RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
HMGN2P47-201ENST00000559378 KIF16BQ96L93 1317 aa7.23□□□□□ -1.25
HMGN2P47-201ENST00000559378 PABPN1LA6NDY0 278 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CCT2P78371 535 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CCDC70Q6NSX1 233 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 KRT77Q7Z794 578 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 POLR3CQ9BUI4 534 aaPredicted RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CGNQ9P2M7 1197 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 GOLGA6L22H0YM25 854 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRPC1P48995 793 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 DCTN1Q14203 1278 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 FILIP1Q7Z7B0 1213 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 SAMD3Q8N6K7 520 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 GOLGA1Q92805 767 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 NUCKS1Q9H1E3 243 aaKnown RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 PIF1Q9H611 641 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 UTP6Q9NYH9 597 aaKnown RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 ACAD8Q9UKU7 415 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 LDHAP00338 332 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 TPM3P06753 285 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FAM163BP0C2L3 166 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 NAT2P11245 290 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FOSL1P15407 271 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CLK1P49759 484 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 MARSP56192 900 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 WASHC5Q12768 1159 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 ALDH1L2Q3SY69 923 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 MAP9Q49MG5 647 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 LCA5Q86VQ0 697 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 RPUSD2Q8IZ73 545 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 NGDNQ8NEJ9 315 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC102AQ96A19 550 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FMNL2Q96PY5 1086 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHCHD3Q9NX63 227 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 ERICH4A6NGS2 130 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRIM64CA6NLI5 447 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 RECKO95980 971 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 U2AF1L5P0DN76 240 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 U2AF1Q01081 240 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 NFE2L2Q16236 605 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 CT47A1Q5JQC4 288 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 MFSD4BQ5TF39 518 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 IQCEQ6IPM2 695 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 C16orf87Q6PH81 154 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 EP400NLQ6ZTU2 488 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 IQCF2Q8IXL9 164 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHCHD4Q8N4Q1 142 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 MNS1Q8NEH6 495 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 STAG1Q8WVM7 1258 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 DHX38Q92620 1227 aaKnown RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 NCAPGQ9BPX3 1015 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 ALDH8A1Q9H2A2 487 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 VIL1P09327 827 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC175P0C221 793 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 SETSIPP0DME0 302 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 E2F5Q15329 346 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PPM1EQ8WY54 764 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 TTC14Q96N46 770 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CEP89Q96ST8 783 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 IFT57Q9NWB7 429 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF652Q9Y2D9 606 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHMP3Q9Y3E7 222 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 IL16Q14005 1332 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 STK25O00506 426 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 TPPPO94811 219 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 USP5P45974 858 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF132P52740 706 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 E2F4Q16254 413 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 LONRF1Q17RB8 773 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 FRS2Q8WU20 508 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 AGAP3Q96P47 875 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 DONSONQ9NYP3 566 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 KNSTRNQ9Y448 316 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 IFRD1O00458 451 aaPredicted RBP7.16□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCP110O43303 1012 aa7.16□□□□□ -1.26
HMGN2P47-201ENST00000559378 PPFIA3O75145 1194 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms