBP21.88■■□□□ 1.09
CHRNA5-203ENST00000559554 KIAA1551Q9HCM1 1747 aa21.88■■□□□ 1.09
CHRNA5-203ENST00000559554 RGS19P49795 217 aa21.87■■□□□ 1.09
CHRNA5-203ENST00000559554 C9orf131Q5VYM1 1079 aa21.87■■□□□ 1.09
CHRNA5-203ENST00000559554 IL2RBP14784 551 aa21.86■■□□□ 1.09
CHRNA5-203ENST00000559554 SYTL4Q96C24 671 aaPredicted RBP21.86■■□□□ 1.09
CHRNA5-203ENST00000559554 KDM2BQ8NHM5 1336 aa21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 PDE4DIPQ5VU43 2346 aa21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 C5P01031 1676 aa21.85■■□□□ 1.09
CHRNA5-203ENST00000559554 NSD2O96028 1365 aa21.84■■□□□ 1.09
CHRNA5-203ENST00000559554 PLEKHG2Q9H7P9 1386 aa21.84■■□□□ 1.09
CHRNA5-203ENST00000559554 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
CHRNA5-203ENST00000559554 TAF1LQ8IZX4 1826 aa21.83■■□□□ 1.09
CHRNA5-203ENST00000559554 SOX12O15370 315 aa21.83■■□□□ 1.09
CHRNA5-203ENST00000559554 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
CHRNA5-203ENST00000559554 KIF13BQ9NQT8 1826 aa21.82■■□□□ 1.08
CHRNA5-203ENST00000559554 ERBB3P21860 1342 aa21.81■■□□□ 1.08
CHRNA5-203ENST00000559554 FLAD1Q8NFF5 587 aa21.81■■□□□ 1.08
CHRNA5-203ENST00000559554 DDX54Q8TDD1 881 aaKnown RBP21.81■■□□□ 1.08
CHRNA5-203ENST00000559554 NLRP2Q9NX02 1062 aa21.8■■□□□ 1.08
CHRNA5-203ENST00000559554 AMIGO3Q86WK7 504 aa21.79■■□□□ 1.08
CHRNA5-203ENST00000559554 MKRN1Q9UHC7 482 aaKnown RBP21.79■■□□□ 1.08
CHRNA5-203ENST00000559554 SBF1O95248 1867 aa21.79■■□□□ 1.08
CHRNA5-203ENST00000559554 BRCA1P38398 1863 aaKnown RBP21.79■■□□□ 1.08
CHRNA5-203ENST00000559554 TOGARAM1Q9Y4F4 1720 aa21.78■■□□□ 1.08
CHRNA5-203ENST00000559554 ANKRD36BQ8N2N9 1353 aa21.78■■□□□ 1.08
CHRNA5-203ENST00000559554 CTCFP49711 727 aaPredicted RBP21.78■■□□□ 1.08
CHRNA5-203ENST00000559554 A0A0G2JLW4 131 aa21.77■■□□□ 1.08
CHRNA5-203ENST00000559554 CCDC85CA6NKD9 419 aa21.76■■□□□ 1.07
CHRNA5-203ENST00000559554 LBX1P52954 281 aa21.76■■□□□ 1.07
CHRNA5-203ENST00000559554 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
CHRNA5-203ENST00000559554 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
CHRNA5-203ENST00000559554 KCNH5Q8NCM2 988 aa21.75■■□□□ 1.07
CHRNA5-203ENST00000559554 NFAT5O94916 1531 aa21.74■■□□□ 1.07
CHRNA5-203ENST00000559554 FCHSD2O94868 740 aa21.73■■□□□ 1.07
CHRNA5-203ENST00000559554 RNF181Q9P0P0 153 aa21.72■■□□□ 1.07
CHRNA5-203ENST00000559554 AIDAQ96BJ3 306 aa21.71■■□□□ 1.07
CHRNA5-203ENST00000559554 C4BP0C0L5 1744 aa21.7■■□□□ 1.06
CHRNA5-203ENST00000559554 TGFB2P61812 414 aa21.7■■□□□ 1.06
CHRNA5-203ENST00000559554 MPHOSPH9Q99550 1183 aa21.7■■□□□ 1.06
CHRNA5-203ENST00000559554 USP47Q96K76 1375 aa21.7■■□□□ 1.06
CHRNA5-203ENST00000559554 PHF14O94880 888 aa21.69■■□□□ 1.06
CHRNA5-203ENST00000559554 VIRMAQ69YN4 1812 aaKnown RBP21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 DPEP1P16444 411 aa21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 CABP2Q9NPB3 220 aa21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 CREBZFQ9NS37 354 aa21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 CABP1Q9NZU7 370 aa21.67■■□□□ 1.06
CHRNA5-203ENST00000559554 VEGFAP15692 232 aaPredicted RBP21.66■■□□□ 1.06
CHRNA5-203ENST00000559554 KDM2AQ9Y2K7 1162 aa21.66■■□□□ 1.06
CHRNA5-203ENST00000559554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.65■■□□□ 1.06
CHRNA5-203ENST00000559554 WBP1LQ9NX94 342 aa21.64■■□□□ 1.05
CHRNA5-203ENST00000559554 LTN1O94822 1766 aa21.64■■□□□ 1.05
CHRNA5-203ENST00000559554 CNTNAP1P78357 1384 aa21.63■■□□□ 1.05
CHRNA5-203ENST00000559554 MMP10P09238 476 aa21.63■■□□□ 1.05
CHRNA5-203ENST00000559554 HSPA8P11142 646 aaKnown RBP21.63■■□□□ 1.05
CHRNA5-203ENST00000559554 ANKRD24Q8TF21 1146 aa21.63■■□□□ 1.05
CHRNA5-203ENST00000559554 AK7Q96M32 723 aa21.63■■□□□ 1.05
CHRNA5-203ENST00000559554 TTC21BQ7Z4L5 1316 aa21.61■■□□□ 1.05
CHRNA5-203ENST00000559554 KCNA3P22001 575 aa21.61■■□□□ 1.05
CHRNA5-203ENST00000559554 VEGFBP49765 207 aa21.59■■□□□ 1.05
CHRNA5-203ENST00000559554 DCAF5Q96JK2 942 aa21.58■■□□□ 1.05
CHRNA5-203ENST00000559554 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.04
CHRNA5-203ENST00000559554 GLTPD2A6NH11 291 aa21.57■■□□□ 1.04
CHRNA5-203ENST00000559554 POTECB2RU33 542 aa21.56■■□□□ 1.04
CHRNA5-203ENST00000559554 SSFA2P28290 1259 aa21.56■■□□□ 1.04
CHRNA5-203ENST00000559554 HMGB2P26583 209 aaKnown RBP21.55■■□□□ 1.04
CHRNA5-203ENST00000559554 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
CHRNA5-203ENST00000559554 CFAP44Q96MT7 982 aa21.55■■□□□ 1.04
CHRNA5-203ENST00000559554 PALLDQ8WX93 1383 aa21.55■■□□□ 1.04
CHRNA5-203ENST00000559554 NSD3Q9BZ95 1437 aa21.54■■□□□ 1.04
CHRNA5-203ENST00000559554 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
CHRNA5-203ENST00000559554 ZCRB1Q8TBF4 217 aaKnown RBP21.52■■□□□ 1.04
CHRNA5-203ENST00000559554 PIM2Q9P1W9 311 aa21.52■■□□□ 1.04
CHRNA5-203ENST00000559554 ZC3H4Q9UPT8 1303 aaKnown RBP21.51■■□□□ 1.03
CHRNA5-203ENST00000559554 DALRD3Q5D0E6 543 aaKnown RBP21.5■■□□□ 1.03
CHRNA5-203ENST00000559554 RGPD2P0DJD1 1756 aa21.5■■□□□ 1.03
CHRNA5-203ENST00000559554 TTC21AQ8NDW8 1320 aa21.5■■□□□ 1.03
CHRNA5-203ENST00000559554 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
CHRNA5-203ENST00000559554 RASSF7Q02833 373 aa21.49■■□□□ 1.03
CHRNA5-203ENST00000559554 CCDC87Q9NVE4 849 aa21.49■■□□□ 1.03
CHRNA5-203ENST00000559554 TIAM2Q8IVF5 1701 aa21.49■■□□□ 1.03
CHRNA5-203ENST00000559554 ITGB4P16144 1822 aa21.48■■□□□ 1.03
CHRNA5-203ENST00000559554 KDM6AO15550 1401 aaPredicted RBP21.48■■□□□ 1.03
CHRNA5-203ENST00000559554 CHADLQ6NUI6 762 aa21.48■■□□□ 1.03
CHRNA5-203ENST00000559554 MAP2P11137 1827 aaKnown RBP21.48■■□□□ 1.03
CHRNA5-203ENST00000559554 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
CHRNA5-203ENST00000559554 LINC00116Q8NCU8 138 aa21.46■■□□□ 1.03
CHRNA5-203ENST00000559554 POTEIP0CG38 1075 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms